RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 SWI5Q1ZZU3 235 aa12.2□□□□□ -0.46
SS18-221ENST00000582448 KANK3Q6NY19 840 aa12.2□□□□□ -0.46
SS18-221ENST00000582448 PRRT2Q7Z6L0 340 aaPredicted RBP12.2□□□□□ -0.46
SS18-221ENST00000582448 RAB44Q7Z6P3 723 aaPredicted RBP12.2□□□□□ -0.46
SS18-221ENST00000582448 C7orf61Q8IZ16 206 aa12.2□□□□□ -0.46
SS18-221ENST00000582448 KCTD17Q8N5Z5 321 aa12.2□□□□□ -0.46
SS18-221ENST00000582448 DIS3LQ8TF46 1054 aaKnown RBP12.2□□□□□ -0.46
SS18-221ENST00000582448 RUFY2Q8WXA3 655 aa12.2□□□□□ -0.46
SS18-221ENST00000582448 COA7Q96BR5 231 aa12.2□□□□□ -0.46
SS18-221ENST00000582448 EAF2Q96CJ1 260 aaPredicted RBP12.2□□□□□ -0.46
SS18-221ENST00000582448 CCDC8Q9H0W5 538 aaPredicted RBP12.2□□□□□ -0.46
SS18-221ENST00000582448 ZMYND8Q9ULU4 1186 aaPredicted RBP12.2□□□□□ -0.46
SS18-221ENST00000582448 CEP290O15078 2479 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 DDTLA6NHG4 134 aaPredicted RBP12.19□□□□□ -0.46
SS18-221ENST00000582448 AMPD1P23109 780 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 MCCP23508 829 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 SPEM2Q0P670 501 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 ATP2B3Q16720 1220 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 GORABQ5T7V8 394 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 NECAB2Q7Z6G3 386 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 CCDC82Q8N4S0 544 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 PI4K2BQ8TCG2 481 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 EVI5LQ96CN4 794 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 NEUROD6Q96NK8 337 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 MDFIQ99750 246 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 DIAPH3Q9NSV4 1193 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 ABCF2Q9UG63 623 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 DENND2AQ9ULE3 1009 aa12.19□□□□□ -0.46
SS18-221ENST00000582448 TGFBR3LH3BV60 316 aa12.18□□□□□ -0.46
SS18-221ENST00000582448 SYN1P17600 705 aa12.18□□□□□ -0.46
SS18-221ENST00000582448 PHKA1P46020 1223 aa12.18□□□□□ -0.46
SS18-221ENST00000582448 RBM25P49756 843 aaKnown RBP12.18□□□□□ -0.46
SS18-221ENST00000582448 HIF1AQ16665 826 aa12.18□□□□□ -0.46
SS18-221ENST00000582448 KIAA1211Q6ZU35 1233 aa12.18□□□□□ -0.46
SS18-221ENST00000582448 ATG9AQ7Z3C6 839 aa12.18□□□□□ -0.46
SS18-221ENST00000582448 DZIP1Q86YF9 867 aaKnown RBP12.18□□□□□ -0.46
SS18-221ENST00000582448 LRFN2Q9ULH4 789 aa12.18□□□□□ -0.46
SS18-221ENST00000582448 A0A1W2PPC1 479 aa12.17□□□□□ -0.46
SS18-221ENST00000582448 CTNND1O60716 968 aaKnown RBP12.17□□□□□ -0.46
SS18-221ENST00000582448 ENTPD3O75355 529 aa12.17□□□□□ -0.46
SS18-221ENST00000582448 ATP5JP18859 108 aa12.17□□□□□ -0.46
SS18-221ENST00000582448 CHMLP26374 656 aa12.17□□□□□ -0.46
SS18-221ENST00000582448 GRNP28799 593 aaKnown RBP12.17□□□□□ -0.46
SS18-221ENST00000582448 TREML2Q5T2D2 321 aa12.17□□□□□ -0.46
SS18-221ENST00000582448 IER5Q5VY09 327 aa12.17□□□□□ -0.46
SS18-221ENST00000582448 LINC00114Q6XXX2 140 aa12.17□□□□□ -0.46
SS18-221ENST00000582448 CHSY3Q70JA7 882 aa12.17□□□□□ -0.46
SS18-221ENST00000582448 Q7L0L9 218 aa12.17□□□□□ -0.46
SS18-221ENST00000582448 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.17□□□□□ -0.46
SS18-221ENST00000582448 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.17□□□□□ -0.46
SS18-221ENST00000582448 DDX4Q9NQI0 724 aaKnown RBP12.17□□□□□ -0.46
SS18-221ENST00000582448 PAK6Q9NQU5 681 aaPredicted RBP12.17□□□□□ -0.46
SS18-221ENST00000582448 AGTPBP1Q9UPW5 1226 aa12.17□□□□□ -0.46
SS18-221ENST00000582448 EPB41L2O43491 1005 aaKnown RBP12.16□□□□□ -0.46
SS18-221ENST00000582448 MAP4K4O95819 1239 aaPredicted RBP12.16□□□□□ -0.46
SS18-221ENST00000582448 ADORA1P30542 326 aa12.16□□□□□ -0.46
SS18-221ENST00000582448 BTDP43251 543 aa12.16□□□□□ -0.46
SS18-221ENST00000582448 SPP2Q13103 211 aa12.16□□□□□ -0.46
SS18-221ENST00000582448 LRRFIP1Q32MZ4 808 aaKnown RBP12.16□□□□□ -0.46
SS18-221ENST00000582448 CCDC158Q5M9N0 1113 aa12.16□□□□□ -0.46
SS18-221ENST00000582448 DEFB123Q8N688 67 aa12.16□□□□□ -0.46
SS18-221ENST00000582448 VTI1AQ96AJ9 217 aa12.16□□□□□ -0.46
SS18-221ENST00000582448 MYO19Q96H55 970 aa12.16□□□□□ -0.46
SS18-221ENST00000582448 IDI2Q9BXS1 227 aa12.16□□□□□ -0.46
SS18-221ENST00000582448 SLC45A1Q9Y2W3 748 aa12.16□□□□□ -0.46
SS18-221ENST00000582448 SIN3BO75182 1162 aa12.15□□□□□ -0.46
SS18-221ENST00000582448 TIMM10P62072 90 aa12.15□□□□□ -0.46
SS18-221ENST00000582448 ZGPATQ8N5A5 531 aaKnown RBP12.15□□□□□ -0.46
SS18-221ENST00000582448 FSD1Q9BTV5 496 aa12.15□□□□□ -0.46
SS18-221ENST00000582448 DBNLQ9UJU6 430 aaKnown RBP12.15□□□□□ -0.46
SS18-221ENST00000582448 MKL2Q9ULH7 1088 aa12.15□□□□□ -0.46
SS18-221ENST00000582448 A0A1B0GUL7 405 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 CAPN2P17655 700 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 CYP2B6P20813 491 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 DGKGP49619 791 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 TTC39AQ5SRH9 613 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 CAPN12Q6ZSI9 719 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 TICAM2Q86XR7 235 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 HSCBQ8IWL3 235 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 GDF15Q99988 308 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 DBNDD2Q9BQY9 259 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 BOLA2Q9H3K6 86 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 C11orf49Q9H6J7 331 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 ANO2Q9NQ90 1003 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 TLR7Q9NYK1 1049 aaKnown RBP12.14□□□□□ -0.47
SS18-221ENST00000582448 ATRNL1Q5VV63 1379 aa12.14□□□□□ -0.47
SS18-221ENST00000582448 RPTORQ8N122 1335 aa12.13□□□□□ -0.47
SS18-221ENST00000582448 SALL1Q9NSC2 1324 aa12.13□□□□□ -0.47
SS18-221ENST00000582448 ELOA3CA0A087WX78 387 aaPredicted RBP12.13□□□□□ -0.47
SS18-221ENST00000582448 ELOA3DA6NLF2 546 aaPredicted RBP12.13□□□□□ -0.47
SS18-221ENST00000582448 HMGCRP04035 888 aa12.13□□□□□ -0.47
SS18-221ENST00000582448 BMP8BP34820 402 aa12.13□□□□□ -0.47
SS18-221ENST00000582448 MAGEA10P43363 369 aaPredicted RBP12.13□□□□□ -0.47
SS18-221ENST00000582448 HMGCS2P54868 508 aa12.13□□□□□ -0.47
SS18-221ENST00000582448 FAM110CQ1W6H9 321 aa12.13□□□□□ -0.47
SS18-221ENST00000582448 ELOA3BQ3SY89 546 aa12.13□□□□□ -0.47
SS18-221ENST00000582448 SPTY2D1Q68D10 685 aaPredicted RBP12.13□□□□□ -0.47
SS18-221ENST00000582448 ELOA3Q8NG57 546 aa12.13□□□□□ -0.47
SS18-221ENST00000582448 USP26Q9BXU7 913 aa12.13□□□□□ -0.47
SS18-221ENST00000582448 SUV39H2Q9H5I1 410 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms