RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 SCFD2Q8WU76 684 aa12.98□□□□□ -0.33
PPP4R1-218ENST00000580745 VWCEQ96DN2 955 aa12.98□□□□□ -0.33
PPP4R1-218ENST00000580745 PNMA2Q9UL42 364 aa12.98□□□□□ -0.33
PPP4R1-218ENST00000580745 RAD50Q92878 1312 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 LOC102724159A0A0B4J2E5 919 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 PALM3A6NDB9 673 aaPredicted RBP12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 KLRF2D3W0D1 207 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 E7EWF7 191 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 SGSM2O43147 1006 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 CFBP00751 764 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 EIF2AK2P19525 551 aaKnown RBP12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 DNAJB2P25686 324 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 ANTXR2P58335 489 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 PWP2Q15269 919 aaKnown RBP12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 NBPF20Q3BBV1 942 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 FAM47CQ5HY64 1035 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 RASIP1Q5U651 963 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 CCDC62Q6P9F0 684 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 HOMER1Q86YM7 354 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 ZFP91Q96JP5 570 aaPredicted RBP12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 RMDN3Q96TC7 470 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 MTG1Q9BT17 334 aaPredicted RBP12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 IL23AQ9NPF7 189 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 GPHNQ9NQX3 736 aaPredicted RBP12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 POLR3EQ9NVU0 708 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 MRPL11Q9Y3B7 192 aaKnown RBP12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 COL6A3P12111 3177 aa12.97□□□□□ -0.33
PPP4R1-218ENST00000580745 LRRC37A2A6NM11 1700 aa12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 A6NJR5 290 aa12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 IFIT3O14879 490 aaKnown RBP12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 SORBS3O60504 671 aa12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 HOXA13P31271 388 aaPredicted RBP12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 NT5C2P49902 561 aa12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 CPT1AP50416 773 aa12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 OTOP2Q7RTS6 562 aa12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 NSUN6Q8TEA1 469 aaKnown RBP12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 AFG1LQ8WV93 481 aa12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 PIBF1Q8WXW3 757 aa12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 MTMR8Q96EF0 704 aa12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 PIGSQ96S52 555 aa12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 PBX4Q9BYU1 374 aa12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 U3KPZ7 1027 aaPredicted RBP12.96□□□□□ -0.33
PPP4R1-218ENST00000580745 CYTH3O43739 400 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 ARHGAP1Q07960 439 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 TRDNQ13061 729 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 TTLL4Q14679 1199 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 GRM4Q14833 912 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 ARHGEF16Q5VV41 709 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 PSRC1Q6PGN9 363 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 MCF2L2Q86YR7 1114 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 MAFAQ8NHW3 353 aaPredicted RBP12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 IL31RAQ8NI17 732 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 RUFY2Q8WXA3 655 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 TIFAQ96CG3 184 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 MPHOSPH6Q99547 160 aaKnown RBP12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 MYL10Q9BUA6 226 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 AMNQ9BXJ7 453 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 ZNF576Q9H609 170 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 PXMP2Q9NR77 195 aa12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 RBM8AQ9Y5S9 174 aaKnown RBP12.95□□□□□ -0.34
PPP4R1-218ENST00000580745 MCM3APO60318 1980 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 LCTP09848 1927 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 ZBTB5O15062 677 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 NKRFO15226 690 aaKnown RBP eCLIP12.94□□□□□ -0.343e-11■■□□□ 12.2
PPP4R1-218ENST00000580745 FGBP02675 491 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 NR3C2P08235 984 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 MYCLP12524 364 aaPredicted RBP12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 FOSL2P15408 326 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 HSD17B4P51659 736 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 RABGGTBP53611 331 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 TROAPQ12815 778 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 STXBP2Q15833 593 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 DEFB128Q7Z7B8 93 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 RALYLQ86SE5 291 aaKnown RBP12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 MB21D2Q8IYB1 491 aaPredicted RBP12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 HERVK_113Q902F9 699 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 KAT2BQ92831 832 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 MAP4K1Q92918 833 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 DDX41Q9UJV9 622 aaKnown RBP12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 YBX2Q9Y2T7 364 aaKnown RBP12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 PCDHA1Q9Y5I3 950 aa12.94□□□□□ -0.34
PPP4R1-218ENST00000580745 B4DLN1 442 aa12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 RGS20O76081 388 aa12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 GH1P01241 217 aa12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 MMP3P08254 477 aa12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 MYOGP15173 224 aa12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 MRPL12P52815 198 aaKnown RBP12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 WTAPQ15007 396 aa12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 TMEM67Q5HYA8 995 aa12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 USP38Q8NB14 1042 aa12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 NCOA7Q8NI08 942 aa12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 IGDCC4Q8TDY8 1250 aa12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 GPKOWQ92917 476 aaPredicted RBP eCLIP12.93□□□□□ -0.344e-7■■□□□ 11.4
PPP4R1-218ENST00000580745 PDCD2LQ9BRP1 358 aa12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 NKX2-4Q9H2Z4 354 aa12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 RIOX1Q9H6W3 641 aa12.93□□□□□ -0.34
PPP4R1-218ENST00000580745 BRDTQ58F21 947 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms