RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 CTDP1Q9Y5B0 961 aaPredicted RBP9.47□□□□□ -0.89
RPAIN-215ENST00000575112 MYH7P12883 1935 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 ESYT3A0FGR9 886 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 MYO1FO00160 1098 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 EIF3JO75822 258 aaKnown RBP9.47□□□□□ -0.89
RPAIN-215ENST00000575112 AKR1B1P15121 316 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 GSTO1P78417 241 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 APBA1Q02410 837 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 SEC23AQ15436 765 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 ALX1Q15699 326 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 PRR16Q569H4 304 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 MIGA2Q7L4E1 593 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 ADAT2Q7Z6V5 191 aaKnown RBP9.47□□□□□ -0.89
RPAIN-215ENST00000575112 KSR1Q8IVT5 923 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 NARFQ9UHQ1 456 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 PKD1L3Q7Z443 1732 aa9.47□□□□□ -0.89
RPAIN-215ENST00000575112 NCK2O43639 380 aa9.46□□□□□ -0.89
RPAIN-215ENST00000575112 SV2BQ7L1I2 683 aa9.46□□□□□ -0.89
RPAIN-215ENST00000575112 LRRC1Q9BTT6 524 aa9.46□□□□□ -0.89
RPAIN-215ENST00000575112 MYH2Q9UKX2 1941 aa9.46□□□□□ -0.89
RPAIN-215ENST00000575112 RASSF10A6NK89 507 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 BACH1O14867 736 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 ZNF263O14978 683 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 RPS6KA4O75676 772 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 KRT14P02533 472 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 IVLP07476 585 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 IRAK1P51617 712 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 STK4Q13043 487 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 TUBGCP2Q9BSJ2 902 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 PHF20Q9BVI0 1012 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 IL17RBQ9NRM6 502 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 PCDHA4Q9UN74 947 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 USP17L10C9JJH3 530 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 APBA3O96018 575 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 GNA11P29992 359 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 GNAQP50148 359 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 PABPC4Q13310 644 aaKnown RBP eCLIP9.46□□□□□ -0.9
RPAIN-215ENST00000575112 PDCLQ13371 301 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 MAP9Q49MG5 647 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 ZFYVE27Q5T4F4 411 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 JAKMIP2Q96AA8 810 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 CTAGE1Q96RT6 745 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 MLXIPQ9HAP2 919 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 BCCIPQ9P287 314 aaKnown RBP eCLIP9.46□□□□□ -0.9
RPAIN-215ENST00000575112 KIAA1024Q9UPX6 916 aa9.46□□□□□ -0.9
RPAIN-215ENST00000575112 MYH6P13533 1939 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 PPFIA4O75335 1185 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 HLA-DOAP06340 250 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 OR52Z1P0C646 297 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 ERCC5P28715 1186 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-215ENST00000575112 TCP11X2Q5H9J9 407 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 SND1Q7KZF4 910 aaKnown RBP eCLIP9.45□□□□□ -0.9
RPAIN-215ENST00000575112 SH3RF1Q7Z6J0 888 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 CNGA4Q8IV77 575 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 BCAS4Q8TDM0 211 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 CAPN6Q9Y6Q1 641 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 FAM169AQ9Y6X4 670 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 GUCY2CP25092 1073 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 NPY5RQ15761 445 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 PFKFB3Q16875 520 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-215ENST00000575112 TADA2BQ86TJ2 420 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 MS4A14Q96JA4 679 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 CNOT6LQ96LI5 555 aaKnown RBP9.45□□□□□ -0.9
RPAIN-215ENST00000575112 QTRT2Q9H974 415 aaKnown RBP9.45□□□□□ -0.9
RPAIN-215ENST00000575112 RMND1Q9NWS8 449 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 PCDHB13Q9Y5F0 798 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 SAR1BQ9Y6B6 198 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 GRIN2DO15399 1336 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 BCL9O00512 1426 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 EPHB6O15197 1021 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 CLIC2O15247 247 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 GTPBP6O43824 516 aaPredicted RBP9.45□□□□□ -0.9
RPAIN-215ENST00000575112 RAD17O75943 681 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 C12orf60Q5U649 245 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 NEK8Q86SG6 692 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 GLIS3Q8NEA6 775 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 SALL4Q9UJQ4 1053 aa9.45□□□□□ -0.9
RPAIN-215ENST00000575112 THRAP3Q9Y2W1 955 aaKnown RBP9.45□□□□□ -0.9
RPAIN-215ENST00000575112 GLI3P10071 1580 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 E9PMD0 336 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 RPS6KA5O75582 802 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 BMP15O95972 392 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 ADCY7P51828 1080 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 KIF5AQ12840 1032 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 NFIAQ12857 509 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 HLTFQ14527 1009 aaKnown RBP eCLIP9.44□□□□□ -0.9
RPAIN-215ENST00000575112 WHAMMP3Q1A5X7 153 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 TTMPQ5BVD1 217 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 PRR5LQ6MZQ0 368 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 NFRKBQ6P4R8 1299 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 CYP26C1Q6V0L0 522 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 FBXO33Q7Z6M2 555 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 RBM17Q96I25 401 aaKnown RBP9.44□□□□□ -0.9
RPAIN-215ENST00000575112 SPAG5Q96R06 1193 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 RUFY1Q96T51 708 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 BRIP1Q9BX63 1249 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 TRIM31Q9BZY9 425 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.44□□□□□ -0.9
RPAIN-215ENST00000575112 PCDHA1Q9Y5I3 950 aa9.44□□□□□ -0.9
RPAIN-215ENST00000575112 TMEM110-MUSTN1A8MSY1 372 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms