RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 USP25Q9UHP3 1055 aa14.14□□□□□ -0.15
TSEN54-204ENST00000577197 HPSEQ9Y251 543 aa14.14□□□□□ -0.15
TSEN54-204ENST00000577197 COL11A1P12107 1806 aaPredicted RBP14.13□□□□□ -0.15
TSEN54-204ENST00000577197 NEMFO60524 1076 aa14.13□□□□□ -0.15
TSEN54-204ENST00000577197 GCLCP48506 637 aaPredicted RBP14.13□□□□□ -0.15
TSEN54-204ENST00000577197 HERVK_113P62684 666 aa14.13□□□□□ -0.15
TSEN54-204ENST00000577197 TAF1CQ15572 869 aaPredicted RBP14.13□□□□□ -0.15
TSEN54-204ENST00000577197 CCDC174Q6PII3 467 aa14.13□□□□□ -0.15
TSEN54-204ENST00000577197 RIOX2Q8IUF8 465 aa14.13□□□□□ -0.15
TSEN54-204ENST00000577197 CCAR1Q8IX12 1150 aaKnown RBP14.13□□□□□ -0.15
TSEN54-204ENST00000577197 CLEC4DQ8WXI8 215 aa14.13□□□□□ -0.15
TSEN54-204ENST00000577197 P2RX7Q99572 595 aaKnown RBP14.13□□□□□ -0.15
TSEN54-204ENST00000577197 ZFYVE28Q9HCC9 887 aa14.13□□□□□ -0.15
TSEN54-204ENST00000577197 RPTORQ8N122 1335 aa14.13□□□□□ -0.15
TSEN54-204ENST00000577197 LOC102724159A0A0B4J2E5 919 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 ADAMTS3O15072 1205 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 CA12O43570 354 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 SLC25A27O95847 323 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 OR52Z1P0C646 297 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 MCM7P33993 719 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 ZNF445P59923 1031 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 ARHGAP4P98171 946 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 PWP2Q15269 919 aaKnown RBP14.12□□□□□ -0.15
TSEN54-204ENST00000577197 UBE2SQ16763 222 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 Q4G0T1 1027 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 NOM1Q5C9Z4 860 aaKnown RBP14.12□□□□□ -0.15
TSEN54-204ENST00000577197 USP17L6PQ6QN14 398 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 RBM43Q6ZSC3 357 aaKnown RBP14.12□□□□□ -0.15
TSEN54-204ENST00000577197 NIPA1Q7RTP0 329 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 KCTD17Q8N5Z5 321 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 DNAJC5GQ8N7S2 189 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 SMCR8Q8TEV9 937 aaPredicted RBP14.12□□□□□ -0.15
TSEN54-204ENST00000577197 CCDC34Q96HJ3 373 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 AGBL1Q96MI9 1066 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 MTMR9Q96QG7 549 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 CFHR5Q9BXR6 569 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 RAB34Q9BZG1 259 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 FAM13BQ9NYF5 915 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 STK24Q9Y6E0 443 aa14.12□□□□□ -0.15
TSEN54-204ENST00000577197 SMCHD1A6NHR9 2005 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 CCNT1O60563 726 aaKnown RBP14.11□□□□□ -0.15
TSEN54-204ENST00000577197 KINO60870 393 aaKnown RBP14.11□□□□□ -0.15
TSEN54-204ENST00000577197 CYP2C8P10632 490 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 MARCKSP29966 332 aaPredicted RBP14.11□□□□□ -0.15
TSEN54-204ENST00000577197 STAT3P40763 770 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 FXR2P51116 673 aaKnown RBP eCLIP14.11□□□□□ -0.15
TSEN54-204ENST00000577197 SETQ01105 290 aaPredicted RBP14.11□□□□□ -0.15
TSEN54-204ENST00000577197 MAP2K1Q02750 393 aaPredicted RBP14.11□□□□□ -0.15
TSEN54-204ENST00000577197 SNW1Q13573 536 aaKnown RBP14.11□□□□□ -0.15
TSEN54-204ENST00000577197 PDIA5Q14554 519 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 TMEM132BQ14DG7 1078 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 ZNF174Q15697 407 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 LETM2Q2VYF4 491 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 CAVIN1Q6NZI2 390 aaKnown RBP14.11□□□□□ -0.15
TSEN54-204ENST00000577197 DTHD1Q6ZMT9 781 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 SLFN12Q8IYM2 578 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 FMR1NBQ8N0W7 255 aaPredicted RBP14.11□□□□□ -0.15
TSEN54-204ENST00000577197 FSIP1Q8NA03 581 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 SHCBP1Q8NEM2 672 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 FAM20AQ96MK3 541 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 ACAD9Q9H845 621 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 RAVER2Q9HCJ3 691 aaKnown RBP14.11□□□□□ -0.15
TSEN54-204ENST00000577197 TMEM260Q9NX78 707 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 PFASO15067 1338 aa14.11□□□□□ -0.15
TSEN54-204ENST00000577197 EDIL3O43854 480 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 TLR2O60603 784 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 STAM2O75886 525 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 CFBP00751 764 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 BCRP11274 1271 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 SNAP25P60880 206 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 SNRNP48Q6IEG0 339 aaKnown RBP14.1□□□□□ -0.15
TSEN54-204ENST00000577197 KANK3Q6NY19 840 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 SHC4Q6S5L8 630 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 TRERF1Q96PN7 1200 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 NUP62CLQ9H1M0 184 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 CLSTN2Q9H4D0 955 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 KCNMB3Q9NPA1 279 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 RNF146Q9NTX7 359 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 SAGE1Q9NXZ1 904 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 DACT1Q9NYF0 836 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 TMEM63CQ9P1W3 806 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 MORF4L1Q9UBU8 362 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 ADGRA2Q96PE1 1338 aa14.1□□□□□ -0.15
TSEN54-204ENST00000577197 WNT7AO00755 349 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 ALAS1P13196 640 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 PFKFB1P16118 471 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 LIG1P18858 919 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 TXLNAP40222 546 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 CALCRLQ16602 461 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 TMEM266Q2M3C6 531 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 ZSCAN23Q3MJ62 389 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 SAMD1Q6SPF0 538 aaPredicted RBP14.09□□□□□ -0.15
TSEN54-204ENST00000577197 RNF207Q6ZRF8 634 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 CPXCR1Q8N123 301 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 IGSF22Q8N9C0 903 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 DNERQ8NFT8 737 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 CCSER1Q9C0I3 900 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 SPATC1LQ9H0A9 340 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 RNF186Q9NXI6 227 aa14.09□□□□□ -0.15
TSEN54-204ENST00000577197 RBPJLQ9UBG7 517 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms