RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 KCNA10Q16322 511 aa32.09■■■□□ 2.73
SCARF1-207ENST00000573867 SLC39A5Q6ZMH5 540 aa32.09■■■□□ 2.73
SCARF1-207ENST00000573867 NOL8Q76FK4 1167 aaKnown RBP32.09■■■□□ 2.73
SCARF1-207ENST00000573867 PXMP2Q9NR77 195 aa32.09■■■□□ 2.73
SCARF1-207ENST00000573867 RBM28Q9NW13 759 aaKnown RBP32.09■■■□□ 2.73
SCARF1-207ENST00000573867 CEP290O15078 2479 aa32.09■■■□□ 2.73
SCARF1-207ENST00000573867 A0A1W2PQ45 241 aaPredicted RBP32.08■■■□□ 2.73
SCARF1-207ENST00000573867 A0A1W2PQY0 241 aa32.08■■■□□ 2.73
SCARF1-207ENST00000573867 RUFY3Q7L099 469 aa32.08■■■□□ 2.73
SCARF1-207ENST00000573867 TLK2Q86UE8 772 aa32.08■■■□□ 2.73
SCARF1-207ENST00000573867 TSEN34Q9BSV6 310 aaKnown RBP32.08■■■□□ 2.73
SCARF1-207ENST00000573867 SEC63Q9UGP8 760 aaKnown RBP32.08■■■□□ 2.73
SCARF1-207ENST00000573867 GCOM1H8Y6P7 765 aaPredicted RBP32.07■■■□□ 2.72
SCARF1-207ENST00000573867 POLR2MP0CAP2 368 aa32.07■■■□□ 2.72
SCARF1-207ENST00000573867 ACLYP53396 1101 aa32.07■■■□□ 2.72
SCARF1-207ENST00000573867 RCAN1P53805 252 aa32.07■■■□□ 2.72
SCARF1-207ENST00000573867 BEX3Q00994 111 aa32.07■■■□□ 2.72
SCARF1-207ENST00000573867 SNX17Q15036 470 aa32.07■■■□□ 2.72
SCARF1-207ENST00000573867 ARHGEF16Q5VV41 709 aa32.07■■■□□ 2.72
SCARF1-207ENST00000573867 WDR11Q9BZH6 1224 aa32.07■■■□□ 2.72
SCARF1-207ENST00000573867 MAP3K20Q9NYL2 800 aaKnown RBP32.07■■■□□ 2.72
SCARF1-207ENST00000573867 ZMYND8Q9ULU4 1186 aaPredicted RBP32.07■■■□□ 2.72
SCARF1-207ENST00000573867 NAP1L2Q9ULW6 460 aaPredicted RBP32.07■■■□□ 2.72
SCARF1-207ENST00000573867 DYNC1LI2O43237 492 aaPredicted RBP32.06■■■□□ 2.72
SCARF1-207ENST00000573867 SEC24BO95487 1268 aa32.06■■■□□ 2.72
SCARF1-207ENST00000573867 RTP1P59025 263 aa32.06■■■□□ 2.72
SCARF1-207ENST00000573867 TOB2Q14106 344 aaPredicted RBP32.06■■■□□ 2.72
SCARF1-207ENST00000573867 DUSP28Q4G0W2 176 aa32.06■■■□□ 2.72
SCARF1-207ENST00000573867 SAMD3Q8N6K7 520 aa32.06■■■□□ 2.72
SCARF1-207ENST00000573867 IL31RAQ8NI17 732 aa32.06■■■□□ 2.72
SCARF1-207ENST00000573867 IWS1Q96ST2 819 aa32.06■■■□□ 2.72
SCARF1-207ENST00000573867 MPHOSPH6Q99547 160 aaKnown RBP32.06■■■□□ 2.72
SCARF1-207ENST00000573867 UPF3BQ9BZI7 483 aaKnown RBP32.06■■■□□ 2.72
SCARF1-207ENST00000573867 TM6SF1Q9BZW5 370 aa32.06■■■□□ 2.72
SCARF1-207ENST00000573867 ARIH2O95376 493 aa32.05■■■□□ 2.72
SCARF1-207ENST00000573867 ADD1P35611 737 aaKnown RBP32.05■■■□□ 2.72
SCARF1-207ENST00000573867 PDCD2LQ9BRP1 358 aa32.05■■■□□ 2.72
SCARF1-207ENST00000573867 NID2Q14112 1375 aa32.05■■■□□ 2.72
SCARF1-207ENST00000573867 ASGR1P07306 291 aa32.04■■■□□ 2.72
SCARF1-207ENST00000573867 NR3C2P08235 984 aa32.04■■■□□ 2.72
SCARF1-207ENST00000573867 GNASQ5JWF2 1037 aa32.04■■■□□ 2.72
SCARF1-207ENST00000573867 FCHSD1Q86WN1 690 aa32.04■■■□□ 2.72
SCARF1-207ENST00000573867 GPKOWQ92917 476 aaPredicted RBP eCLIP32.04■■■□□ 2.72
SCARF1-207ENST00000573867 SPC25Q9HBM1 224 aa32.04■■■□□ 2.72
SCARF1-207ENST00000573867 MOXD2PA6NHM9 499 aa32.03■■■□□ 2.72
SCARF1-207ENST00000573867 B4DLN1 442 aa32.03■■■□□ 2.72
SCARF1-207ENST00000573867 SYN1P17600 705 aa32.03■■■□□ 2.72
SCARF1-207ENST00000573867 METAP2P50579 478 aaKnown RBP eCLIP32.03■■■□□ 2.72
SCARF1-207ENST00000573867 MRPL12P52815 198 aaKnown RBP32.03■■■□□ 2.72
SCARF1-207ENST00000573867 TRIM60Q495X7 471 aa32.03■■■□□ 2.72
SCARF1-207ENST00000573867 USP17L6PQ6QN14 398 aa32.03■■■□□ 2.72
SCARF1-207ENST00000573867 SCFD2Q8WU76 684 aa32.03■■■□□ 2.72
SCARF1-207ENST00000573867 COPS5Q92905 334 aa32.03■■■□□ 2.72
SCARF1-207ENST00000573867 Q9Y3F1 56 aa32.03■■■□□ 2.72
SCARF1-207ENST00000573867 CYP46A1Q9Y6A2 500 aa32.03■■■□□ 2.72
SCARF1-207ENST00000573867 MEIS2O14770 477 aa32.02■■■□□ 2.72
SCARF1-207ENST00000573867 EVCP57679 992 aa32.02■■■□□ 2.72
SCARF1-207ENST00000573867 STXBP2Q15833 593 aa32.02■■■□□ 2.72
SCARF1-207ENST00000573867 FSCN1Q16658 493 aaKnown RBP32.02■■■□□ 2.72
SCARF1-207ENST00000573867 CCDC62Q6P9F0 684 aa32.02■■■□□ 2.72
SCARF1-207ENST00000573867 AP5M1Q9H0R1 490 aa32.02■■■□□ 2.72
SCARF1-207ENST00000573867 ATP11BQ9Y2G3 1177 aa32.02■■■□□ 2.72
SCARF1-207ENST00000573867 PGM5Q15124 567 aa32.01■■■□□ 2.71
SCARF1-207ENST00000573867 PPP2R5BQ15173 497 aa32.01■■■□□ 2.71
SCARF1-207ENST00000573867 WWC2Q6AWC2 1192 aa32.01■■■□□ 2.71
SCARF1-207ENST00000573867 TYW1BQ6NUM6 668 aa32.01■■■□□ 2.71
SCARF1-207ENST00000573867 SEPT14Q6ZU15 432 aa32.01■■■□□ 2.71
SCARF1-207ENST00000573867 HEATR3Q7Z4Q2 680 aa32.01■■■□□ 2.71
SCARF1-207ENST00000573867 PCSK9Q8NBP7 692 aaKnown RBP32.01■■■□□ 2.71
SCARF1-207ENST00000573867 V9GY48 417 aaPredicted RBP32.01■■■□□ 2.71
SCARF1-207ENST00000573867 FRMPD4Q14CM0 1322 aa32■■■□□ 2.71
SCARF1-207ENST00000573867 RANBP2P49792 3224 aaKnown RBP32■■■□□ 2.71
SCARF1-207ENST00000573867 RGS20O76081 388 aa32■■■□□ 2.71
SCARF1-207ENST00000573867 C1orf53Q5VUE5 145 aa32■■■□□ 2.71
SCARF1-207ENST00000573867 ZFP91Q96JP5 570 aaPredicted RBP32■■■□□ 2.71
SCARF1-207ENST00000573867 LARP6Q9BRS8 491 aaKnown RBP32■■■□□ 2.71
SCARF1-207ENST00000573867 PIK3CDO00329 1044 aa31.99■■■□□ 2.71
SCARF1-207ENST00000573867 TXNP10599 105 aaKnown RBP31.99■■■□□ 2.71
SCARF1-207ENST00000573867 MYCLP12524 364 aaPredicted RBP31.99■■■□□ 2.71
SCARF1-207ENST00000573867 PDIA3P30101 505 aaKnown RBP31.99■■■□□ 2.71
SCARF1-207ENST00000573867 CHRDL2Q6WN34 429 aa31.99■■■□□ 2.71
SCARF1-207ENST00000573867 VSIG10LQ86VR7 867 aa31.99■■■□□ 2.71
SCARF1-207ENST00000573867 STARD7Q9NQZ5 370 aa31.99■■■□□ 2.71
SCARF1-207ENST00000573867 COLQQ9Y215 455 aaPredicted RBP31.99■■■□□ 2.71
SCARF1-207ENST00000573867 EIF3JO75822 258 aaKnown RBP31.98■■■□□ 2.71
SCARF1-207ENST00000573867 CXCL17Q6UXB2 119 aa31.98■■■□□ 2.71
SCARF1-207ENST00000573867 OR6J1Q8NGC5 347 aa31.98■■■□□ 2.71
SCARF1-207ENST00000573867 PRO3102Q9H379 93 aa31.98■■■□□ 2.71
SCARF1-207ENST00000573867 TLE2Q04725 743 aa31.97■■■□□ 2.71
SCARF1-207ENST00000573867 TTLL4Q14679 1199 aa31.97■■■□□ 2.71
SCARF1-207ENST00000573867 UBE2SQ16763 222 aa31.97■■■□□ 2.71
SCARF1-207ENST00000573867 LY6KQ17RY6 165 aa31.97■■■□□ 2.71
SCARF1-207ENST00000573867 PSTPIP2Q9H939 334 aa31.97■■■□□ 2.71
SCARF1-207ENST00000573867 NCOA5Q9HCD5 579 aaKnown RBP31.97■■■□□ 2.71
SCARF1-207ENST00000573867 KIAA1217Q5T5P2 1943 aa31.96■■■□□ 2.71
SCARF1-207ENST00000573867 NTRK3Q16288 839 aa31.96■■■□□ 2.71
SCARF1-207ENST00000573867 C8orf34Q49A92 452 aa31.96■■■□□ 2.71
SCARF1-207ENST00000573867 GLT1D1Q96MS3 346 aa31.96■■■□□ 2.71
SCARF1-207ENST00000573867 ELP1O95163 1332 aa31.96■■■□□ 2.71
SCARF1-207ENST00000573867 STXBP3O00186 592 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms