RNA–Protein interactions for RNA: ENST00000577530.1

CCDC57-210, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-210ENST00000577530 PRC1O43663 620 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 CDC45O75419 566 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 SMAD3P84022 425 aaKnown RBP12.16□□□□□ -0.46
CCDC57-210ENST00000577530 PPIGQ13427 754 aaKnown RBP eCLIP12.16□□□□□ -0.462e-7■■□□□ 13.7
CCDC57-210ENST00000577530 ITGA7Q13683 1181 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 GRM4Q14833 912 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 SART3Q15020 963 aaKnown RBP12.16□□□□□ -0.46
CCDC57-210ENST00000577530 PPP2R5BQ15173 497 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 ZNF697Q5TEC3 545 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 MFSD5Q6N075 450 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 Q7L0L9 218 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 FBXO11Q86XK2 927 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 HOMER1Q86YM7 354 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 RAB11FIP4Q86YS3 637 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 SLC43A3Q8NBI5 491 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 IGDCC4Q8TDY8 1250 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 SCFD2Q8WU76 684 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 STXBP5LQ9Y2K9 1186 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 SZT2Q5T011 3432 aa12.16□□□□□ -0.46
CCDC57-210ENST00000577530 LAMA3Q16787 3333 aa12.15□□□□□ -0.46
CCDC57-210ENST00000577530 PALM3A6NDB9 673 aaPredicted RBP12.15□□□□□ -0.46
CCDC57-210ENST00000577530 PPP1R11O60927 126 aaPredicted RBP12.15□□□□□ -0.46
CCDC57-210ENST00000577530 CD4P01730 458 aa12.15□□□□□ -0.46
CCDC57-210ENST00000577530 TRAF1Q13077 416 aa12.15□□□□□ -0.46
CCDC57-210ENST00000577530 NECTIN1Q15223 517 aa12.15□□□□□ -0.46
CCDC57-210ENST00000577530 CASC1Q6TDU7 716 aa12.15□□□□□ -0.46
CCDC57-210ENST00000577530 TMEM199Q8N511 208 aa12.15□□□□□ -0.46
CCDC57-210ENST00000577530 OR6J1Q8NGC5 347 aa12.15□□□□□ -0.46
CCDC57-210ENST00000577530 NSUN6Q8TEA1 469 aaKnown RBP12.15□□□□□ -0.46
CCDC57-210ENST00000577530 PIGSQ96S52 555 aa12.15□□□□□ -0.46
CCDC57-210ENST00000577530 AMNQ9BXJ7 453 aa12.15□□□□□ -0.46
CCDC57-210ENST00000577530 LY9Q9HBG7 655 aa12.15□□□□□ -0.46
CCDC57-210ENST00000577530 KPNA6O60684 536 aa12.14□□□□□ -0.47
CCDC57-210ENST00000577530 RXRAP19793 462 aa12.14□□□□□ -0.47
CCDC57-210ENST00000577530 EPHB4P54760 987 aa12.14□□□□□ -0.47
CCDC57-210ENST00000577530 TROAPQ12815 778 aa12.14□□□□□ -0.47
CCDC57-210ENST00000577530 TTLL4Q14679 1199 aa12.14□□□□□ -0.47
CCDC57-210ENST00000577530 PSRC1Q6PGN9 363 aaPredicted RBP12.14□□□□□ -0.47
CCDC57-210ENST00000577530 NFXL1Q6ZNB6 911 aa12.14□□□□□ -0.47
CCDC57-210ENST00000577530 CATIPQ7Z7H3 387 aa12.14□□□□□ -0.47
CCDC57-210ENST00000577530 RASEFQ8IZ41 740 aa12.14□□□□□ -0.47
CCDC57-210ENST00000577530 SYTL5Q8TDW5 730 aaPredicted RBP12.14□□□□□ -0.47
CCDC57-210ENST00000577530 TCEANC2Q96MN5 208 aa12.14□□□□□ -0.47
CCDC57-210ENST00000577530 TAAR1Q96RJ0 339 aa12.14□□□□□ -0.47
CCDC57-210ENST00000577530 IWS1Q96ST2 819 aa12.14□□□□□ -0.47
CCDC57-210ENST00000577530 PPP1R12CQ9BZL4 782 aa12.14□□□□□ -0.47
CCDC57-210ENST00000577530 MAP3K20Q9NYL2 800 aaKnown RBP12.14□□□□□ -0.47
CCDC57-210ENST00000577530 COL20A1Q9P218 1284 aa12.14□□□□□ -0.47
CCDC57-210ENST00000577530 TMEM265A0A087WTH1 108 aa12.13□□□□□ -0.47
CCDC57-210ENST00000577530 SH2B2O14492 632 aaPredicted RBP12.13□□□□□ -0.47
CCDC57-210ENST00000577530 ZBTB5O15062 677 aa12.13□□□□□ -0.47
CCDC57-210ENST00000577530 CYTH3O43739 400 aa12.13□□□□□ -0.47
CCDC57-210ENST00000577530 TXNP10599 105 aaKnown RBP12.13□□□□□ -0.47
CCDC57-210ENST00000577530 MCM5P33992 734 aa12.13□□□□□ -0.47
CCDC57-210ENST00000577530 PURAQ00577 322 aaKnown RBP12.13□□□□□ -0.47
CCDC57-210ENST00000577530 ZNF654Q8IZM8 581 aa12.13□□□□□ -0.47
CCDC57-210ENST00000577530 CMTR1Q8N1G2 835 aaKnown RBP12.13□□□□□ -0.47
CCDC57-210ENST00000577530 SAMD3Q8N6K7 520 aa12.13□□□□□ -0.47
CCDC57-210ENST00000577530 RMDN3Q96TC7 470 aa12.13□□□□□ -0.47
CCDC57-210ENST00000577530 MTG1Q9BT17 334 aaPredicted RBP12.13□□□□□ -0.47
CCDC57-210ENST00000577530 HIPK3Q9H422 1215 aa12.13□□□□□ -0.47
CCDC57-210ENST00000577530 GRIN2DO15399 1336 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 KIAA1217Q5T5P2 1943 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.12□□□□□ -0.47
CCDC57-210ENST00000577530 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.12□□□□□ -0.47
CCDC57-210ENST00000577530 A6NJR5 290 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 OPLAHO14841 1288 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 CFBP00751 764 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 MYL3P08590 195 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 SUPT20HL2P0C7V6 817 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 CSF2RAP15509 400 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 PSMC6P62333 389 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 GHRHRQ02643 423 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 STXBP2Q15833 593 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 ADCK5Q3MIX3 580 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 ARHGEF16Q5VV41 709 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 COPS5Q92905 334 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 MTMR8Q96EF0 704 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 MTA3Q9BTC8 594 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 MTIF3Q9H2K0 278 aaKnown RBP12.12□□□□□ -0.47
CCDC57-210ENST00000577530 RIOX1Q9H6W3 641 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 PCDHA1Q9Y5I3 950 aa12.12□□□□□ -0.47
CCDC57-210ENST00000577530 SCN10AQ9Y5Y9 1956 aa12.11□□□□□ -0.47
CCDC57-210ENST00000577530 CCDC69A6NI79 296 aa12.11□□□□□ -0.47
CCDC57-210ENST00000577530 B4GALT4O60513 344 aa12.11□□□□□ -0.47
CCDC57-210ENST00000577530 PLEKHA8P1O95397 391 aa12.11□□□□□ -0.47
CCDC57-210ENST00000577530 CPA1P15085 419 aa12.11□□□□□ -0.47
CCDC57-210ENST00000577530 EIF2AK2P19525 551 aaKnown RBP12.11□□□□□ -0.47
CCDC57-210ENST00000577530 HOXA13P31271 388 aaPredicted RBP12.11□□□□□ -0.47
CCDC57-210ENST00000577530 CYP2C18P33260 490 aa12.11□□□□□ -0.47
CCDC57-210ENST00000577530 HSD17B4P51659 736 aa12.11□□□□□ -0.47
CCDC57-210ENST00000577530 PTPN11Q06124 597 aaPredicted RBP12.11□□□□□ -0.47
CCDC57-210ENST00000577530 SLC17A8Q8NDX2 589 aa12.11□□□□□ -0.47
CCDC57-210ENST00000577530 FAM161BQ96MY7 647 aa12.11□□□□□ -0.47
CCDC57-210ENST00000577530 NEK1Q96PY6 1258 aa12.11□□□□□ -0.47
CCDC57-210ENST00000577530 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.11□□□□□ -0.471e-6■■■□□ 17.6
CCDC57-210ENST00000577530 ALDH8A1Q9H2A2 487 aaPredicted RBP12.11□□□□□ -0.47
CCDC57-210ENST00000577530 IL23AQ9NPF7 189 aa12.11□□□□□ -0.47
CCDC57-210ENST00000577530 hCG_1642624A0A1W2PR95 340 aa12.1□□□□□ -0.47
CCDC57-210ENST00000577530 EIF3JO75822 258 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms