RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 ZFYP08048 801 aaPredicted RBP4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 NOS2P35228 1153 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 GSTO1P78417 241 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 SHROOM1Q2M3G4 852 aaPredicted RBP4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 TMEM259Q4ZIN3 620 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 LDLRAD1Q5T700 205 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 PRAMEF18Q5VWM3 479 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 MOB2Q70IA6 237 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 CDC37L1Q7L3B6 337 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 KRT26Q7Z3Y9 468 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 USP48Q86UV5 1035 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 SDR42E1Q8WUS8 393 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 TTC9Q92623 222 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 FBXL18Q96ME1 805 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 LPIN3Q9BQK8 851 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 FSD1Q9BTV5 496 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 BCL11AQ9H165 835 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 C7orf69Q9H7B7 122 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 DCP1AQ9NPI6 582 aaPredicted RBP4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 USP40Q9NVE5 1235 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 ZNF112Q9UJU3 913 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 FZD1Q9UP38 647 aa4.56□□□□□ -1.68
SMARCE1-215ENST00000578995 PLIN4Q96Q06 1357 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 CCDC171Q6TFL3 1326 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 RAD50Q92878 1312 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 MCM3APO60318 1980 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 CASP8AP2Q9UKL3 1982 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 WDR81Q562E7 1941 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 CYP2D7A0A087X1C5 515 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 FAM196BA6NMK8 535 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 SFI1A8K8P3 1242 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 FAM155AB1AL88 458 aaPredicted RBP4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 TMEM229AB2RXF0 380 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 SGSM2O43147 1006 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 USP2O75604 605 aaPredicted RBP4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 FGRP09769 529 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 CYP2D6P10635 497 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 SHMT1P34896 483 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 PLCD1P51178 756 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 RBM5P52756 815 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 C1QTNF8P60827 252 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 ALX1Q15699 326 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 UVSSAQ2YD98 709 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 SBK1Q52WX2 424 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 C12orf60Q5U649 245 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 ZSCAN25Q6NSZ9 544 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 SAPCD2Q86UD0 394 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 MAPKAPK5Q8IW41 473 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 TRIM42Q8IWZ5 723 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 TEX11Q8IYF3 940 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 PHTF2Q8N3S3 785 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 ZDHHC1Q8WTX9 485 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 TGFBRAP1Q8WUH2 860 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 DCPSQ96C86 337 aaKnown RBP4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 PNMA5Q96PV4 448 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 UBL7Q96S82 380 aaPredicted RBP4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 CEP41Q9BYV8 373 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 EHD4Q9H223 541 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 SRA1Q9HD15 236 aaKnown RBP4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 HELLSQ9NRZ9 838 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 GTF3C3Q9Y5Q9 886 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 TAF6LQ9Y6J9 622 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 BAZ2BQ9UIF8 2168 aaKnown RBP4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 ZNF236Q9UL36 1845 aa4.55□□□□□ -1.68
SMARCE1-215ENST00000578995 RASSF10A6NK89 507 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 BACH1O14867 736 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 MYO1BO43795 1136 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 FARP2O94887 1054 aaPredicted RBP4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 BAG3O95817 575 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 HSPD1P10809 573 aaKnown RBP4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 CPB1P15086 417 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 GUCY1A2P33402 732 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 NOVP48745 357 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 HTRA3P83110 453 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 PTH1RQ03431 593 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 TYRO3Q06418 890 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 TCP10Q12799 353 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 PICALMQ13492 652 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 MOGSQ13724 837 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 TNFAIP1Q13829 316 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 MCMDC2Q4G0Z9 681 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 NOL9Q5SY16 702 aaKnown RBP4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 TATDN1Q6P1N9 297 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 GIMAP6Q6P9H5 292 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 CTR9Q6PD62 1173 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 ELMSAN1Q6PJG2 1045 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 CERS3Q8IU89 383 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 TP53INP2Q8IXH6 220 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 IFNL3Q8IZI9 196 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 ARMC10Q8N2F6 343 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 AGGF1Q8N302 714 aaeCLIP4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 DNAJC5GQ8N7S2 189 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 SLC44A5Q8NCS7 719 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 SHKBP1Q8TBC3 707 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 RILPL2Q969X0 211 aa4.54□□□□□ -1.68
SMARCE1-215ENST00000578995 UTP4Q969X6 686 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms