RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 DYNC1LI2O43237 492 aaPredicted RBP12.59□□□□□ -0.39
NDEL1-208ENST00000580237 PQBP1O60828 265 aaKnown RBP12.59□□□□□ -0.39
NDEL1-208ENST00000580237 CPA1P15085 419 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 CASTP20810 708 aaKnown RBP12.59□□□□□ -0.39
NDEL1-208ENST00000580237 EDNRBP24530 442 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 HSD17B4P51659 736 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 BEX3Q00994 111 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 TTLL4Q14679 1199 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 FSCN1Q16658 493 aaKnown RBP12.59□□□□□ -0.39
NDEL1-208ENST00000580237 BRDTQ58F21 947 aaPredicted RBP12.59□□□□□ -0.39
NDEL1-208ENST00000580237 TAPT1Q6NXT6 567 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 TMTC3Q6ZXV5 915 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 FCHSD1Q86WN1 690 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 CMTR1Q8N1G2 835 aaKnown RBP12.59□□□□□ -0.39
NDEL1-208ENST00000580237 CCDC82Q8N4S0 544 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 FANCBQ8NB91 859 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 OR6J1Q8NGC5 347 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 TBC1D5Q92609 795 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 TAAR1Q96RJ0 339 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 LBHD1Q9BQE6 289 aaPredicted RBP12.59□□□□□ -0.39
NDEL1-208ENST00000580237 MAP3K20Q9NYL2 800 aaKnown RBP12.59□□□□□ -0.39
NDEL1-208ENST00000580237 COL20A1Q9P218 1284 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 COLQQ9Y215 455 aaPredicted RBP12.59□□□□□ -0.39
NDEL1-208ENST00000580237 DOCK5Q9H7D0 1870 aa12.59□□□□□ -0.39
NDEL1-208ENST00000580237 ASGR1P07306 291 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 MYCLP12524 364 aaPredicted RBP12.58□□□□□ -0.4
NDEL1-208ENST00000580237 SMARCA1P28370 1054 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 IRX5P78411 483 aaPredicted RBP12.58□□□□□ -0.4
NDEL1-208ENST00000580237 EXOSC10Q01780 885 aaKnown RBP12.58□□□□□ -0.4
NDEL1-208ENST00000580237 STXBP2Q15833 593 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 DUSP28Q4G0W2 176 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 SEPT14Q6ZU15 432 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 Q6ZUG5 572 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 HEATR3Q7Z4Q2 680 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 SRBD1Q8N5C6 995 aaKnown RBP12.58□□□□□ -0.4
NDEL1-208ENST00000580237 SAMD3Q8N6K7 520 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 KLHDC9Q8NEP7 349 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 SMARCC2Q8TAQ2 1214 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 BRF1Q92994 677 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 IWS1Q96ST2 819 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 PXMP2Q9NR77 195 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 GNEQ9Y223 722 aaKnown RBP12.58□□□□□ -0.4
NDEL1-208ENST00000580237 MROH7Q68CQ1 1323 aa12.58□□□□□ -0.4
NDEL1-208ENST00000580237 A0A0U1RQG5 324 aaPredicted RBP12.57□□□□□ -0.4
NDEL1-208ENST00000580237 hCG_1642624A0A1W2PR95 340 aa12.57□□□□□ -0.4
NDEL1-208ENST00000580237 OPLAHO14841 1288 aa12.57□□□□□ -0.4
NDEL1-208ENST00000580237 NKRFO15226 690 aaKnown RBP eCLIP12.57□□□□□ -0.4
NDEL1-208ENST00000580237 EPB41L2O43491 1005 aaKnown RBP12.57□□□□□ -0.4
NDEL1-208ENST00000580237 TXNP10599 105 aaKnown RBP12.57□□□□□ -0.4
NDEL1-208ENST00000580237 PTGS1P23219 599 aa12.57□□□□□ -0.4
NDEL1-208ENST00000580237 RPS6KB1P23443 525 aa12.57□□□□□ -0.4
NDEL1-208ENST00000580237 MAGEA10P43363 369 aaPredicted RBP12.57□□□□□ -0.4
NDEL1-208ENST00000580237 CPT1AP50416 773 aa12.57□□□□□ -0.4
NDEL1-208ENST00000580237 METAP2P50579 478 aaKnown RBP eCLIP12.57□□□□□ -0.4
NDEL1-208ENST00000580237 SNX17Q15036 470 aa12.57□□□□□ -0.4
NDEL1-208ENST00000580237 HABP4Q5JVS0 413 aaKnown RBP12.57□□□□□ -0.4
NDEL1-208ENST00000580237 CXCL17Q6UXB2 119 aa12.57□□□□□ -0.4
NDEL1-208ENST00000580237 BRPF3Q9ULD4 1205 aa12.57□□□□□ -0.4
NDEL1-208ENST00000580237 Q9Y3F1 56 aa12.57□□□□□ -0.4
NDEL1-208ENST00000580237 CNTNAP5Q8WYK1 1306 aa12.57□□□□□ -0.4
NDEL1-208ENST00000580237 CCDC196A0A1B0GTZ2 297 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 DCDC2CA8MYV0 355 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 EIF5BO60841 1220 aaKnown RBP12.56□□□□□ -0.4
NDEL1-208ENST00000580237 CABYRO75952 493 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 NR3C2P08235 984 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 CLTBP09497 229 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 CCND2P30279 289 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 RCAN1P53805 252 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 MDM2Q00987 491 aaPredicted RBP12.56□□□□□ -0.4
NDEL1-208ENST00000580237 GHRHRQ02643 423 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 TLE2Q04725 743 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 APOBRQ0VD83 1088 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 C1orf53Q5VUE5 145 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 CCSAPQ6IQ19 270 aaPredicted RBP12.56□□□□□ -0.4
NDEL1-208ENST00000580237 GPKOWQ92917 476 aaPredicted RBP eCLIP12.56□□□□□ -0.4
NDEL1-208ENST00000580237 KCNB2Q92953 911 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 PDCD2LQ9BRP1 358 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 UBE2OQ9C0C9 1292 aaKnown RBP12.56□□□□□ -0.4
NDEL1-208ENST00000580237 RBM27Q9P2N5 1060 aaKnown RBP12.56□□□□□ -0.4
NDEL1-208ENST00000580237 MRVI1Q9Y6F6 885 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 ELP1O95163 1332 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 SCN10AQ9Y5Y9 1956 aa12.56□□□□□ -0.4
NDEL1-208ENST00000580237 RBM47A0AV96 593 aaKnown RBP12.55□□□□□ -0.4
NDEL1-208ENST00000580237 TLR3O15455 904 aaKnown RBP12.55□□□□□ -0.4
NDEL1-208ENST00000580237 EIF3JO75822 258 aaKnown RBP12.55□□□□□ -0.4
NDEL1-208ENST00000580237 GH1P01241 217 aa12.55□□□□□ -0.4
NDEL1-208ENST00000580237 MYL3P08590 195 aa12.55□□□□□ -0.4
NDEL1-208ENST00000580237 NAPAP54920 295 aa12.55□□□□□ -0.4
NDEL1-208ENST00000580237 PGM5Q15124 567 aa12.55□□□□□ -0.4
NDEL1-208ENST00000580237 TMEM63BQ5T3F8 832 aa12.55□□□□□ -0.4
NDEL1-208ENST00000580237 PDLIM7Q9NR12 457 aa12.55□□□□□ -0.4
NDEL1-208ENST00000580237 POLR3EQ9NVU0 708 aa12.55□□□□□ -0.4
NDEL1-208ENST00000580237 CYP46A1Q9Y6A2 500 aa12.55□□□□□ -0.4
NDEL1-208ENST00000580237 SPDYE3A6NKU9 549 aa12.54□□□□□ -0.4
NDEL1-208ENST00000580237 CTAGE5O15320 804 aa12.54□□□□□ -0.4
NDEL1-208ENST00000580237 CHMP4BP1P59074 171 aa12.54□□□□□ -0.4
NDEL1-208ENST00000580237 NKX3-2P78367 333 aa12.54□□□□□ -0.4
NDEL1-208ENST00000580237 AKAP17AQ02040 695 aaKnown RBP12.54□□□□□ -0.4
NDEL1-208ENST00000580237 GNPTABQ3T906 1256 aa12.54□□□□□ -0.4
NDEL1-208ENST00000580237 RUFY3Q7L099 469 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms