RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 WDR11Q9BZH6 1224 aa12.07□□□□□ -0.48
CHMP6-203ENST00000572525 EXOC6BQ9Y2D4 811 aa12.07□□□□□ -0.48
CHMP6-203ENST00000572525 NCK2O43639 380 aa12.06□□□□□ -0.48
CHMP6-203ENST00000572525 ATP5JP18859 108 aa12.06□□□□□ -0.48
CHMP6-203ENST00000572525 PTPN5P54829 565 aa12.06□□□□□ -0.48
CHMP6-203ENST00000572525 GPNMBQ14956 572 aa12.06□□□□□ -0.48
CHMP6-203ENST00000572525 PTPROQ16827 1216 aa12.06□□□□□ -0.48
CHMP6-203ENST00000572525 HERC4Q5GLZ8 1057 aaPredicted RBP12.06□□□□□ -0.48
CHMP6-203ENST00000572525 HFE2Q6ZVN8 426 aa12.06□□□□□ -0.48
CHMP6-203ENST00000572525 LRRC47Q8N1G4 583 aaKnown RBP12.06□□□□□ -0.48
CHMP6-203ENST00000572525 SP7Q8TDD2 431 aaPredicted RBP12.06□□□□□ -0.48
CHMP6-203ENST00000572525 CEP95Q96GE4 821 aa12.06□□□□□ -0.48
CHMP6-203ENST00000572525 HAUS7Q99871 368 aa12.06□□□□□ -0.48
CHMP6-203ENST00000572525 C1orf115Q9H7X2 142 aa12.06□□□□□ -0.48
CHMP6-203ENST00000572525 NOD1Q9Y239 953 aa12.06□□□□□ -0.48
CHMP6-203ENST00000572525 INSL6Q9Y581 213 aa12.06□□□□□ -0.48
CHMP6-203ENST00000572525 SUPT16HQ9Y5B9 1047 aaKnown RBP12.06□□□□□ -0.48
CHMP6-203ENST00000572525 PLXNA3P51805 1871 aa12.06□□□□□ -0.48
CHMP6-203ENST00000572525 KAT6AQ92794 2004 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 TMEM232C9JQI7 657 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 MYL3P08590 195 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 ALAS1P13196 640 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 SELPP16109 830 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 PTGS1P23219 599 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 ALDH5A1P51649 535 aaPredicted RBP12.05□□□□□ -0.48
CHMP6-203ENST00000572525 FAM47CQ5HY64 1035 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 TMEM63BQ5T3F8 832 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 SLFN13Q68D06 897 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 LRRC8DQ7L1W4 858 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 FBXO22Q8NEZ5 403 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 OR6J1Q8NGC5 347 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 NEDD1Q8NHV4 660 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 SCFD2Q8WU76 684 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 IL1RAPL2Q9NP60 686 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 PNMA2Q9UL42 364 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 DCHS1Q96JQ0 3298 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 ZNF292O60281 2723 aa12.05□□□□□ -0.48
CHMP6-203ENST00000572525 IFIT2P09913 472 aaKnown RBP12.04□□□□□ -0.48
CHMP6-203ENST00000572525 EDNRBP24530 442 aa12.04□□□□□ -0.48
CHMP6-203ENST00000572525 DEFB103AP81534 67 aa12.04□□□□□ -0.48
CHMP6-203ENST00000572525 HTRA4P83105 476 aaPredicted RBP12.04□□□□□ -0.48
CHMP6-203ENST00000572525 IKBKEQ14164 716 aa12.04□□□□□ -0.48
CHMP6-203ENST00000572525 PPP2R5BQ15173 497 aa12.04□□□□□ -0.48
CHMP6-203ENST00000572525 PTGISQ16647 500 aa12.04□□□□□ -0.48
CHMP6-203ENST00000572525 MUM1L1Q5H9M0 696 aa12.04□□□□□ -0.48
CHMP6-203ENST00000572525 EEPD1Q7L9B9 569 aa12.04□□□□□ -0.48
CHMP6-203ENST00000572525 ZNF444Q8N0Y2 327 aaPredicted RBP12.04□□□□□ -0.48
CHMP6-203ENST00000572525 CTAGE1Q96RT6 745 aa12.04□□□□□ -0.48
CHMP6-203ENST00000572525 STRBPQ96SI9 672 aaKnown RBP12.04□□□□□ -0.48
CHMP6-203ENST00000572525 MPHOSPH6Q99547 160 aaKnown RBP12.04□□□□□ -0.48
CHMP6-203ENST00000572525 PUS7LQ9H0K6 701 aaKnown RBP12.04□□□□□ -0.48
CHMP6-203ENST00000572525 GSG1L2A8MUP6 293 aa12.03□□□□□ -0.48
CHMP6-203ENST00000572525 ICAM1P05362 532 aa12.03□□□□□ -0.48
CHMP6-203ENST00000572525 GNAT2P19087 354 aa12.03□□□□□ -0.48
CHMP6-203ENST00000572525 IRS1P35568 1242 aa12.03□□□□□ -0.48
CHMP6-203ENST00000572525 SLC1A4P43007 532 aa12.03□□□□□ -0.48
CHMP6-203ENST00000572525 MKRN4PQ13434 485 aaPredicted RBP12.03□□□□□ -0.48
CHMP6-203ENST00000572525 DNERQ8NFT8 737 aa12.03□□□□□ -0.48
CHMP6-203ENST00000572525 MAF1Q9H063 256 aa12.03□□□□□ -0.48
CHMP6-203ENST00000572525 IRF2BPLQ9H1B7 796 aa12.03□□□□□ -0.48
CHMP6-203ENST00000572525 GVINP1Q7Z2Y8 2422 aa12.03□□□□□ -0.48
CHMP6-203ENST00000572525 B4DLN1 442 aa12.02□□□□□ -0.49
CHMP6-203ENST00000572525 H3BNC9 293 aa12.02□□□□□ -0.49
CHMP6-203ENST00000572525 NBNO60934 754 aa12.02□□□□□ -0.49
CHMP6-203ENST00000572525 MRPL12P52815 198 aaKnown RBP12.02□□□□□ -0.49
CHMP6-203ENST00000572525 SMAD2Q15796 467 aaKnown RBP12.02□□□□□ -0.49
CHMP6-203ENST00000572525 SLFNL1Q499Z3 407 aa12.02□□□□□ -0.49
CHMP6-203ENST00000572525 RCSD1Q6JBY9 416 aa12.02□□□□□ -0.49
CHMP6-203ENST00000572525 NSMFQ6X4W1 530 aa12.02□□□□□ -0.49
CHMP6-203ENST00000572525 FTSJ3Q8IY81 847 aaKnown RBP12.02□□□□□ -0.49
CHMP6-203ENST00000572525 BANK1Q8NDB2 785 aa12.02□□□□□ -0.49
CHMP6-203ENST00000572525 NSUN3Q9H649 340 aaKnown RBP12.02□□□□□ -0.49
CHMP6-203ENST00000572525 MTUS1Q9ULD2 1270 aa12.02□□□□□ -0.49
CHMP6-203ENST00000572525 CCPG1Q9ULG6 757 aa12.02□□□□□ -0.49
CHMP6-203ENST00000572525 PRR12Q9ULL5 1215 aa12.02□□□□□ -0.49
CHMP6-203ENST00000572525 DDX49Q9Y6V7 483 aaKnown RBP12.02□□□□□ -0.49
CHMP6-203ENST00000572525 EMSYQ7Z589 1322 aa12.02□□□□□ -0.49
CHMP6-203ENST00000572525 MYO15AQ9UKN7 3530 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 H3BQ06 376 aaPredicted RBP12.01□□□□□ -0.49
CHMP6-203ENST00000572525 CCER2I3L3R5 266 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 RAB11FIP3O75154 756 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 CKBP12277 381 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 IKQ13123 557 aaPredicted RBP12.01□□□□□ -0.49
CHMP6-203ENST00000572525 BAATQ14032 418 aaPredicted RBP12.01□□□□□ -0.49
CHMP6-203ENST00000572525 CTC1Q2NKJ3 1217 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 GDF6Q6KF10 455 aaPredicted RBP12.01□□□□□ -0.49
CHMP6-203ENST00000572525 BTNL9Q6UXG8 535 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 ITPRIPQ8IWB1 547 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 PRSS33Q8NF86 280 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 DHX38Q92620 1227 aaKnown RBP12.01□□□□□ -0.49
CHMP6-203ENST00000572525 EDAQ92838 391 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 CRBNQ96SW2 442 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 C17orf80Q9BSJ5 609 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 LMAN2LQ9H0V9 348 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 RANBP17Q9H2T7 1088 aaKnown RBP12.01□□□□□ -0.49
CHMP6-203ENST00000572525 BOLA2Q9H3K6 86 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 GTF2IRD1Q9UHL9 959 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 TTC3P53804 2025 aa12.01□□□□□ -0.49
CHMP6-203ENST00000572525 MINDY4BA8MYZ0 360 aa12□□□□□ -0.49
CHMP6-203ENST00000572525 TSPY3P0CV98 308 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms