RNA–Protein interactions for RNA: ENST00000574151.5

HCFC1R1-206, Transcript of host cell factor C1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC1R1, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-206ENST00000574151 ZNF292O60281 2723 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 GOLIM4O00461 696 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 MPHOSPH10O00566 681 aaKnown RBP11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 GALR2O43603 387 aaPredicted RBP11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 TNKSO95271 1327 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 PDGFBP01127 241 aaPredicted RBP11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 IQCF3P0C7M6 154 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 PLCG2P16885 1265 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 WDR5P61964 334 aaKnown RBP11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 DLX2Q07687 328 aaPredicted RBP11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 SIGLEC14Q08ET2 396 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 FSCN1Q16658 493 aaKnown RBP11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 PTPROQ16827 1216 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 ST3GAL2Q16842 350 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 KLHL40Q2TBA0 621 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 NBPF20Q3BBV1 942 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 RPAINQ86UA6 219 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 CERS3Q8IU89 383 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 RETREG2Q8NC44 543 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 PPP1R13LQ8WUF5 828 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 INTS4Q96HW7 963 aaKnown RBP11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 RAD9AQ99638 391 aa11.73□□□□□ -0.53
HCFC1R1-206ENST00000574151 DYNC1LI2O43237 492 aaPredicted RBP11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 IDH1O75874 414 aaKnown RBP11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 BAIAP3O94812 1187 aa11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 SUPT20HL2P0C7V6 817 aa11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 RFC2P35250 354 aa11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 MCAMP43121 646 aa11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 ZAP70P43403 619 aa11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 TNFAIP2Q03169 654 aa11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 TIGD5Q53EQ6 642 aa11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 NAA16Q6N069 864 aaPredicted RBP11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 ADGRA1Q86SQ6 560 aa11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 RUFY2Q8WXA3 655 aa11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 TNPO1Q92973 898 aaKnown RBP11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 ASIC4Q96FT7 647 aa11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 KIF2CQ99661 725 aa11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 SERPINB13Q9UIV8 391 aa11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.72□□□□□ -0.53
HCFC1R1-206ENST00000574151 MICAL3Q7RTP6 2002 aa11.71□□□□□ -0.53
HCFC1R1-206ENST00000574151 ZEB2O60315 1214 aa11.71□□□□□ -0.53
HCFC1R1-206ENST00000574151 GJB5O95377 273 aa11.71□□□□□ -0.53
HCFC1R1-206ENST00000574151 SDSP20132 328 aa11.71□□□□□ -0.53
HCFC1R1-206ENST00000574151 DYNLL1P63167 89 aaKnown RBP11.71□□□□□ -0.53
HCFC1R1-206ENST00000574151 ARMCX2Q7L311 632 aa11.71□□□□□ -0.53
HCFC1R1-206ENST00000574151 TLK2Q86UE8 772 aa11.71□□□□□ -0.53
HCFC1R1-206ENST00000574151 KIAA2013Q8IYS2 634 aa11.71□□□□□ -0.53
HCFC1R1-206ENST00000574151 SEZ6LQ9BYH1 1024 aa11.71□□□□□ -0.53
HCFC1R1-206ENST00000574151 AP5M1Q9H0R1 490 aa11.71□□□□□ -0.53
HCFC1R1-206ENST00000574151 NSUN3Q9H649 340 aaKnown RBP11.71□□□□□ -0.53
HCFC1R1-206ENST00000574151 FBXO28Q9NVF7 368 aa11.71□□□□□ -0.53
HCFC1R1-206ENST00000574151 NAV1Q8NEY1 1877 aa11.71□□□□□ -0.53
HCFC1R1-206ENST00000574151 CEP250Q9BV73 2442 aa11.7□□□□□ -0.54
HCFC1R1-206ENST00000574151 MBD3O95983 291 aa11.7□□□□□ -0.54
HCFC1R1-206ENST00000574151 SHMT1P34896 483 aa11.7□□□□□ -0.54
HCFC1R1-206ENST00000574151 PPP4CP60510 307 aa11.7□□□□□ -0.54
HCFC1R1-206ENST00000574151 NKX3-2P78367 333 aa11.7□□□□□ -0.54
HCFC1R1-206ENST00000574151 GPM6BQ13491 265 aa11.7□□□□□ -0.54
HCFC1R1-206ENST00000574151 PUM1Q14671 1186 aaKnown RBP eCLIP11.7□□□□□ -0.54
HCFC1R1-206ENST00000574151 FAM47CQ5HY64 1035 aa11.7□□□□□ -0.54
HCFC1R1-206ENST00000574151 SLC9C2Q5TAH2 1124 aa11.7□□□□□ -0.54
HCFC1R1-206ENST00000574151 KBTBD3Q8NAB2 608 aa11.7□□□□□ -0.54
HCFC1R1-206ENST00000574151 PI4K2BQ8TCG2 481 aa11.7□□□□□ -0.54
HCFC1R1-206ENST00000574151 OTUD7AQ8TE49 926 aaPredicted RBP11.7□□□□□ -0.54
HCFC1R1-206ENST00000574151 DIAPH3Q9NSV4 1193 aa11.7□□□□□ -0.54
HCFC1R1-206ENST00000574151 SALL3Q9BXA9 1300 aa11.69□□□□□ -0.54
HCFC1R1-206ENST00000574151 DNAJC25-GNG10A0A024R161 153 aa11.69□□□□□ -0.54
HCFC1R1-206ENST00000574151 CYP2E1P05181 493 aaPredicted RBP11.69□□□□□ -0.54
HCFC1R1-206ENST00000574151 COL19A1Q14993 1142 aa11.69□□□□□ -0.54
HCFC1R1-206ENST00000574151 TSHZ3Q63HK5 1081 aa11.69□□□□□ -0.54
HCFC1R1-206ENST00000574151 CLEC10AQ8IUN9 316 aa11.69□□□□□ -0.54
HCFC1R1-206ENST00000574151 CCDC144CPQ8IYA2 1237 aa11.69□□□□□ -0.54
HCFC1R1-206ENST00000574151 SYAP1Q96A49 352 aaPredicted RBP11.69□□□□□ -0.54
HCFC1R1-206ENST00000574151 IGFLR1Q9H665 355 aa11.69□□□□□ -0.54
HCFC1R1-206ENST00000574151 ZNF214Q9UL59 606 aaPredicted RBP11.69□□□□□ -0.54
HCFC1R1-206ENST00000574151 ADAMTS5Q9UNA0 930 aa11.69□□□□□ -0.54
HCFC1R1-206ENST00000574151 GNEQ9Y223 722 aaKnown RBP11.69□□□□□ -0.54
HCFC1R1-206ENST00000574151 RIPK3Q9Y572 518 aa11.69□□□□□ -0.54
HCFC1R1-206ENST00000574151 VWA5AO00534 786 aa11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 RNF113AO15541 343 aaKnown RBP11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 USP5P45974 858 aa11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 SMAD4Q13485 552 aaKnown RBP11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 UBE3CQ15386 1083 aa11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 EPC2Q52LR7 807 aa11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 TMEM63BQ5T3F8 832 aa11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 ZNF467Q7Z7K2 595 aaPredicted RBP11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 TRIM44Q96DX7 344 aaPredicted RBP11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 FGD4Q96M96 766 aa11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 KATNBL1Q9H079 304 aa11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 GRPEL1Q9HAV7 217 aa11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 CD207Q9UJ71 328 aa11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 FASNP49327 2511 aaKnown RBP11.68□□□□□ -0.54
HCFC1R1-206ENST00000574151 RAD21O60216 631 aa11.67□□□□□ -0.54
HCFC1R1-206ENST00000574151 SMPD1P17405 629 aa11.67□□□□□ -0.54
HCFC1R1-206ENST00000574151 CYP7A1P22680 504 aa11.67□□□□□ -0.54
HCFC1R1-206ENST00000574151 GTF2F1P35269 517 aaKnown RBP eCLIP11.67□□□□□ -0.54
HCFC1R1-206ENST00000574151 PLCD1P51178 756 aa11.67□□□□□ -0.54
HCFC1R1-206ENST00000574151 NUBP1P53384 320 aa11.67□□□□□ -0.54
HCFC1R1-206ENST00000574151 CCDC173Q0VFZ6 552 aa11.67□□□□□ -0.54
HCFC1R1-206ENST00000574151 ACAP1Q15027 740 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms