RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 THG1LQ9NWX6 298 aaKnown RBP6.18□□□□□ -1.42
KRT39-202ENST00000578029 TMEFF2Q9UIK5 374 aaPredicted RBP6.18□□□□□ -1.42
KRT39-202ENST00000578029 NOB1Q9ULX3 412 aaKnown RBP6.18□□□□□ -1.42
KRT39-202ENST00000578029 COQ6Q9Y2Z9 468 aa6.18□□□□□ -1.42
KRT39-202ENST00000578029 CNTNAP4Q9C0A0 1308 aa6.18□□□□□ -1.42
KRT39-202ENST00000578029 TRBV23OR9-2A0A075B6M9 112 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.17□□□□□ -1.42
KRT39-202ENST00000578029 WDR64B1ANS9 1081 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 CKMP06732 381 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 BMP3P12645 472 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 PLS3P13797 630 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 BMP8BP34820 402 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 SNRPNP63162 240 aaKnown RBP6.17□□□□□ -1.42
KRT39-202ENST00000578029 NRG1Q02297 640 aaPredicted RBP6.17□□□□□ -1.42
KRT39-202ENST00000578029 NFKBIBQ15653 356 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 TMEM177Q53S58 311 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 RCSD1Q6JBY9 416 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 CXorf57Q6NSI4 855 aaKnown RBP6.17□□□□□ -1.42
KRT39-202ENST00000578029 PAOXQ6QHF9 649 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 C22orf34Q6ZV56 151 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 SCYL1Q96KG9 808 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 UBL7Q96S82 380 aaPredicted RBP6.17□□□□□ -1.42
KRT39-202ENST00000578029 RHOBTB2Q9BYZ6 727 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 SLC13A1Q9BZW2 595 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 EMC7Q9NPA0 242 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 CLEC1BQ9P126 229 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 IP6K2Q9UHH9 426 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 COMMD10Q9Y6G5 202 aa6.17□□□□□ -1.42
KRT39-202ENST00000578029 SHISA3A0PJX4 238 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 PTPDC1A2A3K4 754 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 C9orf172C9J069 976 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 ARNTLO00327 626 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 MSCO60682 206 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 LEFTY1O75610 366 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 SNUPNO95149 360 aaKnown RBP6.16□□□□□ -1.42
KRT39-202ENST00000578029 FAM87AP0C7U9 286 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 MYBL2P10244 700 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 IFNGR1P15260 489 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 VAV1P15498 845 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 PAMP19021 973 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 SESN3P58005 492 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 ST5P78524 1137 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 ARHGAP44Q17R89 818 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 ABCB5Q2M3G0 1257 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 ZNF385CQ66K41 422 aaPredicted RBP6.16□□□□□ -1.42
KRT39-202ENST00000578029 SLC4A10Q6U841 1118 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 HDGFL2Q7Z4V5 671 aaPredicted RBP6.16□□□□□ -1.42
KRT39-202ENST00000578029 CCDC103Q8IW40 242 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 SVOPQ8N4V2 548 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 CHTF18Q8WVB6 975 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 WFDC12Q8WWY7 111 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 FBXW5Q969U6 566 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 UTP4Q969X6 686 aaKnown RBP6.16□□□□□ -1.42
KRT39-202ENST00000578029 TCTN2Q96GX1 697 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 AHCYL2Q96HN2 611 aaKnown RBP6.16□□□□□ -1.42
KRT39-202ENST00000578029 FUBP3Q96I24 572 aaKnown RBP eCLIP6.16□□□□□ -1.42
KRT39-202ENST00000578029 MYRFLQ96LU7 910 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 NACC1Q96RE7 527 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 MMP19Q99542 508 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 SPTLC3Q9NUV7 552 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 GPATCH2Q9NW75 528 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 LUC7L2Q9Y383 392 aaKnown RBP6.16□□□□□ -1.42
KRT39-202ENST00000578029 WASHC2AQ641Q2 1341 aa6.16□□□□□ -1.42
KRT39-202ENST00000578029 FAM47E-STBD1D6RA91 191 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 IGF2BP3O00425 579 aaKnown RBP eCLIP6.15□□□□□ -1.42
KRT39-202ENST00000578029 WNT9AO14904 365 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 SOD2P04179 222 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 ZNF865P0CJ78 1059 aaPredicted RBP6.15□□□□□ -1.42
KRT39-202ENST00000578029 SPATA31C1P0DKV0 1188 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 LCP1P13796 627 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 ATP2A2P16615 1042 aaKnown RBP6.15□□□□□ -1.42
KRT39-202ENST00000578029 IREB2P48200 963 aaKnown RBP6.15□□□□□ -1.42
KRT39-202ENST00000578029 DNM2P50570 870 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 MECP2P51608 486 aaKnown RBP6.15□□□□□ -1.42
KRT39-202ENST00000578029 ERVK-21P61565 698 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 BRD3Q15059 726 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 C16orf59Q7L2K0 433 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 OVCH1Q7RTY7 1134 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 DGKHQ86XP1 1220 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 FAM20CQ8IXL6 584 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 CBARPQ8N350 705 aaPredicted RBP6.15□□□□□ -1.42
KRT39-202ENST00000578029 C2orf69Q8N8R5 385 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 SLC12A9Q9BXP2 914 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 GPR62Q9BZJ7 368 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 TCF7L1Q9HCS4 588 aa6.15□□□□□ -1.42
KRT39-202ENST00000578029 NPHP3-ACAD11A0A0J9YXS1 232 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 SSU72P8A0A1W2PR75 194 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 CCDC66A2RUB6 948 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 MYO1BO43795 1136 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 GSTM1P09488 218 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 NOS3P29474 1203 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 TNK2Q07912 1038 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 KLF1Q13351 362 aaPredicted RBP6.14□□□□□ -1.43
KRT39-202ENST00000578029 INAVAQ3KP66 663 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 KSR2Q6VAB6 950 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 FAM214BQ7L5A3 538 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 MFSD4AQ8N468 514 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 SAMD3Q8N6K7 520 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 RCBTB1Q8NDN9 531 aa6.14□□□□□ -1.43
KRT39-202ENST00000578029 SLC5A5Q92911 643 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms