RNA–Protein interactions for RNA: ENST00000573924.1

RPA1-205, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 574 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-205ENST00000573924 LMCD1Q9NZU5 365 aa8.56□□□□□ -1.04
RPA1-205ENST00000573924 NOD1Q9Y239 953 aa8.56□□□□□ -1.04
RPA1-205ENST00000573924 COL11A1P12107 1806 aaPredicted RBP8.56□□□□□ -1.04
RPA1-205ENST00000573924 LAMA2P24043 3122 aaKnown RBP8.56□□□□□ -1.04
RPA1-205ENST00000573924 NCOR1O75376 2440 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 PARP14Q460N5 1801 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 MYADML2A6NDP7 307 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 MINDY4BA8MYZ0 360 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 DYNC1LI2O43237 492 aaPredicted RBP8.55□□□□□ -1.04
RPA1-205ENST00000573924 PRKAB2O43741 272 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 BAIAP3O94812 1187 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 APPP05067 770 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 TSPY3P0CV98 308 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 TSPY8P0CW00 308 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 SLC1A4P43007 532 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 TDO2P48775 406 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 CCL23P55773 120 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 QPCTQ16769 361 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 BOLA2Q9H3K6 86 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 HOMER2Q9NSB8 354 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 RNF146Q9NTX7 359 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 LHX6Q9UPM6 363 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 RIPK3Q9Y572 518 aa8.55□□□□□ -1.04
RPA1-205ENST00000573924 NKRFO15226 690 aaKnown RBP eCLIP8.54□□□□□ -1.04
RPA1-205ENST00000573924 PLA2G6O60733 806 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 GPR37L1O60883 481 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 EFCAB14O75071 495 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 RASA1P20936 1047 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 BEX3Q00994 111 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 PTPN11Q06124 597 aaPredicted RBP8.54□□□□□ -1.04
RPA1-205ENST00000573924 CSPP1Q1MSJ5 1256 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 PUS10Q3MIT2 529 aaKnown RBP8.54□□□□□ -1.04
RPA1-205ENST00000573924 SLFN13Q68D06 897 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 KIAA1211Q6ZU35 1233 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 FAM133AQ8N9E0 248 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 RDH13Q8NBN7 331 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 STAG1Q8WVM7 1258 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 GMCL1Q96IK5 515 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 TRERF1Q96PN7 1200 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 NUP88Q99567 741 aaPredicted RBP8.54□□□□□ -1.04
RPA1-205ENST00000573924 MTG1Q9BT17 334 aaPredicted RBP8.54□□□□□ -1.04
RPA1-205ENST00000573924 ZBED2Q9BTP6 218 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 FTOQ9C0B1 505 aaKnown RBP eCLIP8.54□□□□□ -1.04
RPA1-205ENST00000573924 BCL11AQ9H165 835 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 TRPV6Q9H1D0 765 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 ALDH8A1Q9H2A2 487 aaPredicted RBP8.54□□□□□ -1.04
RPA1-205ENST00000573924 MTMR4Q9NYA4 1195 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 DDX19BQ9UMR2 479 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 GNEQ9Y223 722 aaKnown RBP8.54□□□□□ -1.04
RPA1-205ENST00000573924 FAM50BQ9Y247 325 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 YBX2Q9Y2T7 364 aaKnown RBP8.54□□□□□ -1.04
RPA1-205ENST00000573924 TNKSO95271 1327 aa8.54□□□□□ -1.04
RPA1-205ENST00000573924 CYP2D7A0A087X1C5 515 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 TMEM232C9JQI7 657 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 B4GALT4O60513 344 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 CA3P07451 260 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 ALAS1P13196 640 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 ALADP13716 330 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 RABGGTBP53611 331 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 DUSP28Q4G0W2 176 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 FAM47CQ5HY64 1035 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 RCSD1Q6JBY9 416 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 NFRKBQ6P4R8 1299 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 KHSRPQ92945 711 aaKnown RBP eCLIP8.53□□□□□ -1.04
RPA1-205ENST00000573924 STRBPQ96SI9 672 aaKnown RBP8.53□□□□□ -1.04
RPA1-205ENST00000573924 CRBNQ96SW2 442 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 LRFN3Q9BTN0 628 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 LRRCC1Q9C099 1032 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 A1CFQ9NQ94 594 aaKnown RBP8.53□□□□□ -1.04
RPA1-205ENST00000573924 CTNNA3Q9UI47 895 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 TNNQ9UQP3 1299 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 MTCH2Q9Y6C9 303 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 MYO9BQ13459 2157 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 CDH23Q9H251 3354 aa8.53□□□□□ -1.04
RPA1-205ENST00000573924 TLL1O43897 1013 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 SMPD1P17405 629 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 NDUFV2P19404 249 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 GCGRP47871 477 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 KCNQ1P51787 676 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 CNTN2Q02246 1040 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 TFF2Q03403 129 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 DEFB128Q7Z7B8 93 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 HERC6Q8IVU3 1022 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 NEDD1Q8NHV4 660 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 CAGE1Q8TC20 777 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 SCFD2Q8WU76 684 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 ARNTL2Q8WYA1 636 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 APPBP2Q92624 585 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 CEP95Q96GE4 821 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 AGBL1Q96MI9 1066 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 WDR11Q9BZH6 1224 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 KATNBL1Q9H079 304 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 KCNH6Q9H252 994 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 ECHDC1Q9NTX5 307 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 CYP39A1Q9NYL5 469 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 CCPG1Q9ULG6 757 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 PCDHB15Q9Y5E8 787 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 BAZ2AQ9UIF9 1905 aaKnown RBP8.52□□□□□ -1.05
RPA1-205ENST00000573924 EYSQ5T1H1 3165 aa8.52□□□□□ -1.05
RPA1-205ENST00000573924 BDP1A6H8Y1 2624 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms