RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 ARHGEF16Q5VV41 709 aa17.7■□□□□ 0.42
IFT20-208ENST00000578985 USP17L6PQ6QN14 398 aa17.7■□□□□ 0.42
IFT20-208ENST00000578985 SMARCC2Q8TAQ2 1214 aa17.7■□□□□ 0.42
IFT20-208ENST00000578985 ZHX1Q9UKY1 873 aaPredicted RBP17.7■□□□□ 0.42
IFT20-208ENST00000578985 SMCO2A6NFE2 343 aa17.69■□□□□ 0.42
IFT20-208ENST00000578985 MEIS2O14770 477 aa17.69■□□□□ 0.42
IFT20-208ENST00000578985 SEPT4O43236 478 aa17.69■□□□□ 0.42
IFT20-208ENST00000578985 DEXIO95424 95 aa17.69■□□□□ 0.42
IFT20-208ENST00000578985 EIF2AK2P19525 551 aaKnown RBP17.69■□□□□ 0.42
IFT20-208ENST00000578985 ADCY7P51828 1080 aa17.69■□□□□ 0.42
IFT20-208ENST00000578985 PDE4DQ08499 809 aa17.69■□□□□ 0.42
IFT20-208ENST00000578985 U2AF1L4Q8WU68 220 aaKnown RBP17.69■□□□□ 0.42
IFT20-208ENST00000578985 CCDC12Q8WUD4 166 aaPredicted RBP17.69■□□□□ 0.42
IFT20-208ENST00000578985 IWS1Q96ST2 819 aa17.69■□□□□ 0.42
IFT20-208ENST00000578985 KATNBL1Q9H079 304 aa17.69■□□□□ 0.42
IFT20-208ENST00000578985 RIC8AQ9NPQ8 531 aa17.69■□□□□ 0.42
IFT20-208ENST00000578985 PXMP2Q9NR77 195 aa17.69■□□□□ 0.42
IFT20-208ENST00000578985 SH2B1Q9NRF2 756 aaPredicted RBP17.69■□□□□ 0.42
IFT20-208ENST00000578985 DDX20Q9UHI6 824 aaKnown RBP17.69■□□□□ 0.42
IFT20-208ENST00000578985 FRMPD3Q5JV73 1810 aa17.69■□□□□ 0.42
IFT20-208ENST00000578985 STK36Q9NRP7 1315 aa17.69■□□□□ 0.42
IFT20-208ENST00000578985 SGPL1O95470 568 aa17.68■□□□□ 0.42
IFT20-208ENST00000578985 EDNRBP24530 442 aa17.68■□□□□ 0.42
IFT20-208ENST00000578985 GJA8P48165 433 aa17.68■□□□□ 0.42
IFT20-208ENST00000578985 ST3GAL1Q11201 340 aa17.68■□□□□ 0.42
IFT20-208ENST00000578985 UBE2SQ16763 222 aa17.68■□□□□ 0.42
IFT20-208ENST00000578985 EEPD1Q7L9B9 569 aa17.68■□□□□ 0.42
IFT20-208ENST00000578985 TEX2Q8IWB9 1127 aa17.68■□□□□ 0.42
IFT20-208ENST00000578985 CCDC83Q8IWF9 413 aa17.68■□□□□ 0.42
IFT20-208ENST00000578985 GLT8D2Q9H1C3 349 aa17.68■□□□□ 0.42
IFT20-208ENST00000578985 VTA1Q9NP79 307 aa17.68■□□□□ 0.42
IFT20-208ENST00000578985 ORC3Q9UBD5 711 aaPredicted RBP17.68■□□□□ 0.42
IFT20-208ENST00000578985 FAM184BQ9ULE4 1060 aa17.68■□□□□ 0.42
IFT20-208ENST00000578985 KIAA1217Q5T5P2 1943 aa17.68■□□□□ 0.42
IFT20-208ENST00000578985 ESYT2A0FGR8 921 aa17.67■□□□□ 0.42
IFT20-208ENST00000578985 MSCO60682 206 aa17.67■□□□□ 0.42
IFT20-208ENST00000578985 DTNBO60941 627 aa17.67■□□□□ 0.42
IFT20-208ENST00000578985 TFRCP02786 760 aaKnown RBP17.67■□□□□ 0.42
IFT20-208ENST00000578985 EN2P19622 333 aaPredicted RBP17.67■□□□□ 0.42
IFT20-208ENST00000578985 MCM2P49736 904 aa17.67■□□□□ 0.42
IFT20-208ENST00000578985 LHX8Q68G74 356 aa17.67■□□□□ 0.42
IFT20-208ENST00000578985 FBXO16Q8IX29 292 aaPredicted RBP17.67■□□□□ 0.42
IFT20-208ENST00000578985 NSUN7Q8NE18 718 aaKnown RBP17.67■□□□□ 0.42
IFT20-208ENST00000578985 CCDC148Q8NFR7 591 aa17.67■□□□□ 0.42
IFT20-208ENST00000578985 PDCD2LQ9BRP1 358 aa17.67■□□□□ 0.42
IFT20-208ENST00000578985 CRISPLD2Q9H0B8 497 aa17.67■□□□□ 0.42
IFT20-208ENST00000578985 SH3GLB2Q9NR46 395 aa17.67■□□□□ 0.42
IFT20-208ENST00000578985 VPS54Q9P1Q0 977 aa17.67■□□□□ 0.42
IFT20-208ENST00000578985 CD2BP2O95400 341 aaKnown RBP17.66■□□□□ 0.42
IFT20-208ENST00000578985 NR3C2P08235 984 aa17.66■□□□□ 0.42
IFT20-208ENST00000578985 MYCLP12524 364 aaPredicted RBP17.66■□□□□ 0.42
IFT20-208ENST00000578985 AKR1A1P14550 325 aa17.66■□□□□ 0.42
IFT20-208ENST00000578985 STXBP2Q15833 593 aa17.66■□□□□ 0.42
IFT20-208ENST00000578985 CCDC144BQ3MJ40 725 aa17.66■□□□□ 0.42
IFT20-208ENST00000578985 ANO1Q5XXA6 986 aa17.66■□□□□ 0.42
IFT20-208ENST00000578985 AIFM3Q96NN9 605 aa17.66■□□□□ 0.42
IFT20-208ENST00000578985 ZMYND12Q9H0C1 365 aa17.66■□□□□ 0.42
IFT20-208ENST00000578985 C6orf50Q9HD87 102 aa17.66■□□□□ 0.42
IFT20-208ENST00000578985 SPDYE3A6NKU9 549 aa17.65■□□□□ 0.42
IFT20-208ENST00000578985 CAPN2P17655 700 aa17.65■□□□□ 0.42
IFT20-208ENST00000578985 GNA11P29992 359 aa17.65■□□□□ 0.42
IFT20-208ENST00000578985 CCND2P30279 289 aa17.65■□□□□ 0.42
IFT20-208ENST00000578985 PGM5Q15124 567 aa17.65■□□□□ 0.42
IFT20-208ENST00000578985 TAPT1Q6NXT6 567 aa17.65■□□□□ 0.42
IFT20-208ENST00000578985 IL31RAQ8NI17 732 aa17.65■□□□□ 0.42
IFT20-208ENST00000578985 WASF1Q92558 559 aa17.65■□□□□ 0.42
IFT20-208ENST00000578985 SHISA4Q96DD7 197 aa17.65■□□□□ 0.42
IFT20-208ENST00000578985 LLPHQ9BRT6 129 aaKnown RBP17.65■□□□□ 0.42
IFT20-208ENST00000578985 PDGFCQ9NRA1 345 aa17.65■□□□□ 0.42
IFT20-208ENST00000578985 PCDHA6Q9UN73 950 aa17.65■□□□□ 0.42
IFT20-208ENST00000578985 PCDHA8Q9Y5H6 950 aa17.65■□□□□ 0.42
IFT20-208ENST00000578985 FRMPD4Q14CM0 1322 aa17.65■□□□□ 0.42
IFT20-208ENST00000578985 JAK2O60674 1132 aa17.64■□□□□ 0.41
IFT20-208ENST00000578985 EIF3JO75822 258 aaKnown RBP17.64■□□□□ 0.41
IFT20-208ENST00000578985 FOSP01100 380 aaPredicted RBP17.64■□□□□ 0.41
IFT20-208ENST00000578985 RARBP10826 455 aa17.64■□□□□ 0.41
IFT20-208ENST00000578985 FDPSP14324 419 aaKnown RBP17.64■□□□□ 0.41
IFT20-208ENST00000578985 NLRP5P59047 1200 aa17.64■□□□□ 0.41
IFT20-208ENST00000578985 IQSEC1Q6DN90 963 aa17.64■□□□□ 0.41
IFT20-208ENST00000578985 VSIG10LQ86VR7 867 aa17.64■□□□□ 0.41
IFT20-208ENST00000578985 FAM177A1Q8N128 213 aaPredicted RBP17.64■□□□□ 0.41
IFT20-208ENST00000578985 TMX3Q96JJ7 454 aa17.64■□□□□ 0.41
IFT20-208ENST00000578985 ALG1Q9BT22 464 aa17.64■□□□□ 0.41
IFT20-208ENST00000578985 EHMT1Q9H9B1 1298 aa17.64■□□□□ 0.41
IFT20-208ENST00000578985 OGDHLQ9ULD0 1010 aa17.64■□□□□ 0.41
IFT20-208ENST00000578985 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.63■□□□□ 0.41
IFT20-208ENST00000578985 RBM47A0AV96 593 aaKnown RBP17.63■□□□□ 0.41
IFT20-208ENST00000578985 XBP1P17861 261 aa17.63■□□□□ 0.41
IFT20-208ENST00000578985 ADCYAP1R1P41586 468 aa17.63■□□□□ 0.41
IFT20-208ENST00000578985 CLK2P49760 499 aaKnown RBP17.63■□□□□ 0.41
IFT20-208ENST00000578985 TNFAIP2Q03169 654 aa17.63■□□□□ 0.41
IFT20-208ENST00000578985 BICD2Q8TD16 824 aa17.63■□□□□ 0.41
IFT20-208ENST00000578985 LENG1Q96BZ8 264 aaPredicted RBP17.63■□□□□ 0.41
IFT20-208ENST00000578985 WDR11Q9BZH6 1224 aa17.63■□□□□ 0.41
IFT20-208ENST00000578985 TMEM260Q9NX78 707 aa17.63■□□□□ 0.41
IFT20-208ENST00000578985 HTTP42858 3142 aa17.63■□□□□ 0.41
IFT20-208ENST00000578985 ADAMTS3O15072 1205 aa17.62■□□□□ 0.41
IFT20-208ENST00000578985 DUSP11O75319 330 aaKnown RBP17.62■□□□□ 0.41
IFT20-208ENST00000578985 AP3B2Q13367 1082 aa17.62■□□□□ 0.41
IFT20-208ENST00000578985 JAKMIP3Q5VZ66 844 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms