RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 RHOBTB3O94955 611 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 CYP3A4P08684 503 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 PLCG1P19174 1290 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 LMNB1P20700 586 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 SFPQP23246 707 aaKnown RBP eCLIP12.48□□□□□ -0.41
SKA2-204ENST00000578519 CIITAP33076 1130 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 SREBF1P36956 1147 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 ARHGAP4P98171 946 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 CUL4BQ13620 913 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 SUPT20HL1Q3ZLR7 823 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 USH1GQ495M9 461 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 TMC6Q7Z403 805 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 FILIP1Q7Z7B0 1213 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 LRRC8AQ8IWT6 810 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 PRPF38AQ8NAV1 312 aaKnown RBP12.48□□□□□ -0.41
SKA2-204ENST00000578519 SNX29Q8TEQ0 813 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 KIFC2Q96AC6 838 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 KIAA1683Q9H0B3 1180 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 PICK1Q9NRD5 415 aa12.48□□□□□ -0.41
SKA2-204ENST00000578519 MAGEC2Q9UBF1 373 aaPredicted RBP12.48□□□□□ -0.41
SKA2-204ENST00000578519 USP17L15C9J2P7 530 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 USP17L13C9JLJ4 530 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 USP17L11C9JVI0 530 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 USP17L18D6R9N7 530 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 USP17L22D6RA61 530 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 USP17L17D6RBQ6 530 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 USP17L19D6RCP7 530 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 USP17L20D6RJB6 530 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 MEIS2O14770 477 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 ZBED4O75132 1171 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 TDP2O95551 362 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 TUBB4AP04350 444 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 BMP6P22004 513 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 TERF1P54274 439 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 ASIC1P78348 528 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 USP17L24Q0WX57 530 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 RRP1BQ14684 758 aaKnown RBP12.47□□□□□ -0.41
SKA2-204ENST00000578519 COBLL1Q53SF7 1204 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 KLHL10Q6JEL2 608 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 USP17L6PQ6QN14 398 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 ARHGAP27Q6ZUM4 889 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 SPICE1Q8N0Z3 855 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 GPC2Q8N158 579 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 KIAA1524Q8TCG1 905 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 ACER1Q8TDN7 264 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 LARP4BQ92615 738 aaKnown RBP12.47□□□□□ -0.41
SKA2-204ENST00000578519 NUP88Q99567 741 aaPredicted RBP12.47□□□□□ -0.41
SKA2-204ENST00000578519 MAF1Q9H063 256 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 DEFB129Q9H1M3 183 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 BLZF1Q9H2G9 400 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.47□□□□□ -0.41
SKA2-204ENST00000578519 PGAP2Q9UHJ9 254 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 HACL1Q9UJ83 578 aa12.47□□□□□ -0.41
SKA2-204ENST00000578519 BAZ2BQ9UIF8 2168 aaKnown RBP12.47□□□□□ -0.41
SKA2-204ENST00000578519 SIPA1L1O43166 1804 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 PPP1R3GB7ZBB8 358 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 C19orf81C9J6K1 198 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 KIF2AO00139 706 aaPredicted RBP12.46□□□□□ -0.41
SKA2-204ENST00000578519 SLURP2P0DP57 97 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 ZNF18P17022 549 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 CDC25AP30304 524 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 CCT6AP40227 531 aaKnown RBP12.46□□□□□ -0.41
SKA2-204ENST00000578519 ECE1P42892 770 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 PDE4DQ08499 809 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 KMT5BQ4FZB7 885 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 TBC1D10BQ4KMP7 808 aaPredicted RBP12.46□□□□□ -0.41
SKA2-204ENST00000578519 HYIQ5T013 277 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 UNC13DQ70J99 1090 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 KRT26Q7Z3Y9 468 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 VSTM4Q8IW00 320 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 NELFBQ8WX92 580 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 RAD54LQ92698 747 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 UPF1Q92900 1129 aaKnown RBP eCLIP12.46□□□□□ -0.41
SKA2-204ENST00000578519 ZNF830Q96NB3 372 aaPredicted RBP12.46□□□□□ -0.41
SKA2-204ENST00000578519 SLF1Q9BQI6 1058 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 WDR18Q9BV38 432 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 SPTLC3Q9NUV7 552 aa12.46□□□□□ -0.41
SKA2-204ENST00000578519 FER1L6Q2WGJ9 1857 aa12.46□□□□□ -0.42
SKA2-204ENST00000578519 PP2D1A8MPX8 630 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 PHF20L1A8MW92 1017 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 SLC37A4O43826 429 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 ICAM1P05362 532 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 MUTP22033 750 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 PTGER2P43116 358 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 KCNJ6P48051 423 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 JAG1P78504 1218 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 SETQ01105 290 aaPredicted RBP12.45□□□□□ -0.42
SKA2-204ENST00000578519 RASSF7Q02833 373 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 TRIM14Q14142 442 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 TMEM119Q4V9L6 283 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 NAALADL2Q58DX5 795 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 CCDC174Q6PII3 467 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 PPFIBP1Q86W92 1011 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 CCDC65Q8IXS2 484 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 ADSSL1Q8N142 457 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 GIMAP8Q8ND71 665 aaPredicted RBP12.45□□□□□ -0.42
SKA2-204ENST00000578519 STAMQ92783 540 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 TSG101Q99816 390 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 TRIM9Q9C026 710 aa12.45□□□□□ -0.42
SKA2-204ENST00000578519 THAP9Q9H5L6 903 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms