RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 ASB14A6NK59 587 aa18.23■□□□□ 0.51
CHD3-215ENST00000572750 SGPL1O95470 568 aa18.23■□□□□ 0.51
CHD3-215ENST00000572750 ZNF865P0CJ78 1059 aaPredicted RBP18.23■□□□□ 0.51
CHD3-215ENST00000572750 BMP8BP34820 402 aa18.23■□□□□ 0.51
CHD3-215ENST00000572750 GHRHRQ02643 423 aa18.23■□□□□ 0.51
CHD3-215ENST00000572750 ANKRD1Q15327 319 aa18.23■□□□□ 0.51
CHD3-215ENST00000572750 NTRK3Q16288 839 aa18.23■□□□□ 0.51
CHD3-215ENST00000572750 EEPD1Q7L9B9 569 aa18.23■□□□□ 0.51
CHD3-215ENST00000572750 FBXO16Q8IX29 292 aaPredicted RBP18.23■□□□□ 0.51
CHD3-215ENST00000572750 KATNBL1Q9H079 304 aa18.23■□□□□ 0.51
CHD3-215ENST00000572750 SEPT4O43236 478 aa18.22■□□□□ 0.51
CHD3-215ENST00000572750 LARGE1O95461 756 aa18.22■□□□□ 0.51
CHD3-215ENST00000572750 SCRN1Q12765 414 aa18.22■□□□□ 0.51
CHD3-215ENST00000572750 TYW1BQ6NUM6 668 aa18.22■□□□□ 0.51
CHD3-215ENST00000572750 DNERQ8NFT8 737 aa18.22■□□□□ 0.51
CHD3-215ENST00000572750 TAAR1Q96RJ0 339 aa18.22■□□□□ 0.51
CHD3-215ENST00000572750 SLC26A6Q9BXS9 759 aa18.22■□□□□ 0.51
CHD3-215ENST00000572750 CRISPLD2Q9H0B8 497 aa18.22■□□□□ 0.51
CHD3-215ENST00000572750 PRDM6Q9NQX0 595 aa18.22■□□□□ 0.51
CHD3-215ENST00000572750 NRBP1Q9UHY1 535 aa18.22■□□□□ 0.51
CHD3-215ENST00000572750 DNAH12Q6ZR08 3092 aa18.21■□□□□ 0.51
CHD3-215ENST00000572750 GCOM1H8Y6P7 765 aaPredicted RBP18.21■□□□□ 0.51
CHD3-215ENST00000572750 ADCY6O43306 1168 aa18.21■□□□□ 0.51
CHD3-215ENST00000572750 TFRCP02786 760 aaKnown RBP18.21■□□□□ 0.51
CHD3-215ENST00000572750 POLR2MP0CAP2 368 aa18.21■□□□□ 0.51
CHD3-215ENST00000572750 EIF2AK2P19525 551 aaKnown RBP18.21■□□□□ 0.51
CHD3-215ENST00000572750 NAPAP54920 295 aa18.21■□□□□ 0.51
CHD3-215ENST00000572750 ACVR2BQ13705 512 aa18.21■□□□□ 0.51
CHD3-215ENST00000572750 LHX8Q68G74 356 aa18.21■□□□□ 0.51
CHD3-215ENST00000572750 MORC4Q8TE76 937 aa18.21■□□□□ 0.51
CHD3-215ENST00000572750 TBC1D32Q96NH3 1257 aa18.21■□□□□ 0.51
CHD3-215ENST00000572750 RMDN3Q96TC7 470 aa18.21■□□□□ 0.51
CHD3-215ENST00000572750 BACH2Q9BYV9 841 aa18.21■□□□□ 0.51
CHD3-215ENST00000572750 MAF1Q9H063 256 aa18.21■□□□□ 0.51
CHD3-215ENST00000572750 SLKQ9H2G2 1235 aaPredicted RBP18.21■□□□□ 0.51
CHD3-215ENST00000572750 ABHD16BQ9H3Z7 469 aa18.21■□□□□ 0.51
CHD3-215ENST00000572750 KIAA1217Q5T5P2 1943 aa18.21■□□□□ 0.51
CHD3-215ENST00000572750 STXBP3O00186 592 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 CPLX1O14810 134 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 PFKFB2O60825 505 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 DTNBO60941 627 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 SCG2P13521 617 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 AKR1A1P14550 325 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 IFNAR1P17181 557 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 EDNRBP24530 442 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 PDE4DQ08499 809 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 ME3Q16798 604 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 PFKFB3Q16875 520 aaPredicted RBP18.2■□□□□ 0.5
CHD3-215ENST00000572750 LRIT3Q3SXY7 679 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 USP17L6PQ6QN14 398 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 FCHSD1Q86WN1 690 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 RNF26Q9BY78 433 aaPredicted RBP18.2■□□□□ 0.5
CHD3-215ENST00000572750 PXMP2Q9NR77 195 aa18.2■□□□□ 0.5
CHD3-215ENST00000572750 PRPF3O43395 683 aaKnown RBP18.19■□□□□ 0.5
CHD3-215ENST00000572750 MSCO60682 206 aa18.19■□□□□ 0.5
CHD3-215ENST00000572750 PKN1Q16512 942 aa18.19■□□□□ 0.5
CHD3-215ENST00000572750 UBE2SQ16763 222 aa18.19■□□□□ 0.5
CHD3-215ENST00000572750 CCDC144BQ3MJ40 725 aa18.19■□□□□ 0.5
CHD3-215ENST00000572750 ARHGEF16Q5VV41 709 aa18.19■□□□□ 0.5
CHD3-215ENST00000572750 PPP1R18Q6NYC8 613 aa18.19■□□□□ 0.5
CHD3-215ENST00000572750 NECAB1Q8N987 351 aa18.19■□□□□ 0.5
CHD3-215ENST00000572750 IL31RAQ8NI17 732 aa18.19■□□□□ 0.5
CHD3-215ENST00000572750 NSUN6Q8TEA1 469 aaKnown RBP18.19■□□□□ 0.5
CHD3-215ENST00000572750 MPHOSPH6Q99547 160 aaKnown RBP18.19■□□□□ 0.5
CHD3-215ENST00000572750 BARHL2Q9NY43 387 aa18.19■□□□□ 0.5
CHD3-215ENST00000572750 OGDHLQ9ULD0 1010 aa18.19■□□□□ 0.5
CHD3-215ENST00000572750 LOC102724159A0A0B4J2E5 919 aa18.18■□□□□ 0.5
CHD3-215ENST00000572750 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.18■□□□□ 0.5
CHD3-215ENST00000572750 hCG_1984214I3L0E3 225 aa18.18■□□□□ 0.5
CHD3-215ENST00000572750 MEIS2O14770 477 aa18.18■□□□□ 0.5
CHD3-215ENST00000572750 RARBP10826 455 aa18.18■□□□□ 0.5
CHD3-215ENST00000572750 PTGS1P23219 599 aa18.18■□□□□ 0.5
CHD3-215ENST00000572750 ADCYAP1R1P41586 468 aa18.18■□□□□ 0.5
CHD3-215ENST00000572750 AKAP17AQ02040 695 aaKnown RBP18.18■□□□□ 0.5
CHD3-215ENST00000572750 PWP2Q15269 919 aaKnown RBP18.18■□□□□ 0.5
CHD3-215ENST00000572750 ZNF713Q8N859 430 aaPredicted RBP18.18■□□□□ 0.5
CHD3-215ENST00000572750 SMARCC2Q8TAQ2 1214 aa18.18■□□□□ 0.5
CHD3-215ENST00000572750 DIS3LQ8TF46 1054 aaKnown RBP18.18■□□□□ 0.5
CHD3-215ENST00000572750 CUL5Q93034 780 aa18.18■□□□□ 0.5
CHD3-215ENST00000572750 GTF3C6Q969F1 213 aa18.18■□□□□ 0.5
CHD3-215ENST00000572750 PSTPIP2Q9H939 334 aa18.18■□□□□ 0.5
CHD3-215ENST00000572750 VTA1Q9NP79 307 aa18.18■□□□□ 0.5
CHD3-215ENST00000572750 PDGFCQ9NRA1 345 aa18.18■□□□□ 0.5
CHD3-215ENST00000572750 MAP3K20Q9NYL2 800 aaKnown RBP18.18■□□□□ 0.5
CHD3-215ENST00000572750 ZMYND8Q9ULU4 1186 aaPredicted RBP18.18■□□□□ 0.5
CHD3-215ENST00000572750 PIK3CDO00329 1044 aa18.17■□□□□ 0.5
CHD3-215ENST00000572750 MYCNP04198 464 aaPredicted RBP18.17■□□□□ 0.5
CHD3-215ENST00000572750 RABEP1Q15276 862 aa18.17■□□□□ 0.5
CHD3-215ENST00000572750 TAPT1Q6NXT6 567 aa18.17■□□□□ 0.5
CHD3-215ENST00000572750 CPLX2Q6PUV4 134 aaKnown RBP18.17■□□□□ 0.5
CHD3-215ENST00000572750 TRIM22Q8IYM9 498 aa18.17■□□□□ 0.5
CHD3-215ENST00000572750 SAMD3Q8N6K7 520 aa18.17■□□□□ 0.5
CHD3-215ENST00000572750 GUCD1Q96NT3 240 aa18.17■□□□□ 0.5
CHD3-215ENST00000572750 PDCD2LQ9BRP1 358 aa18.17■□□□□ 0.5
CHD3-215ENST00000572750 FAM184BQ9ULE4 1060 aa18.17■□□□□ 0.5
CHD3-215ENST00000572750 FRMPD4Q14CM0 1322 aa18.17■□□□□ 0.5
CHD3-215ENST00000572750 SYNRGQ9UMZ2 1314 aa18.17■□□□□ 0.5
CHD3-215ENST00000572750 ADCY7P51828 1080 aa18.16■□□□□ 0.5
CHD3-215ENST00000572750 SSRP1Q08945 709 aaKnown RBP18.16■□□□□ 0.5
CHD3-215ENST00000572750 ST3GAL1Q11201 340 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms