RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 HAUS7Q99871 368 aa11.04□□□□□ -0.64
SMARCD2-208ENST00000580054 RCAN3Q9UKA8 241 aa11.04□□□□□ -0.64
SMARCD2-208ENST00000580054 CACNA1AO00555 2505 aa11.04□□□□□ -0.64
SMARCD2-208ENST00000580054 RBM47A0AV96 593 aaKnown RBP11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 NFIBO00712 420 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 FDX1P10109 184 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 MCCP23508 829 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 BAATQ14032 418 aaPredicted RBP11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 PTGISQ16647 500 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 LRRFIP1Q32MZ4 808 aaKnown RBP11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 GDF6Q6KF10 455 aaPredicted RBP11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 CNKSR3Q6P9H4 555 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 SLC30A10Q6XR72 485 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 EP400NLQ6ZTU2 488 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 FAM160B2Q86V87 743 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 FBXO22Q8NEZ5 403 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 AFAP1L1Q8TED9 768 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 STAG1Q8WVM7 1258 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 STRBPQ96SI9 672 aaKnown RBP11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 RAD9AQ99638 391 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 MUTYHQ9UIF7 546 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 CCPG1Q9ULG6 757 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 PRR12Q9ULL5 1215 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 RALGAPA2Q2PPJ7 1873 aa11.03□□□□□ -0.64
SMARCD2-208ENST00000580054 KIAA1217Q5T5P2 1943 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 C19orf67A6NJJ6 358 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 A6NJR5 290 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 RAB11FIP3O75154 756 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 ARIH2O95376 493 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 CXCL10P02778 98 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 NEFLP07196 543 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 SELPP16109 830 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 ATP5JP18859 108 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 IRS1P35568 1242 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 SLC1A4P43007 532 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 PTPN11Q06124 597 aaPredicted RBP11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 PPP2R5BQ15173 497 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 PUS10Q3MIT2 529 aaKnown RBP11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 TCEAL5Q5H9L2 206 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 IER5LQ5T953 404 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 SIRT2Q8IXJ6 389 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 ZNF444Q8N0Y2 327 aaPredicted RBP11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 CAGE1Q8TC20 777 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 MRPL38Q96DV4 380 aaKnown RBP11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 GMCL1Q96IK5 515 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 CRBNQ96SW2 442 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 SYNPO2Q9UMS6 1093 aa11.02□□□□□ -0.65
SMARCD2-208ENST00000580054 MS4A1P11836 297 aa11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 MBTPS1Q14703 1052 aa11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 TIGD5Q53EQ6 642 aa11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 ADHFE1Q8IWW8 467 aa11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 CCDC155Q8N6L0 562 aa11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 NEDD1Q8NHV4 660 aa11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 CHURC1Q8WUH1 139 aa11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 WNT8BQ93098 351 aa11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 PABPC5Q96DU9 382 aaKnown RBP11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 DDX19BQ9UMR2 479 aa11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 MTMR7Q9Y216 660 aa11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 PLXNA3P51805 1871 aa11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 RAD50Q92878 1312 aa11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 MYH7BA7E2Y1 1941 aa11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 ZFHX2Q9C0A1 2572 aaPredicted RBP11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 PTPRZ1P23471 2315 aaPredicted RBP11.01□□□□□ -0.65
SMARCD2-208ENST00000580054 ABHD14A-ACY1A0A1B0GW23 586 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 PTPDC1A2A3K4 754 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 ICAM1P05362 532 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 TSPY3P0CV98 308 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 TSPY8P0CW00 308 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 CKBP12277 381 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 CALML3P27482 149 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 TDO2P48775 406 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 RBL2Q08999 1139 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 COL19A1Q14993 1142 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 CLUL1Q15846 466 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 BRDTQ58F21 947 aaPredicted RBP11□□□□□ -0.65
SMARCD2-208ENST00000580054 ZSCAN25Q6NSZ9 544 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 TRAF7Q6Q0C0 670 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 BANK1Q8NDB2 785 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 KAT2BQ92831 832 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 OSBP2Q969R2 916 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 MFSD14AQ96MC6 490 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 ZBTB40Q9NUA8 1239 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 FAM86C1Q9NVL1 165 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 ADD3Q9UEY8 706 aaKnown RBP11□□□□□ -0.65
SMARCD2-208ENST00000580054 PRKAG3Q9UGI9 489 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 COL4A6Q14031 1691 aa11□□□□□ -0.65
SMARCD2-208ENST00000580054 M0R2C6 588 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 NKRFO15226 690 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 GPAA1O43292 621 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 ST18O60284 1047 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 NMT2O60551 498 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 KPNA6O60684 536 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 PLA2G6O60733 806 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 MMP3P08254 477 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 SLC16A2P36021 539 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 LTBRP36941 435 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 TFAP4Q01664 338 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 PDE4DQ08499 809 aa10.99□□□□□ -0.65
SMARCD2-208ENST00000580054 TCF15Q12870 199 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms