RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 PDIA5Q14554 519 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 MCM6Q14566 821 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 DALRD3Q5D0E6 543 aaKnown RBP11.73□□□□□ -0.53
USP43-205ENST00000574408 CEP135Q66GS9 1140 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 SV2BQ7L1I2 683 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 GIMAP8Q8ND71 665 aaPredicted RBP11.73□□□□□ -0.53
USP43-205ENST00000574408 ANKRD20A12PQ8NF67 263 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 C7orf25Q9BPX7 421 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 BLOC1S4Q9NUP1 217 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.73□□□□□ -0.53
USP43-205ENST00000574408 MEIS2O14770 477 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 N4BP3O15049 544 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 SPAG1Q07617 926 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 NYAP1Q6ZVC0 841 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 TC2NQ8N9U0 490 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 VPS33BQ9H267 617 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 TAOK3Q9H2K8 898 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 TAB2Q9NYJ8 693 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 STK17AQ9UEE5 414 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 SHTN1A0MZ66 631 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 KCNJ18B7U540 433 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 KCNJ6P48051 423 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 PMS1P54277 932 aaKnown RBP11.73□□□□□ -0.53
USP43-205ENST00000574408 KCNJ12Q14500 433 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 ZYXQ15942 572 aaKnown RBP11.73□□□□□ -0.53
USP43-205ENST00000574408 NBPF9Q3BBW0 867 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 KIAA1755Q5JYT7 1200 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 CIAPIN1Q6FI81 312 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 JDP2Q8WYK2 163 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 LARP4BQ92615 738 aaKnown RBP11.73□□□□□ -0.53
USP43-205ENST00000574408 PPP1R13BQ96KQ4 1090 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 TRIM47Q96LD4 638 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 NAP1L4Q99733 375 aaKnown RBP11.73□□□□□ -0.53
USP43-205ENST00000574408 VPS16Q9H269 839 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 TMX1Q9H3N1 280 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 KCND1Q9NSA2 647 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 PRR12Q9ULL5 1215 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 PCDHA12Q9UN75 941 aa11.73□□□□□ -0.53
USP43-205ENST00000574408 SCAF8Q9UPN6 1271 aaKnown RBP11.73□□□□□ -0.53
USP43-205ENST00000574408 AP3B2Q13367 1082 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 FAM83BQ5T0W9 1011 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
USP43-205ENST00000574408 BTNL9Q6UXG8 535 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 P2RX7Q99572 595 aaKnown RBP11.72□□□□□ -0.53
USP43-205ENST00000574408 LIMA1Q9UHB6 759 aaKnown RBP11.72□□□□□ -0.53
USP43-205ENST00000574408 ARFGEF1Q9Y6D6 1849 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 PSDA5PKW4 1024 aaPredicted RBP11.72□□□□□ -0.53
USP43-205ENST00000574408 H7C1D1 291 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 FCER1AP12319 257 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 POLD1P28340 1107 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 STAT2P52630 851 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 COPB1P53618 953 aaKnown RBP11.72□□□□□ -0.53
USP43-205ENST00000574408 TGFB2P61812 414 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 STK4Q13043 487 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 TCP11X2Q5H9J9 407 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 CPLX3Q8WVH0 158 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 BAG1Q99933 345 aaPredicted RBP11.72□□□□□ -0.53
USP43-205ENST00000574408 GOPCQ9HD26 462 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 TMX2Q9Y320 296 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 MYMKA6NI61 221 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 SPDYE3A6NKU9 549 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 WNT10BO00744 389 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 DYNC1I1O14576 645 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 USP11P51784 963 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 ARHGAP4P98171 946 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 DYMQ7RTS9 669 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 KCNK18Q7Z418 384 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 PPFIBP1Q86W92 1011 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 TMEM139Q8IV31 216 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 MTMR14Q8NCE2 650 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 HPS3Q969F9 1004 aa11.72□□□□□ -0.53
USP43-205ENST00000574408 HOXA13P31271 388 aaPredicted RBP11.71□□□□□ -0.53
USP43-205ENST00000574408 SEMA3FQ13275 785 aa11.71□□□□□ -0.53
USP43-205ENST00000574408 CCDC84Q86UT8 332 aaPredicted RBP11.71□□□□□ -0.53
USP43-205ENST00000574408 RAD54LQ92698 747 aa11.71□□□□□ -0.53
USP43-205ENST00000574408 SYNPO2Q9UMS6 1093 aa11.71□□□□□ -0.53
USP43-205ENST00000574408 AKR1B15C9JRZ8 316 aaPredicted RBP11.71□□□□□ -0.54
USP43-205ENST00000574408 ARHGAP6O43182 974 aa11.71□□□□□ -0.54
USP43-205ENST00000574408 PBX1P40424 430 aa11.71□□□□□ -0.54
USP43-205ENST00000574408 TMEM119Q4V9L6 283 aa11.71□□□□□ -0.54
USP43-205ENST00000574408 PRR16Q569H4 304 aa11.71□□□□□ -0.54
USP43-205ENST00000574408 FAM83AQ86UY5 434 aa11.71□□□□□ -0.54
USP43-205ENST00000574408 SRRTQ9BXP5 876 aaKnown RBP11.71□□□□□ -0.54
USP43-205ENST00000574408 IDEP14735 1019 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 RBL2Q08999 1139 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 ECM1Q16610 540 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 CNNM4Q6P4Q7 775 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 IRF2BP1Q8IU81 584 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 EEF2KMTQ96G04 330 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 DHTKD1Q96HY7 919 aaPredicted RBP11.7□□□□□ -0.54
USP43-205ENST00000574408 SLC39A2Q9NP94 309 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 MYOZ2Q9NPC6 264 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 LRRC10BA6NIK2 292 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 PES1O00541 588 aaKnown RBP11.7□□□□□ -0.54
USP43-205ENST00000574408 SSBP05455 408 aaKnown RBP eCLIP11.7□□□□□ -0.54
USP43-205ENST00000574408 NAA30Q147X3 362 aaPredicted RBP11.7□□□□□ -0.54
USP43-205ENST00000574408 TTI2Q6NXR4 508 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 CCDC174Q6PII3 467 aa11.7□□□□□ -0.54
USP43-205ENST00000574408 KIFC2Q96AC6 838 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms