RNA–Protein interactions for RNA: ENST00000582303.1

CDC42EP4-208, Transcript of CDC42 effector protein 4, humanhuman

TSL 5

Gene CDC42EP4, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-208ENST00000582303 PRDM6Q9NQX0 595 aa17.05■□□□□ 0.32
CDC42EP4-208ENST00000582303 TRMT13Q9NUP7 481 aaKnown RBP17.05■□□□□ 0.32
CDC42EP4-208ENST00000582303 DDX49Q9Y6V7 483 aaKnown RBP17.05■□□□□ 0.32
CDC42EP4-208ENST00000582303 ABCB11O95342 1321 aa17.04■□□□□ 0.32
CDC42EP4-208ENST00000582303 ASPRV1Q53RT3 343 aa17.04■□□□□ 0.32
CDC42EP4-208ENST00000582303 USP38Q8NB14 1042 aa17.04■□□□□ 0.32
CDC42EP4-208ENST00000582303 NSUN6Q8TEA1 469 aaKnown RBP17.04■□□□□ 0.32
CDC42EP4-208ENST00000582303 LNPKQ9C0E8 428 aa17.04■□□□□ 0.32
CDC42EP4-208ENST00000582303 DIAPH3Q9NSV4 1193 aa17.04■□□□□ 0.32
CDC42EP4-208ENST00000582303 CTNNA3Q9UI47 895 aa17.04■□□□□ 0.32
CDC42EP4-208ENST00000582303 CHD9Q3L8U1 2897 aa17.04■□□□□ 0.32
CDC42EP4-208ENST00000582303 KIF28PB7ZC32 967 aa17.03■□□□□ 0.32
CDC42EP4-208ENST00000582303 CYP2C9P11712 490 aa17.03■□□□□ 0.32
CDC42EP4-208ENST00000582303 SDSP20132 328 aa17.03■□□□□ 0.32
CDC42EP4-208ENST00000582303 MRPS5P82675 430 aaKnown RBP17.03■□□□□ 0.32
CDC42EP4-208ENST00000582303 NBPF20Q3BBV1 942 aa17.03■□□□□ 0.32
CDC42EP4-208ENST00000582303 USH1GQ495M9 461 aa17.03■□□□□ 0.32
CDC42EP4-208ENST00000582303 TMEM67Q5HYA8 995 aa17.03■□□□□ 0.32
CDC42EP4-208ENST00000582303 TMEM63BQ5T3F8 832 aa17.03■□□□□ 0.32
CDC42EP4-208ENST00000582303 PNMA1Q8ND90 353 aa17.03■□□□□ 0.32
CDC42EP4-208ENST00000582303 PHOSPHO2Q8TCD6 241 aa17.03■□□□□ 0.32
CDC42EP4-208ENST00000582303 SCLYQ96I15 445 aa17.03■□□□□ 0.32
CDC42EP4-208ENST00000582303 IWS1Q96ST2 819 aa17.03■□□□□ 0.32
CDC42EP4-208ENST00000582303 SLC9A7Q96T83 725 aa17.03■□□□□ 0.32
CDC42EP4-208ENST00000582303 MUC3AQ02505 3323 aa17.02■□□□□ 0.32
CDC42EP4-208ENST00000582303 TNFRSF10AO00220 468 aa17.02■□□□□ 0.32
CDC42EP4-208ENST00000582303 PARNO95453 639 aaKnown RBP17.02■□□□□ 0.32
CDC42EP4-208ENST00000582303 PTGS1P23219 599 aa17.02■□□□□ 0.32
CDC42EP4-208ENST00000582303 STXBP2Q15833 593 aa17.02■□□□□ 0.32
CDC42EP4-208ENST00000582303 IMMTQ16891 758 aaKnown RBP17.02■□□□□ 0.32
CDC42EP4-208ENST00000582303 TBC1D10CQ8IV04 446 aa17.02■□□□□ 0.32
CDC42EP4-208ENST00000582303 ASB2Q96Q27 587 aa17.02■□□□□ 0.32
CDC42EP4-208ENST00000582303 OSBPL3Q9H4L5 887 aa17.02■□□□□ 0.32
CDC42EP4-208ENST00000582303 CNNM2Q9H8M5 875 aa17.02■□□□□ 0.32
CDC42EP4-208ENST00000582303 YBX2Q9Y2T7 364 aaKnown RBP17.02■□□□□ 0.32
CDC42EP4-208ENST00000582303 MRPL11Q9Y3B7 192 aaKnown RBP17.02■□□□□ 0.32
CDC42EP4-208ENST00000582303 LRRC37A2A6NM11 1700 aa17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 GTPBP6O43824 516 aaPredicted RBP17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 DHX16O60231 1041 aaKnown RBP17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 GH1P01241 217 aa17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 CASTP20810 708 aaKnown RBP17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 TRAF1Q13077 416 aa17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 CDC37Q16543 378 aaPredicted RBP17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 AAK1Q2M2I8 961 aa17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 DEFB128Q7Z7B8 93 aa17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 CHD1LQ86WJ1 897 aa17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 SMC5Q8IY18 1101 aa17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 CAGE1Q8TC20 777 aa17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 ANKS1AQ92625 1134 aa17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 ZSCAN10Q96SZ4 725 aaPredicted RBP17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 UBAC1Q9BSL1 405 aa17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 KRT23Q9C075 422 aa17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 FTOQ9C0B1 505 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDC42EP4-208ENST00000582303 KDM4AO75164 1064 aa17■□□□□ 0.31
CDC42EP4-208ENST00000582303 BAIAP3O94812 1187 aa17■□□□□ 0.31
CDC42EP4-208ENST00000582303 PARP1P09874 1014 aaKnown RBP17■□□□□ 0.31
CDC42EP4-208ENST00000582303 IQCF3P0C7M6 154 aa17■□□□□ 0.31
CDC42EP4-208ENST00000582303 GOLGA8HP0CJ92 632 aa17■□□□□ 0.31
CDC42EP4-208ENST00000582303 ADGRE1Q14246 886 aa17■□□□□ 0.31
CDC42EP4-208ENST00000582303 CWC27Q6UX04 472 aaKnown RBP17■□□□□ 0.31
CDC42EP4-208ENST00000582303 AFAP1L1Q8TED9 768 aa17■□□□□ 0.31
CDC42EP4-208ENST00000582303 ZKSCAN3Q9BRR0 538 aa17■□□□□ 0.31
CDC42EP4-208ENST00000582303 DSCC1Q9BVC3 393 aa17■□□□□ 0.31
CDC42EP4-208ENST00000582303 KATNAL1Q9BW62 490 aa17■□□□□ 0.31
CDC42EP4-208ENST00000582303 UBA5Q9GZZ9 404 aa17■□□□□ 0.31
CDC42EP4-208ENST00000582303 NEDD4P46934 1319 aa16.99■□□□□ 0.31
CDC42EP4-208ENST00000582303 KCNJ6P48051 423 aa16.99■□□□□ 0.31
CDC42EP4-208ENST00000582303 RABGGTBP53611 331 aa16.99■□□□□ 0.31
CDC42EP4-208ENST00000582303 CCDC85BQ15834 202 aaPredicted RBP16.99■□□□□ 0.31
CDC42EP4-208ENST00000582303 PTGISQ16647 500 aa16.99■□□□□ 0.31
CDC42EP4-208ENST00000582303 DGKDQ16760 1214 aa16.99■□□□□ 0.31
CDC42EP4-208ENST00000582303 ARHGEF16Q5VV41 709 aa16.99■□□□□ 0.31
CDC42EP4-208ENST00000582303 B4GALNT3Q6L9W6 998 aa16.99■□□□□ 0.31
CDC42EP4-208ENST00000582303 SESTD1Q86VW0 696 aa16.99■□□□□ 0.31
CDC42EP4-208ENST00000582303 FBXO11Q86XK2 927 aa16.99■□□□□ 0.31
CDC42EP4-208ENST00000582303 ADGRF4Q8IZF3 695 aa16.99■□□□□ 0.31
CDC42EP4-208ENST00000582303 RMDN3Q96TC7 470 aa16.99■□□□□ 0.31
CDC42EP4-208ENST00000582303 MAP3K20Q9NYL2 800 aaKnown RBP16.99■□□□□ 0.31
CDC42EP4-208ENST00000582303 EIF3JO75822 258 aaKnown RBP16.98■□□□□ 0.31
CDC42EP4-208ENST00000582303 CHMP4BP1P59074 171 aa16.98■□□□□ 0.31
CDC42EP4-208ENST00000582303 CCDC62Q6P9F0 684 aa16.98■□□□□ 0.31
CDC42EP4-208ENST00000582303 SEPT14Q6ZU15 432 aa16.98■□□□□ 0.31
CDC42EP4-208ENST00000582303 SYTL5Q8TDW5 730 aaPredicted RBP16.98■□□□□ 0.31
CDC42EP4-208ENST00000582303 AFG1LQ8WV93 481 aa16.98■□□□□ 0.31
CDC42EP4-208ENST00000582303 CHD7Q9P2D1 2997 aa16.98■□□□□ 0.31
CDC42EP4-208ENST00000582303 CA3P07451 260 aa16.97■□□□□ 0.31
CDC42EP4-208ENST00000582303 MMP3P08254 477 aa16.97■□□□□ 0.31
CDC42EP4-208ENST00000582303 NUCB1Q02818 461 aa16.97■□□□□ 0.31
CDC42EP4-208ENST00000582303 LAMC2Q13753 1193 aa16.97■□□□□ 0.31
CDC42EP4-208ENST00000582303 IFIT1BQ5T764 474 aaKnown RBP16.97■□□□□ 0.31
CDC42EP4-208ENST00000582303 KCNV1Q6PIU1 500 aa16.97■□□□□ 0.31
CDC42EP4-208ENST00000582303 PLEKHM2Q8IWE5 1019 aa16.97■□□□□ 0.31
CDC42EP4-208ENST00000582303 SAMD3Q8N6K7 520 aa16.97■□□□□ 0.31
CDC42EP4-208ENST00000582303 C7orf31Q8N865 590 aa16.97■□□□□ 0.31
CDC42EP4-208ENST00000582303 ENAHQ8N8S7 591 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP4-208ENST00000582303 COPS5Q92905 334 aa16.97■□□□□ 0.31
CDC42EP4-208ENST00000582303 EMID1Q96A84 441 aaPredicted RBP16.97■□□□□ 0.31
CDC42EP4-208ENST00000582303 AMNQ9BXJ7 453 aa16.97■□□□□ 0.31
CDC42EP4-208ENST00000582303 B4E1Z4 1266 aa16.96■□□□□ 0.31
CDC42EP4-208ENST00000582303 EFCAB14O75071 495 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms