RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 AP5M1Q9H0R1 490 aa23.87■■□□□ 1.41
CHMP6-204ENST00000572778 PXMP2Q9NR77 195 aa23.87■■□□□ 1.41
CHMP6-204ENST00000572778 PHF24Q9UPV7 400 aa23.87■■□□□ 1.41
CHMP6-204ENST00000572778 GNEQ9Y223 722 aaKnown RBP23.87■■□□□ 1.41
CHMP6-204ENST00000572778 DYNC1LI2O43237 492 aaPredicted RBP23.86■■□□□ 1.41
CHMP6-204ENST00000572778 PTGS1P23219 599 aa23.86■■□□□ 1.41
CHMP6-204ENST00000572778 CDC27P30260 824 aa23.86■■□□□ 1.41
CHMP6-204ENST00000572778 STXBP2Q15833 593 aa23.86■■□□□ 1.41
CHMP6-204ENST00000572778 KCNA10Q16322 511 aa23.86■■□□□ 1.41
CHMP6-204ENST00000572778 GNASQ5JWF2 1037 aa23.86■■□□□ 1.41
CHMP6-204ENST00000572778 TSEN34Q9BSV6 310 aaKnown RBP23.86■■□□□ 1.41
CHMP6-204ENST00000572778 AGXT2Q9BYV1 514 aa23.86■■□□□ 1.41
CHMP6-204ENST00000572778 UPF3AQ9H1J1 476 aaKnown RBP23.86■■□□□ 1.41
CHMP6-204ENST00000572778 FAM217BQ9NTX9 383 aaPredicted RBP23.86■■□□□ 1.41
CHMP6-204ENST00000572778 LCTP09848 1927 aa23.86■■□□□ 1.41
CHMP6-204ENST00000572778 PDE4DIPQ5VU43 2346 aa23.85■■□□□ 1.41
CHMP6-204ENST00000572778 CNTNAP5Q8WYK1 1306 aa23.85■■□□□ 1.41
CHMP6-204ENST00000572778 ADD1P35611 737 aaKnown RBP23.85■■□□□ 1.41
CHMP6-204ENST00000572778 SLC39A5Q6ZMH5 540 aa23.85■■□□□ 1.41
CHMP6-204ENST00000572778 HEATR3Q7Z4Q2 680 aa23.85■■□□□ 1.41
CHMP6-204ENST00000572778 TLK2Q86UE8 772 aa23.85■■□□□ 1.41
CHMP6-204ENST00000572778 MCM3APO60318 1980 aa23.84■■□□□ 1.41
CHMP6-204ENST00000572778 CCDC196A0A1B0GTZ2 297 aa23.84■■□□□ 1.41
CHMP6-204ENST00000572778 RBM47A0AV96 593 aaKnown RBP23.84■■□□□ 1.41
CHMP6-204ENST00000572778 NR3C2P08235 984 aa23.84■■□□□ 1.41
CHMP6-204ENST00000572778 MYCLP12524 364 aaPredicted RBP23.84■■□□□ 1.41
CHMP6-204ENST00000572778 CST5P28325 142 aaPredicted RBP23.84■■□□□ 1.41
CHMP6-204ENST00000572778 ACLYP53396 1101 aa23.84■■□□□ 1.41
CHMP6-204ENST00000572778 BEX3Q00994 111 aa23.84■■□□□ 1.41
CHMP6-204ENST00000572778 PPP2R5BQ15173 497 aa23.84■■□□□ 1.41
CHMP6-204ENST00000572778 DUSP28Q4G0W2 176 aa23.84■■□□□ 1.41
CHMP6-204ENST00000572778 SEPT14Q6ZU15 432 aa23.84■■□□□ 1.41
CHMP6-204ENST00000572778 PCSK9Q8NBP7 692 aaKnown RBP23.84■■□□□ 1.41
CHMP6-204ENST00000572778 SCFD2Q8WU76 684 aa23.84■■□□□ 1.41
CHMP6-204ENST00000572778 CUL5Q93034 780 aa23.84■■□□□ 1.41
CHMP6-204ENST00000572778 V9GY48 417 aaPredicted RBP23.84■■□□□ 1.41
CHMP6-204ENST00000572778 A0A1W2PQ45 241 aaPredicted RBP23.83■■□□□ 1.41
CHMP6-204ENST00000572778 A0A1W2PQY0 241 aa23.83■■□□□ 1.41
CHMP6-204ENST00000572778 MOXD2PA6NHM9 499 aa23.83■■□□□ 1.41
CHMP6-204ENST00000572778 ASGR1P07306 291 aa23.83■■□□□ 1.41
CHMP6-204ENST00000572778 RTP1P59025 263 aa23.83■■□□□ 1.41
CHMP6-204ENST00000572778 FUT2Q10981 343 aa23.83■■□□□ 1.41
CHMP6-204ENST00000572778 CCSAPQ6IQ19 270 aaPredicted RBP23.83■■□□□ 1.41
CHMP6-204ENST00000572778 SMARCC2Q8TAQ2 1214 aa23.83■■□□□ 1.41
CHMP6-204ENST00000572778 GPKOWQ92917 476 aaPredicted RBP eCLIP23.83■■□□□ 1.41
CHMP6-204ENST00000572778 PDCD2LQ9BRP1 358 aa23.83■■□□□ 1.41
CHMP6-204ENST00000572778 PDRG1Q9NUG6 133 aa23.83■■□□□ 1.41
CHMP6-204ENST00000572778 ZMYND8Q9ULU4 1186 aaPredicted RBP23.83■■□□□ 1.41
CHMP6-204ENST00000572778 ATP11BQ9Y2G3 1177 aa23.83■■□□□ 1.41
CHMP6-204ENST00000572778 Q9Y3F1 56 aa23.83■■□□□ 1.41
CHMP6-204ENST00000572778 BAZ2BQ9UIF8 2168 aaKnown RBP23.83■■□□□ 1.41
CHMP6-204ENST00000572778 CTAGE5O15320 804 aa23.82■■□□□ 1.4
CHMP6-204ENST00000572778 SEC24BO95487 1268 aa23.82■■□□□ 1.4
CHMP6-204ENST00000572778 TXNP10599 105 aaKnown RBP23.82■■□□□ 1.4
CHMP6-204ENST00000572778 TOB2Q14106 344 aaPredicted RBP23.82■■□□□ 1.4
CHMP6-204ENST00000572778 TTLL4Q14679 1199 aa23.82■■□□□ 1.4
CHMP6-204ENST00000572778 FSCN1Q16658 493 aaKnown RBP23.82■■□□□ 1.4
CHMP6-204ENST00000572778 USP17L6PQ6QN14 398 aa23.82■■□□□ 1.4
CHMP6-204ENST00000572778 VTI1AQ96AJ9 217 aa23.82■■□□□ 1.4
CHMP6-204ENST00000572778 PSTPIP2Q9H939 334 aa23.82■■□□□ 1.4
CHMP6-204ENST00000572778 STARD7Q9NQZ5 370 aa23.82■■□□□ 1.4
CHMP6-204ENST00000572778 MYH6P13533 1939 aa23.82■■□□□ 1.4
CHMP6-204ENST00000572778 EIF3JO75822 258 aaKnown RBP23.81■■□□□ 1.4
CHMP6-204ENST00000572778 SYN1P17600 705 aa23.81■■□□□ 1.4
CHMP6-204ENST00000572778 PDIA3P30101 505 aaKnown RBP23.81■■□□□ 1.4
CHMP6-204ENST00000572778 ANAPC15P60006 121 aa23.81■■□□□ 1.4
CHMP6-204ENST00000572778 PGM5Q15124 567 aa23.81■■□□□ 1.4
CHMP6-204ENST00000572778 GLT1D1Q96MS3 346 aa23.81■■□□□ 1.4
CHMP6-204ENST00000572778 LARP6Q9BRS8 491 aaKnown RBP23.81■■□□□ 1.4
CHMP6-204ENST00000572778 LRRC37A2A6NM11 1700 aa23.81■■□□□ 1.4
CHMP6-204ENST00000572778 NKRFO15226 690 aaKnown RBP eCLIP23.8■■□□□ 1.4
CHMP6-204ENST00000572778 NKX3-2P78367 333 aa23.8■■□□□ 1.4
CHMP6-204ENST00000572778 CCT2P78371 535 aaKnown RBP23.8■■□□□ 1.4
CHMP6-204ENST00000572778 WWC2Q6AWC2 1192 aa23.8■■□□□ 1.4
CHMP6-204ENST00000572778 OR6J1Q8NGC5 347 aa23.8■■□□□ 1.4
CHMP6-204ENST00000572778 COPS5Q92905 334 aa23.8■■□□□ 1.4
CHMP6-204ENST00000572778 MEIS2O14770 477 aa23.79■■□□□ 1.4
CHMP6-204ENST00000572778 ZEB2O60315 1214 aa23.79■■□□□ 1.4
CHMP6-204ENST00000572778 ARIH2O95376 493 aa23.79■■□□□ 1.4
CHMP6-204ENST00000572778 CCND2P30279 289 aa23.79■■□□□ 1.4
CHMP6-204ENST00000572778 NAPAP54920 295 aa23.79■■□□□ 1.4
CHMP6-204ENST00000572778 EVCP57679 992 aa23.79■■□□□ 1.4
CHMP6-204ENST00000572778 TRIM60Q495X7 471 aa23.79■■□□□ 1.4
CHMP6-204ENST00000572778 VSIG10LQ86VR7 867 aa23.79■■□□□ 1.4
CHMP6-204ENST00000572778 IL31RAQ8NI17 732 aa23.79■■□□□ 1.4
CHMP6-204ENST00000572778 ZFP91Q96JP5 570 aaPredicted RBP23.79■■□□□ 1.4
CHMP6-204ENST00000572778 PIK3CDO00329 1044 aa23.78■■□□□ 1.4
CHMP6-204ENST00000572778 SNX17Q15036 470 aa23.78■■□□□ 1.4
CHMP6-204ENST00000572778 LY6KQ17RY6 165 aa23.78■■□□□ 1.4
CHMP6-204ENST00000572778 CXCL17Q6UXB2 119 aa23.78■■□□□ 1.4
CHMP6-204ENST00000572778 NCOA5Q9HCD5 579 aaKnown RBP23.78■■□□□ 1.4
CHMP6-204ENST00000572778 MRVI1Q9Y6F6 885 aa23.78■■□□□ 1.4
CHMP6-204ENST00000572778 NID2Q14112 1375 aa23.78■■□□□ 1.4
CHMP6-204ENST00000572778 AKAP17AQ02040 695 aaKnown RBP23.77■■□□□ 1.4
CHMP6-204ENST00000572778 UBE2SQ16763 222 aa23.77■■□□□ 1.4
CHMP6-204ENST00000572778 C1orf53Q5VUE5 145 aa23.77■■□□□ 1.4
CHMP6-204ENST00000572778 CCDC62Q6P9F0 684 aa23.77■■□□□ 1.4
CHMP6-204ENST00000572778 ELP1O95163 1332 aa23.77■■□□□ 1.4
CHMP6-204ENST00000572778 hCG_1984214I3L0E3 225 aa23.76■■□□□ 1.39
CHMP6-204ENST00000572778 PPFIA3O75145 1194 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms