RNA–Protein interactions for RNA: ENST00000578996.1

CDK5RAP3-211, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-211ENST00000578996 MTG1Q9BT17 334 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ALDH8A1Q9H2A2 487 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 TRMT13Q9NUP7 481 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 MRPL11Q9Y3B7 192 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP3-211ENST00000578996 RBM47A0AV96 593 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ERICH2A1L162 156 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 GRXCR1A8MXD5 290 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 NKRFO15226 690 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ARIH2O95376 493 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 FGBP02675 491 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CYP2C9P11712 490 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 EIF2AK2P19525 551 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 EDNRBP24530 442 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ARHGEF16Q5VV41 709 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CHST3Q7LGC8 479 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 OTOP2Q7RTS6 562 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 RALYLQ86SE5 291 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 SYTL5Q8TDW5 730 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 NSUN6Q8TEA1 469 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 SCLYQ96I15 445 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 RMDN3Q96TC7 470 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 SEZ6LQ9BYH1 1024 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 MTIF3Q9H2K0 278 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 JMJD4Q9H9V9 463 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 IL23AQ9NPF7 189 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 COL20A1Q9P218 1284 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 U3KPZ7 1027 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CDH23Q9H251 3354 aa10.73□□□□□ -0.69
CDK5RAP3-211ENST00000578996 TMEM265A0A087WTH1 108 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ZBBXA8MT70 800 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 KLRF2D3W0D1 207 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 IFIT3O14879 490 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CYP21A2P08686 494 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 SUPT20HL2P0C7V6 817 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CHMLP26374 656 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 PBX2P40425 430 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 PTH1RQ03431 593 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 GRIN2CQ14957 1233 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 STXBP2Q15833 593 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 LY6KQ17RY6 165 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 NBPF20Q3BBV1 942 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 RGS22Q8NE09 1264 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 NOC4LQ9BVI4 516 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 AMNQ9BXJ7 453 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 PBX4Q9BYU1 374 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 WNT8AQ9H1J5 351 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 ZNF576Q9H609 170 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 NOD1Q9Y239 953 aa10.72□□□□□ -0.69
CDK5RAP3-211ENST00000578996 GH1P01241 217 aa10.71□□□□□ -0.69
CDK5RAP3-211ENST00000578996 WTAPQ15007 396 aa10.71□□□□□ -0.69
CDK5RAP3-211ENST00000578996 SART3Q15020 963 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-211ENST00000578996 SEC23AQ15436 765 aa10.71□□□□□ -0.69
CDK5RAP3-211ENST00000578996 DEFB128Q7Z7B8 93 aa10.71□□□□□ -0.69
CDK5RAP3-211ENST00000578996 RPUSD2Q8IZ73 545 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-211ENST00000578996 NCOA7Q8NI08 942 aa10.71□□□□□ -0.69
CDK5RAP3-211ENST00000578996 AFG1LQ8WV93 481 aa10.71□□□□□ -0.69
CDK5RAP3-211ENST00000578996 HERVK_113Q902F9 699 aa10.71□□□□□ -0.69
CDK5RAP3-211ENST00000578996 CXXC1Q9P0U4 656 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-211ENST00000578996 MAD2L2Q9UI95 211 aa10.71□□□□□ -0.69
CDK5RAP3-211ENST00000578996 MSRAQ9UJ68 235 aa10.71□□□□□ -0.69
CDK5RAP3-211ENST00000578996 MRVI1Q9Y6F6 885 aa10.71□□□□□ -0.69
CDK5RAP3-211ENST00000578996 A6NJR5 290 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 E7EWF7 191 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 ZBTB5O15062 677 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 SORBS3O60504 671 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 KPNA6O60684 536 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 MMP3P08254 477 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 MYCLP12524 364 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 HOXA13P31271 388 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 TMEM67Q5HYA8 995 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PIBF1Q8WXW3 757 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PPM1EQ8WY54 764 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PIGSQ96S52 555 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 IWS1Q96ST2 819 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 GAS2L1Q99501 681 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 SENP2Q9HC62 589 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PXMP2Q9NR77 195 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PCDHA1Q9Y5I3 950 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 TAF6LQ9Y6J9 622 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 EYSQ5T1H1 3165 aa10.7□□□□□ -0.7
CDK5RAP3-211ENST00000578996 UNC80Q8N2C7 3258 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PALM3A6NDB9 673 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 SGSM2O43147 1006 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PPP1R11O60927 126 aaPredicted RBP10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 NR3C2P08235 984 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 RABGGTBP53611 331 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 ARHGAP1Q07960 439 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 GRM4Q14833 912 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 RAB30Q15771 203 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 RASIP1Q5U651 963 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 NFRKBQ6P4R8 1299 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 CCDC62Q6P9F0 684 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 CATIPQ7Z7H3 387 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 RETREG2Q8NC44 543 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 MAF1Q9H063 256 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 NKX2-4Q9H2Z4 354 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 PRDM12Q9H4Q4 367 aa10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 RBM8AQ9Y5S9 174 aaKnown RBP10.69□□□□□ -0.7
CDK5RAP3-211ENST00000578996 SLC4A7Q9Y6M7 1214 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms