RNA–Protein interactions for RNA: ENST00000577565.1

SNRPN-208, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNRPN, Length 1,298 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-208ENST00000577565 RAD9AQ99638 391 aa13.84□□□□□ -0.19
SNRPN-208ENST00000577565 C17orf80Q9BSJ5 609 aa13.84□□□□□ -0.19
SNRPN-208ENST00000577565 ZBED2Q9BTP6 218 aa13.84□□□□□ -0.19
SNRPN-208ENST00000577565 KCNH6Q9H252 994 aa13.84□□□□□ -0.19
SNRPN-208ENST00000577565 GPHNQ9NQX3 736 aaPredicted RBP13.84□□□□□ -0.19
SNRPN-208ENST00000577565 CCPG1Q9ULG6 757 aa13.84□□□□□ -0.19
SNRPN-208ENST00000577565 M0R2C6 588 aa13.83□□□□□ -0.2
SNRPN-208ENST00000577565 GPAA1O43292 621 aa13.83□□□□□ -0.2
SNRPN-208ENST00000577565 ICAM1P05362 532 aa13.83□□□□□ -0.2
SNRPN-208ENST00000577565 RBL2Q08999 1139 aa13.83□□□□□ -0.2
SNRPN-208ENST00000577565 MKRN4PQ13434 485 aaPredicted RBP13.83□□□□□ -0.2
SNRPN-208ENST00000577565 CSPP1Q1MSJ5 1256 aa13.83□□□□□ -0.2
SNRPN-208ENST00000577565 FAM117BQ6P1L5 589 aa13.83□□□□□ -0.2
SNRPN-208ENST00000577565 CNKSR3Q6P9H4 555 aa13.83□□□□□ -0.2
SNRPN-208ENST00000577565 TRAF7Q6Q0C0 670 aa13.83□□□□□ -0.2
SNRPN-208ENST00000577565 LRRC8DQ7L1W4 858 aa13.83□□□□□ -0.2
SNRPN-208ENST00000577565 C19orf67A6NJJ6 358 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 NMT2O60551 498 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 TSPY3P0CV98 308 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 TSPY8P0CW00 308 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 SELPP16109 830 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 EDNRBP24530 442 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 TDO2P48775 406 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 TFAP4Q01664 338 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 MBTPS1Q14703 1052 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 COL19A1Q14993 1142 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 PPP2R5BQ15173 497 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 TTBK2Q6IQ55 1244 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 RCSD1Q6JBY9 416 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 ZSCAN25Q6NSZ9 544 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 CAGE1Q8TC20 777 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 CLEC4DQ8WXI8 215 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 APPBP2Q92624 585 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 KAT2BQ92831 832 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 WNT8BQ93098 351 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 RANBP17Q9H2T7 1088 aaKnown RBP13.82□□□□□ -0.2
SNRPN-208ENST00000577565 IL17RBQ9NRM6 502 aa13.82□□□□□ -0.2
SNRPN-208ENST00000577565 ADD3Q9UEY8 706 aaKnown RBP13.82□□□□□ -0.2
SNRPN-208ENST00000577565 TECTAO75443 2155 aa13.81□□□□□ -0.2
SNRPN-208ENST00000577565 LOC102724159A0A0B4J2E5 919 aa13.81□□□□□ -0.2
SNRPN-208ENST00000577565 RAB11FIP3O75154 756 aa13.81□□□□□ -0.2
SNRPN-208ENST00000577565 CKBP12277 381 aa13.81□□□□□ -0.2
SNRPN-208ENST00000577565 SLC16A2P36021 539 aa13.81□□□□□ -0.2
SNRPN-208ENST00000577565 CHMP4BP1P59074 171 aa13.81□□□□□ -0.2
SNRPN-208ENST00000577565 PWP2Q15269 919 aaKnown RBP13.81□□□□□ -0.2
SNRPN-208ENST00000577565 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.81□□□□□ -0.25e-7■■□□□ 13
SNRPN-208ENST00000577565 SESTD1Q86VW0 696 aa13.81□□□□□ -0.2
SNRPN-208ENST00000577565 KBTBD3Q8NAB2 608 aa13.81□□□□□ -0.2
SNRPN-208ENST00000577565 FBXO22Q8NEZ5 403 aa13.81□□□□□ -0.2
SNRPN-208ENST00000577565 MRPL38Q96DV4 380 aaKnown RBP13.81□□□□□ -0.2
SNRPN-208ENST00000577565 NOD1Q9Y239 953 aa13.81□□□□□ -0.2
SNRPN-208ENST00000577565 ATG2AQ2TAZ0 1938 aa13.8□□□□□ -0.2
SNRPN-208ENST00000577565 ABHD14A-ACY1A0A1B0GW23 586 aa13.8□□□□□ -0.2
SNRPN-208ENST00000577565 PTPDC1A2A3K4 754 aa13.8□□□□□ -0.2
SNRPN-208ENST00000577565 NKRFO15226 690 aaKnown RBP eCLIP13.8□□□□□ -0.2
SNRPN-208ENST00000577565 KPNA6O60684 536 aa13.8□□□□□ -0.2
SNRPN-208ENST00000577565 IRS1P35568 1242 aa13.8□□□□□ -0.2
SNRPN-208ENST00000577565 TRIM71Q2Q1W2 868 aaKnown RBP13.8□□□□□ -0.2
SNRPN-208ENST00000577565 CCDC62Q6P9F0 684 aa13.8□□□□□ -0.2
SNRPN-208ENST00000577565 IFNL3Q8IZI9 196 aa13.8□□□□□ -0.2
SNRPN-208ENST00000577565 PRSS33Q8NF86 280 aa13.8□□□□□ -0.2
SNRPN-208ENST00000577565 SP7Q8TDD2 431 aaPredicted RBP13.8□□□□□ -0.2
SNRPN-208ENST00000577565 SCFD2Q8WU76 684 aa13.8□□□□□ -0.2
SNRPN-208ENST00000577565 ZNF287Q9HBT7 754 aa13.8□□□□□ -0.2
SNRPN-208ENST00000577565 INCENPQ9NQS7 918 aa13.8□□□□□ -0.2
SNRPN-208ENST00000577565 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.8□□□□□ -0.2
SNRPN-208ENST00000577565 FOXP2O15409 715 aa13.79□□□□□ -0.2
SNRPN-208ENST00000577565 SMARCA5O60264 1052 aaPredicted RBP13.79□□□□□ -0.2
SNRPN-208ENST00000577565 MMP3P08254 477 aa13.79□□□□□ -0.2
SNRPN-208ENST00000577565 TXNP10599 105 aaKnown RBP13.79□□□□□ -0.2
SNRPN-208ENST00000577565 CALML3P27482 149 aa13.79□□□□□ -0.2
SNRPN-208ENST00000577565 NOVP48745 357 aa13.79□□□□□ -0.2
SNRPN-208ENST00000577565 HTRA4P83105 476 aaPredicted RBP13.79□□□□□ -0.2
SNRPN-208ENST00000577565 PUS10Q3MIT2 529 aaKnown RBP13.79□□□□□ -0.2
SNRPN-208ENST00000577565 TCEAL5Q5H9L2 206 aa13.79□□□□□ -0.2
SNRPN-208ENST00000577565 CCDC155Q8N6L0 562 aa13.79□□□□□ -0.2
SNRPN-208ENST00000577565 AFG1LQ8WV93 481 aa13.79□□□□□ -0.2
SNRPN-208ENST00000577565 PABPC5Q96DU9 382 aaKnown RBP13.79□□□□□ -0.2
SNRPN-208ENST00000577565 SEC62Q99442 399 aaKnown RBP13.79□□□□□ -0.2
SNRPN-208ENST00000577565 MTMR7Q9Y216 660 aa13.79□□□□□ -0.2
SNRPN-208ENST00000577565 RAD50Q92878 1312 aa13.79□□□□□ -0.2
SNRPN-208ENST00000577565 MYO7AQ13402 2215 aa13.79□□□□□ -0.2
SNRPN-208ENST00000577565 RNF113AO15541 343 aaKnown RBP13.78□□□□□ -0.2
SNRPN-208ENST00000577565 LTBRP36941 435 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 RPS6P62753 249 aaKnown RBP13.78□□□□□ -0.2
SNRPN-208ENST00000577565 PPARAQ07869 468 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 ARHGAP1Q07960 439 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 PDE4DQ08499 809 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 HIC1Q14526 733 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 EPC2Q52LR7 807 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 BRDTQ58F21 947 aaPredicted RBP13.78□□□□□ -0.2
SNRPN-208ENST00000577565 ZNF618Q5T7W0 954 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 TSHZ3Q63HK5 1081 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 BTNL9Q6UXG8 535 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 ADHFE1Q8IWW8 467 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 ZBTB40Q9NUA8 1239 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 PRKAG3Q9UGI9 489 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 GTF2IRD1Q9UHL9 959 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 MUTYHQ9UIF7 546 aa13.78□□□□□ -0.2
SNRPN-208ENST00000577565 STX8Q9UNK0 236 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms