RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 NAPAP54920 295 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 SCRN1Q12765 414 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 STK3Q13188 491 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 RABEP1Q15276 862 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 CCDC144BQ3MJ40 725 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 ARHGEF16Q5VV41 709 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 TAPT1Q6NXT6 567 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 FBXO16Q8IX29 292 aaPredicted RBP11.55□□□□□ -0.56
MKS1-208ENST00000579358 TRIM22Q8IYM9 498 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 SMARCC2Q8TAQ2 1214 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 CCDC12Q8WUD4 166 aaPredicted RBP11.55□□□□□ -0.56
MKS1-208ENST00000579358 GPKOWQ92917 476 aaPredicted RBP eCLIP11.55□□□□□ -0.56
MKS1-208ENST00000579358 TBC1D32Q96NH3 1257 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 PDCD2LQ9BRP1 358 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 LARP6Q9BRS8 491 aaKnown RBP11.55□□□□□ -0.56
MKS1-208ENST00000579358 GLT8D2Q9H1C3 349 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 PSTPIP2Q9H939 334 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 XPNPEP3Q9NQH7 507 aa11.55□□□□□ -0.56
MKS1-208ENST00000579358 CENPFP49454 3210 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 ESYT2A0FGR8 921 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 NR3C2P08235 984 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 EIF2AK2P19525 551 aaKnown RBP11.54□□□□□ -0.56
MKS1-208ENST00000579358 MNX1P50219 401 aaPredicted RBP11.54□□□□□ -0.56
MKS1-208ENST00000579358 NKX3-2P78367 333 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 MLLT1Q03111 559 aaPredicted RBP11.54□□□□□ -0.56
MKS1-208ENST00000579358 TNFAIP2Q03169 654 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 PGM5Q15124 567 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 STXBP2Q15833 593 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 PKN1Q16512 942 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 IQSEC1Q6DN90 963 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 TYW1BQ6NUM6 668 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 EEPD1Q7L9B9 569 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 FAM177A1Q8N128 213 aaPredicted RBP11.54□□□□□ -0.56
MKS1-208ENST00000579358 ARRDC4Q8NCT1 418 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 PHKBQ93100 1093 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 SLC26A6Q9BXS9 759 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 BACH2Q9BYV9 841 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 RIC8AQ9NPQ8 531 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 Q9Y3F1 56 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 DDX49Q9Y6V7 483 aaKnown RBP11.54□□□□□ -0.56
MKS1-208ENST00000579358 STK36Q9NRP7 1315 aa11.54□□□□□ -0.56
MKS1-208ENST00000579358 PLXNA1Q9UIW2 1896 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 LCTP09848 1927 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 LRRC37A2A6NM11 1700 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.53□□□□□ -0.56
MKS1-208ENST00000579358 KBTBD13C9JR72 458 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 NKRFO15226 690 aaKnown RBP eCLIP11.53□□□□□ -0.56
MKS1-208ENST00000579358 ADCY6O43306 1168 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 ADAMTS4O75173 837 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 EIF3JO75822 258 aaKnown RBP11.53□□□□□ -0.56
MKS1-208ENST00000579358 STAM2O75886 525 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 DEXIO95424 95 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 CST5P28325 142 aaPredicted RBP11.53□□□□□ -0.56
MKS1-208ENST00000579358 ADCYAP1R1P41586 468 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 ADCY7P51828 1080 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 GJA9P57773 515 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 SSRP1Q08945 709 aaKnown RBP11.53□□□□□ -0.56
MKS1-208ENST00000579358 LRRC41Q15345 812 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 ME3Q16798 604 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 ANO1Q5XXA6 986 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 XRRA1Q6P2D8 792 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 USP17L6PQ6QN14 398 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 NECAB2Q7Z6G3 386 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 RNF180Q86T96 592 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 FCHSD1Q86WN1 690 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 CCDC148Q8NFR7 591 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 SCFD2Q8WU76 684 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 GTF3C6Q969F1 213 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 ZMYND12Q9H0C1 365 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 UPF3AQ9H1J1 476 aaKnown RBP11.53□□□□□ -0.56
MKS1-208ENST00000579358 C11orf49Q9H6J7 331 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 SPC25Q9HBM1 224 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 SH3GLB2Q9NR46 395 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 PDGFCQ9NRA1 345 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 GNEQ9Y223 722 aaKnown RBP11.53□□□□□ -0.56
MKS1-208ENST00000579358 SYNRGQ9UMZ2 1314 aa11.53□□□□□ -0.56
MKS1-208ENST00000579358 SMCO2A6NFE2 343 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 SPDYE3A6NKU9 549 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 LARGE1O95461 756 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 FOSP01100 380 aaPredicted RBP11.52□□□□□ -0.57
MKS1-208ENST00000579358 COL6A1P12109 1028 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 SMPD1P17405 629 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 CCND2P30279 289 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 CLK2P49760 499 aaKnown RBP11.52□□□□□ -0.57
MKS1-208ENST00000579358 AP3B2Q13367 1082 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 UBE2SQ16763 222 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 DUSP28Q4G0W2 176 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 MCTP2Q6DN12 878 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 NOL8Q76FK4 1167 aaKnown RBP11.52□□□□□ -0.57
MKS1-208ENST00000579358 TLK2Q86UE8 772 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 VSIG10LQ86VR7 867 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 DIS3LQ8TF46 1054 aaKnown RBP11.52□□□□□ -0.57
MKS1-208ENST00000579358 LENG1Q96BZ8 264 aaPredicted RBP11.52□□□□□ -0.57
MKS1-208ENST00000579358 PAWRQ96IZ0 340 aaKnown RBP11.52□□□□□ -0.57
MKS1-208ENST00000579358 TSEN34Q9BSV6 310 aaKnown RBP11.52□□□□□ -0.57
MKS1-208ENST00000579358 HTATIP2Q9BUP3 242 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 EHMT1Q9H9B1 1298 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 FOXD4L1Q9NU39 408 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 LIMCH1Q9UPQ0 1083 aa11.52□□□□□ -0.57
MKS1-208ENST00000579358 ZNFX1Q9P2E3 1918 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms