RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 AFAP1L1Q8TED9 768 aa16.94■□□□□ 0.3
CSNK1D-213ENST00000580446 WDR11Q9BZH6 1224 aa16.94■□□□□ 0.3
CSNK1D-213ENST00000580446 ACAD9Q9H845 621 aa16.94■□□□□ 0.3
CSNK1D-213ENST00000580446 NOB1Q9ULX3 412 aaKnown RBP16.94■□□□□ 0.3
CSNK1D-213ENST00000580446 GRM6O15303 877 aa16.93■□□□□ 0.3
CSNK1D-213ENST00000580446 CXCL10P02778 98 aa16.93■□□□□ 0.3
CSNK1D-213ENST00000580446 CPT1AP50416 773 aa16.93■□□□□ 0.3
CSNK1D-213ENST00000580446 OS9Q13438 667 aaPredicted RBP16.93■□□□□ 0.3
CSNK1D-213ENST00000580446 IKBKEQ14164 716 aa16.93■□□□□ 0.3
CSNK1D-213ENST00000580446 MBTPS1Q14703 1052 aa16.93■□□□□ 0.3
CSNK1D-213ENST00000580446 LRRFIP1Q32MZ4 808 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-213ENST00000580446 TMEM105Q8N8V8 129 aa16.93■□□□□ 0.3
CSNK1D-213ENST00000580446 SP7Q8TDD2 431 aaPredicted RBP16.93■□□□□ 0.3
CSNK1D-213ENST00000580446 WNT8BQ93098 351 aa16.93■□□□□ 0.3
CSNK1D-213ENST00000580446 ISY1Q9ULR0 285 aaKnown RBP16.93■□□□□ 0.3
CSNK1D-213ENST00000580446 DNAH14Q0VDD8 3507 aa16.92■□□□□ 0.3
CSNK1D-213ENST00000580446 USP17L12C9JPN9 530 aa16.92■□□□□ 0.3
CSNK1D-213ENST00000580446 USP17L21D6R901 530 aa16.92■□□□□ 0.3
CSNK1D-213ENST00000580446 LGR5O75473 907 aa16.92■□□□□ 0.3
CSNK1D-213ENST00000580446 CKBP12277 381 aa16.92■□□□□ 0.3
CSNK1D-213ENST00000580446 NDUFV1P49821 464 aa16.92■□□□□ 0.3
CSNK1D-213ENST00000580446 HTRA4P83105 476 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-213ENST00000580446 MUM1L1Q5H9M0 696 aa16.92■□□□□ 0.3
CSNK1D-213ENST00000580446 CCDC17Q96LX7 622 aa16.92■□□□□ 0.3
CSNK1D-213ENST00000580446 YME1L1Q96TA2 773 aa16.92■□□□□ 0.3
CSNK1D-213ENST00000580446 ALAS1P13196 640 aa16.91■□□□□ 0.3
CSNK1D-213ENST00000580446 PDE6AP16499 860 aa16.91■□□□□ 0.3
CSNK1D-213ENST00000580446 SP100P23497 879 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-213ENST00000580446 KIAA2013Q8IYS2 634 aa16.91■□□□□ 0.3
CSNK1D-213ENST00000580446 CCDC155Q8N6L0 562 aa16.91■□□□□ 0.3
CSNK1D-213ENST00000580446 ZNF512BQ96KM6 892 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-213ENST00000580446 VTA1Q9NP79 307 aa16.91■□□□□ 0.3
CSNK1D-213ENST00000580446 HDAC5Q9UQL6 1122 aa16.91■□□□□ 0.3
CSNK1D-213ENST00000580446 EP300Q09472 2414 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-213ENST00000580446 ZNF532Q9HCE3 1301 aa16.91■□□□□ 0.3
CSNK1D-213ENST00000580446 ATRXP46100 2492 aa16.9■□□□□ 0.3
CSNK1D-213ENST00000580446 AMHP03971 560 aa16.9■□□□□ 0.3
CSNK1D-213ENST00000580446 ARP10275 920 aa16.9■□□□□ 0.3
CSNK1D-213ENST00000580446 CTNNB1P35222 781 aa16.9■□□□□ 0.3
CSNK1D-213ENST00000580446 RRP1P56182 461 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-213ENST00000580446 SLC9C2Q5TAH2 1124 aa16.9■□□□□ 0.3
CSNK1D-213ENST00000580446 TRAF7Q6Q0C0 670 aa16.9■□□□□ 0.3
CSNK1D-213ENST00000580446 NSMFQ6X4W1 530 aa16.9■□□□□ 0.3
CSNK1D-213ENST00000580446 CAGE1Q8TC20 777 aa16.9■□□□□ 0.3
CSNK1D-213ENST00000580446 TRERF1Q96PN7 1200 aa16.9■□□□□ 0.3
CSNK1D-213ENST00000580446 CFAP47Q6ZTR5 3102 aa16.9■□□□□ 0.3
CSNK1D-213ENST00000580446 COL9A2Q14055 689 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-213ENST00000580446 C12orf60Q5U649 245 aa16.89■□□□□ 0.29
CSNK1D-213ENST00000580446 C16orf86Q6ZW13 317 aa16.89■□□□□ 0.29
CSNK1D-213ENST00000580446 LRRC47Q8N1G4 583 aaKnown RBP16.89■□□□□ 0.29
CSNK1D-213ENST00000580446 MSLNLQ96KJ4 702 aa16.89■□□□□ 0.29
CSNK1D-213ENST00000580446 CLEC1BQ9P126 229 aa16.89■□□□□ 0.29
CSNK1D-213ENST00000580446 BARX2Q9UMQ3 279 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-213ENST00000580446 USP15Q9Y4E8 981 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-213ENST00000580446 CBX2Q14781 532 aaPredicted RBP16.88■□□□□ 0.29
CSNK1D-213ENST00000580446 ZNF618Q5T7W0 954 aa16.88■□□□□ 0.29
CSNK1D-213ENST00000580446 DBF4BQ8NFT6 615 aa16.88■□□□□ 0.29
CSNK1D-213ENST00000580446 EAF2Q96CJ1 260 aaPredicted RBP16.88■□□□□ 0.29
CSNK1D-213ENST00000580446 SMOC2Q9H3U7 446 aa16.88■□□□□ 0.29
CSNK1D-213ENST00000580446 MRS2Q9HD23 443 aa16.88■□□□□ 0.29
CSNK1D-213ENST00000580446 GPR108Q9NPR9 543 aa16.88■□□□□ 0.29
CSNK1D-213ENST00000580446 CYP39A1Q9NYL5 469 aa16.88■□□□□ 0.29
CSNK1D-213ENST00000580446 CLIP2Q9UDT6 1046 aa16.88■□□□□ 0.29
CSNK1D-213ENST00000580446 SCN10AQ9Y5Y9 1956 aa16.88■□□□□ 0.29
CSNK1D-213ENST00000580446 NCK2O43639 380 aa16.87■□□□□ 0.29
CSNK1D-213ENST00000580446 MBD4O95243 580 aa16.87■□□□□ 0.29
CSNK1D-213ENST00000580446 CHGBP05060 677 aa16.87■□□□□ 0.29
CSNK1D-213ENST00000580446 ZNF200P98182 395 aaPredicted RBP16.87■□□□□ 0.29
CSNK1D-213ENST00000580446 PTPN11Q06124 597 aaPredicted RBP16.87■□□□□ 0.29
CSNK1D-213ENST00000580446 ADAM15Q13444 863 aa16.87■□□□□ 0.29
CSNK1D-213ENST00000580446 PTPN21Q16825 1174 aa16.87■□□□□ 0.29
CSNK1D-213ENST00000580446 ADGRD2Q7Z7M1 963 aa16.87■□□□□ 0.29
CSNK1D-213ENST00000580446 ZBTB33Q86T24 672 aa16.87■□□□□ 0.29
CSNK1D-213ENST00000580446 RIPOR3Q96MK2 946 aa16.87■□□□□ 0.29
CSNK1D-213ENST00000580446 SAMD11Q96NU1 681 aa16.87■□□□□ 0.29
CSNK1D-213ENST00000580446 OSBPL7Q9BZF2 842 aa16.87■□□□□ 0.29
CSNK1D-213ENST00000580446 PKD1L2Q7Z442 2459 aa16.86■□□□□ 0.29
CSNK1D-213ENST00000580446 EFCAB14O75071 495 aa16.86■□□□□ 0.29
CSNK1D-213ENST00000580446 GNAI3P08754 354 aa16.86■□□□□ 0.29
CSNK1D-213ENST00000580446 OAZ1P54368 228 aa16.86■□□□□ 0.29
CSNK1D-213ENST00000580446 RBM10P98175 930 aaKnown RBP16.86■□□□□ 0.29
CSNK1D-213ENST00000580446 FEM1BQ9UK73 627 aa16.86■□□□□ 0.29
CSNK1D-213ENST00000580446 PCDHGC5Q9Y5F6 944 aa16.86■□□□□ 0.29
CSNK1D-213ENST00000580446 SPTBN2O15020 2390 aa16.85■□□□□ 0.29
CSNK1D-213ENST00000580446 TCRBV5S4A2TA0A5A2 114 aa16.85■□□□□ 0.29
CSNK1D-213ENST00000580446 TMEM232C9JQI7 657 aa16.85■□□□□ 0.29
CSNK1D-213ENST00000580446 EYA4O95677 639 aa16.85■□□□□ 0.29
CSNK1D-213ENST00000580446 TRIM71Q2Q1W2 868 aaKnown RBP16.85■□□□□ 0.29
CSNK1D-213ENST00000580446 SMRP1Q8NCR6 262 aa16.85■□□□□ 0.29
CSNK1D-213ENST00000580446 KCNG4Q8TDN1 519 aa16.85■□□□□ 0.29
CSNK1D-213ENST00000580446 TNNQ9UQP3 1299 aa16.85■□□□□ 0.29
CSNK1D-213ENST00000580446 ATG2AQ2TAZ0 1938 aa16.85■□□□□ 0.29
CSNK1D-213ENST00000580446 TRIP12Q14669 1992 aaPredicted RBP16.85■□□□□ 0.29
CSNK1D-213ENST00000580446 MAP1BP46821 2468 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 A6NJR5 290 aa16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 IGSF3O75054 1194 aa16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 SURF6O75683 361 aaKnown RBP16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 BCAR3O75815 825 aa16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 ARIH2O95376 493 aa16.84■□□□□ 0.29
CSNK1D-213ENST00000580446 ICAM3P32942 547 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms