RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 NUP88Q99567 741 aaPredicted RBP8.24□□□□□ -1.09
CASC3-205ENST00000577605 ESYT1Q9BSJ8 1104 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 ACAD9Q9H845 621 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 PRR12Q9ULL5 1215 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 ISY1Q9ULR0 285 aaKnown RBP8.24□□□□□ -1.09
CASC3-205ENST00000577605 FCF1Q9Y324 198 aaKnown RBP8.24□□□□□ -1.09
CASC3-205ENST00000577605 TACC3Q9Y6A5 838 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 SYNGAP1Q96PV0 1343 aa8.24□□□□□ -1.09
CASC3-205ENST00000577605 DNAJC25-GNG10A0A024R161 153 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 B4DLN1 442 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 B4E1Z4 1266 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 SEPT4O43236 478 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 NMT2O60551 498 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 PEX10O60683 326 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 COBLO75128 1261 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 CDC45O75419 566 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 FARP2O94887 1054 aaPredicted RBP8.23□□□□□ -1.09
CASC3-205ENST00000577605 ICAM1P05362 532 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 CYP21A2P08686 494 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 MRPL12P52815 198 aaKnown RBP8.23□□□□□ -1.09
CASC3-205ENST00000577605 ZNF543Q08ER8 600 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 IFIT1BQ5T764 474 aaKnown RBP8.23□□□□□ -1.09
CASC3-205ENST00000577605 SYDE2Q5VT97 1194 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 PRPF38BQ5VTL8 546 aaKnown RBP8.23□□□□□ -1.09
CASC3-205ENST00000577605 MAMDC4Q6UXC1 1216 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 LIAT1Q6ZQX7 453 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 NECAB2Q7Z6G3 386 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 UBE2Q1Q7Z7E8 422 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 CPXCR1Q8N123 301 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 SAMD3Q8N6K7 520 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 ARRDC4Q8NCT1 418 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 PNMA1Q8ND90 353 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 NPLOC4Q8TAT6 608 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 ADAMTS19Q8TE59 1207 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 MPHOSPH6Q99547 160 aaKnown RBP8.23□□□□□ -1.09
CASC3-205ENST00000577605 MAP3K14Q99558 947 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 PPP1R12CQ9BZL4 782 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 RANBP17Q9H2T7 1088 aaKnown RBP8.23□□□□□ -1.09
CASC3-205ENST00000577605 RAVER2Q9HCJ3 691 aaKnown RBP8.23□□□□□ -1.09
CASC3-205ENST00000577605 PPP4R2Q9NY27 417 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 DDX20Q9UHI6 824 aaKnown RBP8.23□□□□□ -1.09
CASC3-205ENST00000577605 CNPY2Q9Y2B0 182 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 NR2E3Q9Y5X4 410 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 TNKSO95271 1327 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 NEDD4P46934 1319 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 WDR19Q8NEZ3 1342 aa8.23□□□□□ -1.09
CASC3-205ENST00000577605 GREB1LQ9C091 1923 aaPredicted RBP8.23□□□□□ -1.09
CASC3-205ENST00000577605 ASB14A6NK59 587 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 E7EWF7 191 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 GFRA3O60609 400 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 MYCP01106 439 aaPredicted RBP8.22□□□□□ -1.09
CASC3-205ENST00000577605 PARP1P09874 1014 aaKnown RBP8.22□□□□□ -1.09
CASC3-205ENST00000577605 CYBAP13498 195 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 PTH1RQ03431 593 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 KRT32Q14532 448 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 CCL14Q16627 93 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 KCTD1Q719H9 257 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 ENAHQ8N8S7 591 aaPredicted RBP8.22□□□□□ -1.09
CASC3-205ENST00000577605 SPIRE2Q8WWL2 714 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 SHISA4Q96DD7 197 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 TMEM87BQ96K49 555 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 TRERF1Q96PN7 1200 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 USB1Q9BQ65 265 aaKnown RBP8.22□□□□□ -1.09
CASC3-205ENST00000577605 TINF2Q9BSI4 451 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 MAP3K20Q9NYL2 800 aaKnown RBP8.22□□□□□ -1.09
CASC3-205ENST00000577605 ADD3Q9UEY8 706 aaKnown RBP8.22□□□□□ -1.09
CASC3-205ENST00000577605 CCPG1Q9ULG6 757 aa8.22□□□□□ -1.09
CASC3-205ENST00000577605 GNEQ9Y223 722 aaKnown RBP8.22□□□□□ -1.09
CASC3-205ENST00000577605 RBM8AQ9Y5S9 174 aaKnown RBP8.22□□□□□ -1.09
CASC3-205ENST00000577605 BAZ2AQ9UIF9 1905 aaKnown RBP8.21□□□□□ -1.09
CASC3-205ENST00000577605 IFIT3O14879 490 aaKnown RBP8.21□□□□□ -1.1
CASC3-205ENST00000577605 CALM1P0DP23 149 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 CALM2P0DP24 149 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 CALM3P0DP25 149 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 AKR1A1P14550 325 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 SMARCA1P28370 1054 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 CNGA1P29973 690 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 MCM5P33992 734 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 WTAPQ15007 396 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 NECTIN1Q15223 517 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 SEC23AQ15436 765 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 TSGA10IPQ3SY00 556 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 CATIPQ7Z7H3 387 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 MCF2L2Q86YR7 1114 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 SYMPKQ92797 1274 aaKnown RBP8.21□□□□□ -1.1
CASC3-205ENST00000577605 LZTS2Q9BRK4 669 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 LSG1Q9H089 658 aaKnown RBP8.21□□□□□ -1.1
CASC3-205ENST00000577605 ABHD16BQ9H3Z7 469 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 C11orf49Q9H6J7 331 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 ANO2Q9NQ90 1003 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 RNF146Q9NTX7 359 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 FLRT1Q9NZU1 646 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 FAM184BQ9ULE4 1060 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 RIPK3Q9Y572 518 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 ZNF236Q9UL36 1845 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 ZNF536O15090 1300 aa8.21□□□□□ -1.1
CASC3-205ENST00000577605 A0A0G2JMZ2 1700 aa8.2□□□□□ -1.1
CASC3-205ENST00000577605 DNM1LO00429 736 aa8.2□□□□□ -1.1
CASC3-205ENST00000577605 REC8O95072 547 aa8.2□□□□□ -1.1
CASC3-205ENST00000577605 RARBP10826 455 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms