RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SELPP16109 830 aa19.29■□□□□ 0.68
CTDNEP1-211ENST00000575783 CALML3P27482 149 aa19.29■□□□□ 0.68
CTDNEP1-211ENST00000575783 PDE4BQ07343 736 aa19.29■□□□□ 0.68
CTDNEP1-211ENST00000575783 PDE4DQ08499 809 aa19.29■□□□□ 0.68
CTDNEP1-211ENST00000575783 CNKSR3Q6P9H4 555 aa19.29■□□□□ 0.68
CTDNEP1-211ENST00000575783 RASGRP2Q7LDG7 609 aa19.29■□□□□ 0.68
CTDNEP1-211ENST00000575783 CAGE1Q8TC20 777 aa19.29■□□□□ 0.68
CTDNEP1-211ENST00000575783 BRWD1Q9NSI6 2320 aa19.28■□□□□ 0.68
CTDNEP1-211ENST00000575783 NFIBO00712 420 aa19.28■□□□□ 0.68
CTDNEP1-211ENST00000575783 NKRFO15226 690 aaKnown RBP eCLIP19.28■□□□□ 0.68
CTDNEP1-211ENST00000575783 GNAT2P19087 354 aa19.28■□□□□ 0.68
CTDNEP1-211ENST00000575783 EP400NLQ6ZTU2 488 aa19.28■□□□□ 0.68
CTDNEP1-211ENST00000575783 LRRC8DQ7L1W4 858 aa19.28■□□□□ 0.68
CTDNEP1-211ENST00000575783 APPBP2Q92624 585 aa19.28■□□□□ 0.68
CTDNEP1-211ENST00000575783 PATL2C9JE40 543 aaKnown RBP19.27■□□□□ 0.68
CTDNEP1-211ENST00000575783 RNF113AO15541 343 aaKnown RBP19.27■□□□□ 0.68
CTDNEP1-211ENST00000575783 TXNP10599 105 aaKnown RBP19.27■□□□□ 0.68
CTDNEP1-211ENST00000575783 TCTN1Q2MV58 587 aa19.27■□□□□ 0.68
CTDNEP1-211ENST00000575783 PUS10Q3MIT2 529 aaKnown RBP19.27■□□□□ 0.68
CTDNEP1-211ENST00000575783 GDF6Q6KF10 455 aaPredicted RBP19.27■□□□□ 0.68
CTDNEP1-211ENST00000575783 IFNL3Q8IZI9 196 aa19.27■□□□□ 0.68
CTDNEP1-211ENST00000575783 FBXO22Q8NEZ5 403 aa19.27■□□□□ 0.68
CTDNEP1-211ENST00000575783 SCFD2Q8WU76 684 aa19.27■□□□□ 0.68
CTDNEP1-211ENST00000575783 C17orf80Q9BSJ5 609 aa19.27■□□□□ 0.68
CTDNEP1-211ENST00000575783 KCNH6Q9H252 994 aa19.27■□□□□ 0.68
CTDNEP1-211ENST00000575783 ABHD14A-ACY1A0A1B0GW23 586 aa19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 POTEB3A0JP26 581 aa19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 M0R2C6 588 aa19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 NBNO60934 754 aa19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 SLC3A2P08195 630 aaKnown RBP19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 SLC16A2P36021 539 aa19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 IKBKEQ14164 716 aa19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 CCDC96Q2M329 555 aa19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 POTEBQ6S5H4 581 aa19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 SLC30A10Q6XR72 485 aa19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 KBTBD3Q8NAB2 608 aa19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 ANKS1AQ92625 1134 aa19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 CTAGE1Q96RT6 745 aa19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 PLIN4Q96Q06 1357 aa19.26■□□□□ 0.67
CTDNEP1-211ENST00000575783 COL4A4P53420 1690 aaPredicted RBP19.25■□□□□ 0.67
CTDNEP1-211ENST00000575783 LOC102724159A0A0B4J2E5 919 aa19.25■□□□□ 0.67
CTDNEP1-211ENST00000575783 SMARCA5O60264 1052 aaPredicted RBP19.25■□□□□ 0.67
CTDNEP1-211ENST00000575783 NMT2O60551 498 aa19.25■□□□□ 0.67
CTDNEP1-211ENST00000575783 PWP2Q15269 919 aaKnown RBP19.25■□□□□ 0.67
CTDNEP1-211ENST00000575783 TTBK2Q6IQ55 1244 aa19.25■□□□□ 0.67
CTDNEP1-211ENST00000575783 NEK9Q8TD19 979 aa19.25■□□□□ 0.67
CTDNEP1-211ENST00000575783 DHX38Q92620 1227 aaKnown RBP19.25■□□□□ 0.67
CTDNEP1-211ENST00000575783 MPHOSPH6Q99547 160 aaKnown RBP19.25■□□□□ 0.67
CTDNEP1-211ENST00000575783 NACAP1Q9BZK3 213 aa19.25■□□□□ 0.67
CTDNEP1-211ENST00000575783 MYH4Q9Y623 1939 aa19.25■□□□□ 0.67
CTDNEP1-211ENST00000575783 TRIOO75962 3097 aa19.24■□□□□ 0.67
CTDNEP1-211ENST00000575783 TSPY2A6NKD2 308 aa19.24■□□□□ 0.67
CTDNEP1-211ENST00000575783 CXCL10P02778 98 aa19.24■□□□□ 0.67
CTDNEP1-211ENST00000575783 CKBP12277 381 aa19.24■□□□□ 0.67
CTDNEP1-211ENST00000575783 PPP4R3BQ5MIZ7 849 aa19.24■□□□□ 0.67
CTDNEP1-211ENST00000575783 RNF207Q6ZRF8 634 aa19.24■□□□□ 0.67
CTDNEP1-211ENST00000575783 HFE2Q6ZVN8 426 aa19.24■□□□□ 0.67
CTDNEP1-211ENST00000575783 AFG1LQ8WV93 481 aa19.24■□□□□ 0.67
CTDNEP1-211ENST00000575783 MRPL38Q96DV4 380 aaKnown RBP19.24■□□□□ 0.67
CTDNEP1-211ENST00000575783 RANBP17Q9H2T7 1088 aaKnown RBP19.24■□□□□ 0.67
CTDNEP1-211ENST00000575783 CTNNA3Q9UI47 895 aa19.24■□□□□ 0.67
CTDNEP1-211ENST00000575783 INSL6Q9Y581 213 aa19.24■□□□□ 0.67
CTDNEP1-211ENST00000575783 TET1Q8NFU7 2136 aa19.24■□□□□ 0.67
CTDNEP1-211ENST00000575783 EFCAB14O75071 495 aa19.23■□□□□ 0.67
CTDNEP1-211ENST00000575783 ARIH2O95376 493 aa19.23■□□□□ 0.67
CTDNEP1-211ENST00000575783 PARNO95453 639 aaKnown RBP19.23■□□□□ 0.67
CTDNEP1-211ENST00000575783 PPARAQ07869 468 aa19.23■□□□□ 0.67
CTDNEP1-211ENST00000575783 PTPROQ16827 1216 aa19.23■□□□□ 0.67
CTDNEP1-211ENST00000575783 LRRCC1Q9C099 1032 aa19.23■□□□□ 0.67
CTDNEP1-211ENST00000575783 INCENPQ9NQS7 918 aa19.23■□□□□ 0.67
CTDNEP1-211ENST00000575783 IL17RBQ9NRM6 502 aa19.23■□□□□ 0.67
CTDNEP1-211ENST00000575783 ECHDC1Q9NTX5 307 aa19.23■□□□□ 0.67
CTDNEP1-211ENST00000575783 ZFYP08048 801 aaPredicted RBP19.22■□□□□ 0.67
CTDNEP1-211ENST00000575783 ZP2Q05996 745 aa19.22■□□□□ 0.67
CTDNEP1-211ENST00000575783 SYDE2Q5VT97 1194 aa19.22■□□□□ 0.67
CTDNEP1-211ENST00000575783 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.22■□□□□ 0.67
CTDNEP1-211ENST00000575783 CHST3Q7LGC8 479 aa19.22■□□□□ 0.67
CTDNEP1-211ENST00000575783 BANK1Q8NDB2 785 aa19.22■□□□□ 0.67
CTDNEP1-211ENST00000575783 CLEC4DQ8WXI8 215 aa19.22■□□□□ 0.67
CTDNEP1-211ENST00000575783 MFSD14AQ96MC6 490 aa19.22■□□□□ 0.67
CTDNEP1-211ENST00000575783 NAPBQ9H115 298 aa19.22■□□□□ 0.67
CTDNEP1-211ENST00000575783 FAM50BQ9Y247 325 aa19.22■□□□□ 0.67
CTDNEP1-211ENST00000575783 USP34Q70CQ2 3546 aa19.22■□□□□ 0.67
CTDNEP1-211ENST00000575783 EDNRBP24530 442 aa19.21■□□□□ 0.67
CTDNEP1-211ENST00000575783 RPS6P62753 249 aaKnown RBP19.21■□□□□ 0.67
CTDNEP1-211ENST00000575783 SESTD1Q86VW0 696 aa19.21■□□□□ 0.67
CTDNEP1-211ENST00000575783 C7orf31Q8N865 590 aa19.21■□□□□ 0.67
CTDNEP1-211ENST00000575783 DCAF4Q8WV16 495 aa19.21■□□□□ 0.67
CTDNEP1-211ENST00000575783 KAT2BQ92831 832 aa19.21■□□□□ 0.67
CTDNEP1-211ENST00000575783 PHOX2BQ99453 314 aa19.21■□□□□ 0.67
CTDNEP1-211ENST00000575783 GPCPD1Q9NPB8 672 aa19.21■□□□□ 0.67
CTDNEP1-211ENST00000575783 ZBTB40Q9NUA8 1239 aa19.21■□□□□ 0.67
CTDNEP1-211ENST00000575783 SCN10AQ9Y5Y9 1956 aa19.21■□□□□ 0.67
CTDNEP1-211ENST00000575783 MMP3P08254 477 aa19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 CASTP20810 708 aaKnown RBP19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 LY6KQ17RY6 165 aa19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 EPC2Q52LR7 807 aa19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 TIGD5Q53EQ6 642 aa19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 TCEAL5Q5H9L2 206 aa19.2■□□□□ 0.66
CTDNEP1-211ENST00000575783 TSHZ3Q63HK5 1081 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms