RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 GINM1Q9NU53 330 aa14.35□□□□□ -0.11
CDK5RAP3-217ENST00000580287 SPTLC3Q9NUV7 552 aa14.35□□□□□ -0.11
CDK5RAP3-217ENST00000580287 SLC37A4O43826 429 aa14.35□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CUTAO60888 179 aa14.35□□□□□ -0.11
CDK5RAP3-217ENST00000580287 USP14P54578 494 aa14.35□□□□□ -0.11
CDK5RAP3-217ENST00000580287 ATP2C1P98194 919 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PTPN21Q16825 1174 aa14.35□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PP2D1A8MPX8 630 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 TRAPPC10P48553 1259 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 POTEDQ86YR6 584 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 DHX40Q8IX18 779 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CCPG1Q9ULG6 757 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PPP1R9AQ9ULJ8 1098 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CEP131Q9UPN4 1083 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 RIPK3Q9Y572 518 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 NFIBO00712 420 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 ALAS1P13196 640 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 GTF2F1P35269 517 aaKnown RBP eCLIP14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PNOCQ13519 176 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 RESP18Q5W5W9 173 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PPP1R18Q6NYC8 613 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 ANKRD13AQ8IZ07 590 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 CNNM3Q8NE01 707 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 KCNH3Q9ULD8 1083 aa14.34□□□□□ -0.11
CDK5RAP3-217ENST00000580287 A0A087X0B3 334 aa14.33□□□□□ -0.11
CDK5RAP3-217ENST00000580287 TPM3P06753 285 aa14.33□□□□□ -0.11
CDK5RAP3-217ENST00000580287 LONRF3Q496Y0 759 aa14.33□□□□□ -0.11
CDK5RAP3-217ENST00000580287 PURBQ96QR8 312 aaKnown RBP14.33□□□□□ -0.11
CDK5RAP3-217ENST00000580287 SLC38A10Q9HBR0 1119 aa14.33□□□□□ -0.11
CDK5RAP3-217ENST00000580287 TMOD4Q9NZQ9 345 aa14.33□□□□□ -0.11
CDK5RAP3-217ENST00000580287 USP27XA6NNY8 438 aa14.33□□□□□ -0.12
CDK5RAP3-217ENST00000580287 VWA5AO00534 786 aa14.33□□□□□ -0.12
CDK5RAP3-217ENST00000580287 FOXN1O15353 648 aa14.33□□□□□ -0.12
CDK5RAP3-217ENST00000580287 POLR2DO15514 142 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-217ENST00000580287 PLA2G6O60733 806 aa14.33□□□□□ -0.12
CDK5RAP3-217ENST00000580287 MUM1L1Q5H9M0 696 aa14.33□□□□□ -0.12
CDK5RAP3-217ENST00000580287 POTEEQ6S8J3 1075 aa14.33□□□□□ -0.12
CDK5RAP3-217ENST00000580287 GADL1Q6ZQY3 521 aa14.33□□□□□ -0.12
CDK5RAP3-217ENST00000580287 CYP2W1Q8TAV3 490 aa14.33□□□□□ -0.12
CDK5RAP3-217ENST00000580287 SYMPKQ92797 1274 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-217ENST00000580287 OPTNQ96CV9 577 aa14.33□□□□□ -0.12
CDK5RAP3-217ENST00000580287 ANO3Q9BYT9 981 aa14.33□□□□□ -0.12
CDK5RAP3-217ENST00000580287 RIOK3O14730 519 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-217ENST00000580287 GJA5P36382 358 aa14.32□□□□□ -0.12
CDK5RAP3-217ENST00000580287 DMTNQ08495 405 aa14.32□□□□□ -0.12
CDK5RAP3-217ENST00000580287 HPSEQ9Y251 543 aa14.32□□□□□ -0.12
CDK5RAP3-217ENST00000580287 C19orf81C9J6K1 198 aa14.32□□□□□ -0.12
CDK5RAP3-217ENST00000580287 ICAM1P05362 532 aa14.32□□□□□ -0.12
CDK5RAP3-217ENST00000580287 SLC30A10Q6XR72 485 aa14.32□□□□□ -0.12
CDK5RAP3-217ENST00000580287 GRAMD1CQ8IYS0 662 aa14.32□□□□□ -0.12
CDK5RAP3-217ENST00000580287 PLIN2Q99541 437 aa14.32□□□□□ -0.12
CDK5RAP3-217ENST00000580287 NEMFO60524 1076 aa14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 TXKP42681 527 aa14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 NLRP12P59046 1061 aa14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 CATSPERGQ6ZRH7 1159 aa14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 ERO1BQ86YB8 467 aa14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 KCTD17Q8N5Z5 321 aa14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 ZHX1Q9UKY1 873 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 DOCK1Q14185 1865 aa14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 ZSCAN20P17040 1043 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 TECP42680 631 aa14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 PLS1Q14651 629 aa14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 COG2Q14746 738 aa14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 NAA30Q147X3 362 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 UTP14CQ5TAP6 766 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 FAM177A1Q8N128 213 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 PIAS4Q8N2W9 510 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 C12orf42Q96LP6 360 aa14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 TIGD1Q96MW7 591 aa14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 COL20A1Q9P218 1284 aa14.31□□□□□ -0.12
CDK5RAP3-217ENST00000580287 SPDYE3A6NKU9 549 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 TMEM132BQ14DG7 1078 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 KRBA2Q6ZNG9 492 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 ARMC9Q7Z3E5 817 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 CLEC4DQ8WXI8 215 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 STAMQ92783 540 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 CTDP1Q9Y5B0 961 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 CELF2O95319 508 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 SMC2O95347 1197 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 CASP1P29466 404 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 DSG3P32926 999 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 HSP90AA4PQ58FG1 418 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 DTHD1Q6ZMT9 781 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 DHX58Q96C10 678 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 R3HDMLQ9H3Y0 253 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 TRMT1Q9NXH9 659 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 SERTAD1Q9UHV2 236 aa14.3□□□□□ -0.12
CDK5RAP3-217ENST00000580287 SPDYE5A6NIY4 337 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 FAM86B1E9PN63 330 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 GCOM1H8Y6P7 765 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 ZBED4O75132 1171 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 FAM86B2P0C5J1 330 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 POLR2MP0CAP2 368 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 TPM4P67936 248 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 ARHGAP4P98171 946 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 PPATQ06203 517 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 LDLRAD1Q5T700 205 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 SLC10A4Q96EP9 437 aa14.29□□□□□ -0.12
CDK5RAP3-217ENST00000580287 DDX25Q9UHL0 483 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms