RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 KIAA0100Q14667 2235 aaKnown RBP17.32■□□□□ 0.36
MKS1-210ENST00000581180 RPTORQ8N122 1335 aa17.32■□□□□ 0.36
MKS1-210ENST00000581180 SYNGAP1Q96PV0 1343 aa17.32■□□□□ 0.36
MKS1-210ENST00000581180 XBP1P17861 261 aa17.32■□□□□ 0.36
MKS1-210ENST00000581180 EDNRBP24530 442 aa17.32■□□□□ 0.36
MKS1-210ENST00000581180 GALNT17Q6IS24 598 aa17.32■□□□□ 0.36
MKS1-210ENST00000581180 FAM184AQ8NB25 1140 aa17.32■□□□□ 0.36
MKS1-210ENST00000581180 NSUN6Q8TEA1 469 aaKnown RBP17.32■□□□□ 0.36
MKS1-210ENST00000581180 RMDN3Q96TC7 470 aa17.32■□□□□ 0.36
MKS1-210ENST00000581180 MCOLN1Q9GZU1 580 aa17.32■□□□□ 0.36
MKS1-210ENST00000581180 PXMP2Q9NR77 195 aa17.32■□□□□ 0.36
MKS1-210ENST00000581180 PCDHA4Q9UN74 947 aa17.32■□□□□ 0.36
MKS1-210ENST00000581180 CENPFP49454 3210 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 ASB14A6NK59 587 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 SNAI1O95863 264 aaPredicted RBP17.31■□□□□ 0.36
MKS1-210ENST00000581180 HMGCRP04035 888 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 TRIM32Q13049 653 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 AP3B2Q13367 1082 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 KRT40Q6A162 431 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 ARMCX2Q7L311 632 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 BLIDQ8IZY5 108 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 REXO1Q8N1G1 1221 aaKnown RBP17.31■□□□□ 0.36
MKS1-210ENST00000581180 BICD2Q8TD16 824 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 C8orf76Q96K31 380 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 PDCD2LQ9BRP1 358 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 TMEM260Q9NX78 707 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 BIN2Q9UBW5 565 aaPredicted RBP17.31■□□□□ 0.36
MKS1-210ENST00000581180 PCDHA6Q9UN73 950 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 PCDHA8Q9Y5H6 950 aa17.31■□□□□ 0.36
MKS1-210ENST00000581180 DDX49Q9Y6V7 483 aaKnown RBP17.31■□□□□ 0.36
MKS1-210ENST00000581180 FOSP01100 380 aaPredicted RBP17.3■□□□□ 0.36
MKS1-210ENST00000581180 MMP1P03956 469 aa17.3■□□□□ 0.36
MKS1-210ENST00000581180 EIF2AK2P19525 551 aaKnown RBP17.3■□□□□ 0.36
MKS1-210ENST00000581180 CYP2C19P33261 490 aa17.3■□□□□ 0.36
MKS1-210ENST00000581180 FOSBP53539 338 aa17.3■□□□□ 0.36
MKS1-210ENST00000581180 PGM5Q15124 567 aa17.3■□□□□ 0.36
MKS1-210ENST00000581180 COL13A1Q5TAT6 717 aaPredicted RBP17.3■□□□□ 0.36
MKS1-210ENST00000581180 MAP3K21Q5TCX8 1036 aa17.3■□□□□ 0.36
MKS1-210ENST00000581180 ARHGEF16Q5VV41 709 aa17.3■□□□□ 0.36
MKS1-210ENST00000581180 JAKMIP3Q5VZ66 844 aa17.3■□□□□ 0.36
MKS1-210ENST00000581180 FBXO18Q8NFZ0 1043 aa17.3■□□□□ 0.36
MKS1-210ENST00000581180 RASGRP4Q8TDF6 673 aa17.3■□□□□ 0.36
MKS1-210ENST00000581180 SH3TC2Q8TF17 1288 aa17.3■□□□□ 0.36
MKS1-210ENST00000581180 IWS1Q96ST2 819 aa17.3■□□□□ 0.36
MKS1-210ENST00000581180 KATNBL1Q9H079 304 aa17.3■□□□□ 0.36
MKS1-210ENST00000581180 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.3■□□□□ 0.36
MKS1-210ENST00000581180 FRMPD3Q5JV73 1810 aa17.29■□□□□ 0.36
MKS1-210ENST00000581180 SPDYE3A6NKU9 549 aa17.29■□□□□ 0.36
MKS1-210ENST00000581180 INHAP05111 366 aa17.29■□□□□ 0.36
MKS1-210ENST00000581180 NR3C2P08235 984 aa17.29■□□□□ 0.36
MKS1-210ENST00000581180 CACNB2Q08289 660 aaPredicted RBP17.29■□□□□ 0.36
MKS1-210ENST00000581180 SLC9C1Q4G0N8 1177 aa17.29■□□□□ 0.36
MKS1-210ENST00000581180 MFSD14CQ5VZR4 134 aa17.29■□□□□ 0.36
MKS1-210ENST00000581180 MCTP2Q6DN12 878 aa17.29■□□□□ 0.36
MKS1-210ENST00000581180 IL31RAQ8NI17 732 aa17.29■□□□□ 0.36
MKS1-210ENST00000581180 ARMC5Q96C12 935 aa17.29■□□□□ 0.36
MKS1-210ENST00000581180 PGBD1Q96JS3 809 aa17.29■□□□□ 0.36
MKS1-210ENST00000581180 ANO3Q9BYT9 981 aa17.29■□□□□ 0.36
MKS1-210ENST00000581180 KIF3AQ9Y496 699 aa17.29■□□□□ 0.36
MKS1-210ENST00000581180 B4DLN1 442 aa17.28■□□□□ 0.36
MKS1-210ENST00000581180 CYBAP13498 195 aa17.28■□□□□ 0.36
MKS1-210ENST00000581180 GUCY1B3Q02153 619 aa17.28■□□□□ 0.36
MKS1-210ENST00000581180 TRIM29Q14134 588 aa17.28■□□□□ 0.36
MKS1-210ENST00000581180 VSIG10LQ86VR7 867 aa17.28■□□□□ 0.36
MKS1-210ENST00000581180 TRPV1Q8NER1 839 aa17.28■□□□□ 0.36
MKS1-210ENST00000581180 OXER1Q8TDS5 423 aa17.28■□□□□ 0.36
MKS1-210ENST00000581180 CRYGNQ8WXF5 182 aa17.28■□□□□ 0.36
MKS1-210ENST00000581180 TNFRSF25Q93038 417 aa17.28■□□□□ 0.36
MKS1-210ENST00000581180 FOXD4L1Q9NU39 408 aa17.28■□□□□ 0.36
MKS1-210ENST00000581180 NRBP1Q9UHY1 535 aa17.28■□□□□ 0.36
MKS1-210ENST00000581180 DOCK5Q9H7D0 1870 aa17.27■□□□□ 0.36
MKS1-210ENST00000581180 ZNF865P0CJ78 1059 aaPredicted RBP17.27■□□□□ 0.36
MKS1-210ENST00000581180 PRKAR2AP13861 404 aaKnown RBP17.27■□□□□ 0.36
MKS1-210ENST00000581180 KRT2P35908 639 aa17.27■□□□□ 0.36
MKS1-210ENST00000581180 SREBF1P36956 1147 aa17.27■□□□□ 0.36
MKS1-210ENST00000581180 UBXN2AP68543 259 aa17.27■□□□□ 0.36
MKS1-210ENST00000581180 MRPS9P82933 396 aaKnown RBP17.27■□□□□ 0.36
MKS1-210ENST00000581180 PRAMEF19Q5SWL8 479 aa17.27■□□□□ 0.36
MKS1-210ENST00000581180 DIS3L2Q8IYB7 885 aaKnown RBP17.27■□□□□ 0.36
MKS1-210ENST00000581180 ZNF333Q96JL9 665 aa17.27■□□□□ 0.36
MKS1-210ENST00000581180 MPHOSPH6Q99547 160 aaKnown RBP17.27■□□□□ 0.36
MKS1-210ENST00000581180 ABHD16BQ9H3Z7 469 aa17.27■□□□□ 0.36
MKS1-210ENST00000581180 BTBD18B2RXH4 712 aa17.26■□□□□ 0.35
MKS1-210ENST00000581180 EDIL3O43854 480 aa17.26■□□□□ 0.35
MKS1-210ENST00000581180 PDE4DQ08499 809 aa17.26■□□□□ 0.35
MKS1-210ENST00000581180 NR5A1Q13285 461 aa17.26■□□□□ 0.35
MKS1-210ENST00000581180 ACVR2BQ13705 512 aa17.26■□□□□ 0.35
MKS1-210ENST00000581180 BECN1Q14457 450 aa17.26■□□□□ 0.35
MKS1-210ENST00000581180 STXBP2Q15833 593 aa17.26■□□□□ 0.35
MKS1-210ENST00000581180 PCNX4Q63HM2 1172 aa17.26■□□□□ 0.35
MKS1-210ENST00000581180 XRRA1Q6P2D8 792 aa17.26■□□□□ 0.35
MKS1-210ENST00000581180 EHMT1Q9H9B1 1298 aa17.26■□□□□ 0.35
MKS1-210ENST00000581180 VTA1Q9NP79 307 aa17.26■□□□□ 0.35
MKS1-210ENST00000581180 CNPY2Q9Y2B0 182 aa17.26■□□□□ 0.35
MKS1-210ENST00000581180 EIF3JO75822 258 aaKnown RBP17.25■□□□□ 0.35
MKS1-210ENST00000581180 RGS20O76081 388 aa17.25■□□□□ 0.35
MKS1-210ENST00000581180 MYCLP12524 364 aaPredicted RBP17.25■□□□□ 0.35
MKS1-210ENST00000581180 CCND2P30279 289 aa17.25■□□□□ 0.35
MKS1-210ENST00000581180 CCND3P30281 292 aaPredicted RBP17.25■□□□□ 0.35
MKS1-210ENST00000581180 MTFR1Q15390 333 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms