RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 SMPD1P17405 629 aa16.7■□□□□ 0.26
MKS1-207ENST00000578789 METAP2P50579 478 aaKnown RBP eCLIP16.7■□□□□ 0.26
MKS1-207ENST00000578789 TNFAIP2Q03169 654 aa16.7■□□□□ 0.26
MKS1-207ENST00000578789 PDE4DQ08499 809 aa16.7■□□□□ 0.26
MKS1-207ENST00000578789 TOB2Q14106 344 aaPredicted RBP16.7■□□□□ 0.26
MKS1-207ENST00000578789 IQSEC1Q6DN90 963 aa16.7■□□□□ 0.26
MKS1-207ENST00000578789 CCSAPQ6IQ19 270 aaPredicted RBP16.7■□□□□ 0.26
MKS1-207ENST00000578789 DPF3Q92784 378 aa16.7■□□□□ 0.26
MKS1-207ENST00000578789 RMDN3Q96TC7 470 aa16.7■□□□□ 0.26
MKS1-207ENST00000578789 TSEN34Q9BSV6 310 aaKnown RBP16.7■□□□□ 0.26
MKS1-207ENST00000578789 PXMP2Q9NR77 195 aa16.7■□□□□ 0.26
MKS1-207ENST00000578789 PDGFCQ9NRA1 345 aa16.7■□□□□ 0.26
MKS1-207ENST00000578789 FRMPD4Q14CM0 1322 aa16.7■□□□□ 0.26
MKS1-207ENST00000578789 CCDC196A0A1B0GTZ2 297 aa16.69■□□□□ 0.26
MKS1-207ENST00000578789 CCDC82Q8N4S0 544 aa16.69■□□□□ 0.26
MKS1-207ENST00000578789 UPF3BQ9BZI7 483 aaKnown RBP16.69■□□□□ 0.26
MKS1-207ENST00000578789 Q9Y3F1 56 aa16.69■□□□□ 0.26
MKS1-207ENST00000578789 MYADML2A6NDP7 307 aa16.68■□□□□ 0.26
MKS1-207ENST00000578789 MOXD2PA6NHM9 499 aa16.68■□□□□ 0.26
MKS1-207ENST00000578789 PIK3CDO00329 1044 aa16.68■□□□□ 0.26
MKS1-207ENST00000578789 CTAGE5O15320 804 aa16.68■□□□□ 0.26
MKS1-207ENST00000578789 SEC24BO95487 1268 aa16.68■□□□□ 0.26
MKS1-207ENST00000578789 EIF2AK2P19525 551 aaKnown RBP16.68■□□□□ 0.26
MKS1-207ENST00000578789 HOXA13P31271 388 aaPredicted RBP16.68■□□□□ 0.26
MKS1-207ENST00000578789 SNX17Q15036 470 aa16.68■□□□□ 0.26
MKS1-207ENST00000578789 LRRC26Q2I0M4 334 aa16.68■□□□□ 0.26
MKS1-207ENST00000578789 C8orf34Q49A92 452 aa16.68■□□□□ 0.26
MKS1-207ENST00000578789 DUSP28Q4G0W2 176 aa16.68■□□□□ 0.26
MKS1-207ENST00000578789 ARHGEF16Q5VV41 709 aa16.68■□□□□ 0.26
MKS1-207ENST00000578789 TLK2Q86UE8 772 aa16.68■□□□□ 0.26
MKS1-207ENST00000578789 PDCD2LQ9BRP1 358 aa16.68■□□□□ 0.26
MKS1-207ENST00000578789 SENP6Q9GZR1 1112 aaPredicted RBP16.68■□□□□ 0.26
MKS1-207ENST00000578789 SPC25Q9HBM1 224 aa16.68■□□□□ 0.26
MKS1-207ENST00000578789 NAP1L2Q9ULW6 460 aaPredicted RBP16.68■□□□□ 0.26
MKS1-207ENST00000578789 hCG_1642624A0A1W2PR95 340 aa16.67■□□□□ 0.26
MKS1-207ENST00000578789 hCG_1984214I3L0E3 225 aa16.67■□□□□ 0.26
MKS1-207ENST00000578789 EVI5O60447 810 aa16.67■□□□□ 0.26
MKS1-207ENST00000578789 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
MKS1-207ENST00000578789 C6orf222P0C671 652 aaPredicted RBP16.67■□□□□ 0.26
MKS1-207ENST00000578789 ADD1P35611 737 aaKnown RBP16.67■□□□□ 0.26
MKS1-207ENST00000578789 C1QBPQ07021 282 aaKnown RBP16.67■□□□□ 0.26
MKS1-207ENST00000578789 STXBP2Q15833 593 aa16.67■□□□□ 0.26
MKS1-207ENST00000578789 PPP1R18Q6NYC8 613 aa16.67■□□□□ 0.26
MKS1-207ENST00000578789 ZNF713Q8N859 430 aaPredicted RBP16.67■□□□□ 0.26
MKS1-207ENST00000578789 SCFD2Q8WU76 684 aa16.67■□□□□ 0.26
MKS1-207ENST00000578789 WDR11Q9BZH6 1224 aa16.67■□□□□ 0.26
MKS1-207ENST00000578789 PDRG1Q9NUG6 133 aa16.67■□□□□ 0.26
MKS1-207ENST00000578789 A0A1W2PQ45 241 aaPredicted RBP16.66■□□□□ 0.26
MKS1-207ENST00000578789 A0A1W2PQY0 241 aa16.66■□□□□ 0.26
MKS1-207ENST00000578789 MEIS2O14770 477 aa16.66■□□□□ 0.26
MKS1-207ENST00000578789 NKRFO15226 690 aaKnown RBP eCLIP16.66■□□□□ 0.26
MKS1-207ENST00000578789 NR3C2P08235 984 aa16.66■□□□□ 0.26
MKS1-207ENST00000578789 PDIA3P30101 505 aaKnown RBP16.66■□□□□ 0.26
MKS1-207ENST00000578789 ACLYP53396 1101 aa16.66■□□□□ 0.26
MKS1-207ENST00000578789 IRX5P78411 483 aaPredicted RBP16.66■□□□□ 0.26
MKS1-207ENST00000578789 PGM5Q15124 567 aa16.66■□□□□ 0.26
MKS1-207ENST00000578789 TMEM63BQ5T3F8 832 aa16.66■□□□□ 0.26
MKS1-207ENST00000578789 C1orf53Q5VUE5 145 aa16.66■□□□□ 0.26
MKS1-207ENST00000578789 WWC2Q6AWC2 1192 aa16.66■□□□□ 0.26
MKS1-207ENST00000578789 TEX2Q8IWB9 1127 aa16.66■□□□□ 0.26
MKS1-207ENST00000578789 PCSK9Q8NBP7 692 aaKnown RBP16.66■□□□□ 0.26
MKS1-207ENST00000578789 GPKOWQ92917 476 aaPredicted RBP eCLIP16.66■□□□□ 0.26
MKS1-207ENST00000578789 ALDH8A1Q9H2A2 487 aaPredicted RBP16.66■□□□□ 0.26
MKS1-207ENST00000578789 NR2E3Q9Y5X4 410 aa16.66■□□□□ 0.26
MKS1-207ENST00000578789 H0YGN5 161 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 EIF3JO75822 258 aaKnown RBP16.65■□□□□ 0.26
MKS1-207ENST00000578789 PTGS1P23219 599 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 NTRK3Q16288 839 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 KCNA10Q16322 511 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 CCDC62Q6P9F0 684 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 SLC39A5Q6ZMH5 540 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 NOL8Q76FK4 1167 aaKnown RBP16.65■□□□□ 0.26
MKS1-207ENST00000578789 HEATR3Q7Z4Q2 680 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 VSIG10LQ86VR7 867 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 FCHSD1Q86WN1 690 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 C7orf61Q8IZ16 206 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 IL31RAQ8NI17 732 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 SMARCC2Q8TAQ2 1214 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 CUL5Q93034 780 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 ZNF274Q96GC6 653 aaPredicted RBP16.65■□□□□ 0.26
MKS1-207ENST00000578789 AP5M1Q9H0R1 490 aa16.65■□□□□ 0.26
MKS1-207ENST00000578789 RBM27Q9P2N5 1060 aaKnown RBP16.65■□□□□ 0.26
MKS1-207ENST00000578789 V9GY48 417 aaPredicted RBP16.65■□□□□ 0.26
MKS1-207ENST00000578789 STXBP3O00186 592 aa16.64■□□□□ 0.25
MKS1-207ENST00000578789 DYNC1LI2O43237 492 aaPredicted RBP16.64■□□□□ 0.25
MKS1-207ENST00000578789 ARIH2O95376 493 aa16.64■□□□□ 0.25
MKS1-207ENST00000578789 TTLL4Q14679 1199 aa16.64■□□□□ 0.25
MKS1-207ENST00000578789 FSCN1Q16658 493 aaKnown RBP16.64■□□□□ 0.25
MKS1-207ENST00000578789 PFKFB3Q16875 520 aaPredicted RBP16.64■□□□□ 0.25
MKS1-207ENST00000578789 GNASQ5JWF2 1037 aa16.64■□□□□ 0.25
MKS1-207ENST00000578789 TYW1BQ6NUM6 668 aa16.64■□□□□ 0.25
MKS1-207ENST00000578789 USP17L6PQ6QN14 398 aa16.64■□□□□ 0.25
MKS1-207ENST00000578789 FERMT2Q96AC1 680 aa16.64■□□□□ 0.25
MKS1-207ENST00000578789 PSTPIP2Q9H939 334 aa16.64■□□□□ 0.25
MKS1-207ENST00000578789 BARHL2Q9NY43 387 aa16.64■□□□□ 0.25
MKS1-207ENST00000578789 PRPF3O43395 683 aaKnown RBP16.63■□□□□ 0.25
MKS1-207ENST00000578789 RGS20O76081 388 aa16.63■□□□□ 0.25
MKS1-207ENST00000578789 ASGR1P07306 291 aa16.63■□□□□ 0.25
MKS1-207ENST00000578789 TXNP10599 105 aaKnown RBP16.63■□□□□ 0.25
MKS1-207ENST00000578789 IFNAR1P17181 557 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms