RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 TXNP10599 105 aaKnown RBP11.59□□□□□ -0.55
TRAPPC1-205ENST00000572656 PCP11498 1178 aaKnown RBP11.59□□□□□ -0.55
TRAPPC1-205ENST00000572656 MFSD6Q6ZSS7 791 aa11.59□□□□□ -0.55
TRAPPC1-205ENST00000572656 MICALL1Q8N3F8 863 aa11.59□□□□□ -0.55
TRAPPC1-205ENST00000572656 COPS5Q92905 334 aa11.59□□□□□ -0.55
TRAPPC1-205ENST00000572656 GTPBP6O43824 516 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC1-205ENST00000572656 BMP1P13497 986 aa11.58□□□□□ -0.56
TRAPPC1-205ENST00000572656 HAND2P61296 217 aa11.58□□□□□ -0.56
TRAPPC1-205ENST00000572656 BFSP2Q13515 415 aa11.58□□□□□ -0.56
TRAPPC1-205ENST00000572656 AAK1Q2M2I8 961 aa11.58□□□□□ -0.56
TRAPPC1-205ENST00000572656 GPATCH4Q5T3I0 446 aaKnown RBP11.58□□□□□ -0.56
TRAPPC1-205ENST00000572656 ZNF589Q86UQ0 364 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC1-205ENST00000572656 PPP1R13LQ8WUF5 828 aa11.58□□□□□ -0.56
TRAPPC1-205ENST00000572656 FTOQ9C0B1 505 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRAPPC1-205ENST00000572656 MAF1Q9H063 256 aa11.58□□□□□ -0.56
TRAPPC1-205ENST00000572656 NOD1Q9Y239 953 aa11.58□□□□□ -0.56
TRAPPC1-205ENST00000572656 MTCH2Q9Y6C9 303 aa11.58□□□□□ -0.56
TRAPPC1-205ENST00000572656 MCM3APO60318 1980 aa11.58□□□□□ -0.56
TRAPPC1-205ENST00000572656 CHD7Q9P2D1 2997 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 KIF28PB7ZC32 967 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 RFXAPO00287 272 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 BAIAP3O94812 1187 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 ARIH2O95376 493 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 TFF2Q03403 129 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 NMIQ13287 307 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 SKIV2LQ15477 1246 aaKnown RBP11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 USH1GQ495M9 461 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 CCDC62Q6P9F0 684 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 DGKHQ86XP1 1220 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 TBC1D10CQ8IV04 446 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 HERC6Q8IVU3 1022 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 CCDC155Q8N6L0 562 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 ESR2Q92731 530 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 RNF41Q9H4P4 317 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 CERS4Q9HA82 394 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 CCDC171Q6TFL3 1326 aa11.57□□□□□ -0.56
TRAPPC1-205ENST00000572656 EPOPA6NHQ4 379 aa11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 GOLGA8HP0CJ92 632 aa11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 NT5C2P49902 561 aa11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 MFAP1P55081 439 aaKnown RBP11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 CHMP4BP1P59074 171 aa11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 TAP1Q03518 808 aa11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 HDAC1Q13547 482 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 PTGISQ16647 500 aa11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 SESTD1Q86VW0 696 aa11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 CAGE1Q8TC20 777 aa11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 NSUN6Q8TEA1 469 aaKnown RBP11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 AFAP1L1Q8TED9 768 aa11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 AFG1LQ8WV93 481 aa11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 ARNTL2Q8WYA1 636 aa11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 UBA5Q9GZZ9 404 aa11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 ABCB11O95342 1321 aa11.56□□□□□ -0.56
TRAPPC1-205ENST00000572656 TRIM6-TRIM34B2RNG4 842 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 ARHGEF15O94989 841 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 GH1P01241 217 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 MMP3P08254 477 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 KCNJ6P48051 423 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 KCNQ1P51787 676 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 RRP1P56182 461 aaKnown RBP11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 ARHGAP1Q07960 439 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 STXBP2Q15833 593 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 CDC37Q16543 378 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 LY6KQ17RY6 165 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 CCDC178Q5BJE1 867 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 SEPT14Q6ZU15 432 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 MCF2L2Q86YR7 1114 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 SYTL5Q8TDW5 730 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 TBC1D5Q92609 795 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 NECAB3Q96P71 396 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 TAAR1Q96RJ0 339 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 CTAGE1Q96RT6 745 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 IWS1Q96ST2 819 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 ZKSCAN3Q9BRR0 538 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 CPVLQ9H3G5 476 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 COG5Q9UP83 839 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 NEDD4P46934 1319 aa11.55□□□□□ -0.56
TRAPPC1-205ENST00000572656 ZNF213O14771 459 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 TLL1O43897 1013 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 PARNO95453 639 aaKnown RBP11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 SELPP16109 830 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 SDSP20132 328 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 CASTP20810 708 aaKnown RBP11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 GPNMBQ14956 572 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 KRT40Q6A162 431 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 GDF6Q6KF10 455 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 IQCA1Q86XH1 822 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 ADGRF4Q8IZF3 695 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 PNMA1Q8ND90 353 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 ANKS1AQ92625 1134 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 KAT2BQ92831 832 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 RILPL2Q969X0 211 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 RMDN3Q96TC7 470 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 C1QTNF1Q9BXJ1 281 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 KAT14Q9H8E8 782 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 COL20A1Q9P218 1284 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 RAPGEFL1Q9UHV5 662 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 LCTP09848 1927 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 BDP1A6H8Y1 2624 aa11.54□□□□□ -0.56
TRAPPC1-205ENST00000572656 XIRP2A4UGR9 3374 aa11.53□□□□□ -0.56
TRAPPC1-205ENST00000572656 KDM4AO75164 1064 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms