RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 XPNPEP3Q9NQH7 507 aa18.63■□□□□ 0.57
LITAF-210ENST00000571976 PXMP2Q9NR77 195 aa18.63■□□□□ 0.57
LITAF-210ENST00000571976 TPCN1Q9ULQ1 816 aa18.63■□□□□ 0.57
LITAF-210ENST00000571976 DDX49Q9Y6V7 483 aaKnown RBP18.63■□□□□ 0.57
LITAF-210ENST00000571976 DUSP11O75319 330 aaKnown RBP18.62■□□□□ 0.57
LITAF-210ENST00000571976 SCG2P13521 617 aa18.62■□□□□ 0.57
LITAF-210ENST00000571976 EIF2AK2P19525 551 aaKnown RBP18.62■□□□□ 0.57
LITAF-210ENST00000571976 NAPAP54920 295 aa18.62■□□□□ 0.57
LITAF-210ENST00000571976 IQSEC1Q6DN90 963 aa18.62■□□□□ 0.57
LITAF-210ENST00000571976 TAPT1Q6NXT6 567 aa18.62■□□□□ 0.57
LITAF-210ENST00000571976 PPP1R18Q6NYC8 613 aa18.62■□□□□ 0.57
LITAF-210ENST00000571976 FCHSD1Q86WN1 690 aa18.62■□□□□ 0.57
LITAF-210ENST00000571976 TEX2Q8IWB9 1127 aa18.62■□□□□ 0.57
LITAF-210ENST00000571976 FBXO16Q8IX29 292 aaPredicted RBP18.62■□□□□ 0.57
LITAF-210ENST00000571976 SMARCC2Q8TAQ2 1214 aa18.62■□□□□ 0.57
LITAF-210ENST00000571976 PHKBQ93100 1093 aa18.62■□□□□ 0.57
LITAF-210ENST00000571976 KIF2CQ99661 725 aa18.62■□□□□ 0.57
LITAF-210ENST00000571976 BARHL2Q9NY43 387 aa18.62■□□□□ 0.57
LITAF-210ENST00000571976 STXBP3O00186 592 aa18.61■□□□□ 0.57
LITAF-210ENST00000571976 MEIS2O14770 477 aa18.61■□□□□ 0.57
LITAF-210ENST00000571976 PFKFB2O60825 505 aa18.61■□□□□ 0.57
LITAF-210ENST00000571976 NR3C2P08235 984 aa18.61■□□□□ 0.57
LITAF-210ENST00000571976 ADCYAP1R1P41586 468 aa18.61■□□□□ 0.57
LITAF-210ENST00000571976 TNFAIP2Q03169 654 aa18.61■□□□□ 0.57
LITAF-210ENST00000571976 STXBP2Q15833 593 aa18.61■□□□□ 0.57
LITAF-210ENST00000571976 USP17L6PQ6QN14 398 aa18.61■□□□□ 0.57
LITAF-210ENST00000571976 NECAB2Q7Z6G3 386 aa18.61■□□□□ 0.57
LITAF-210ENST00000571976 TRIM22Q8IYM9 498 aa18.61■□□□□ 0.57
LITAF-210ENST00000571976 PAWRQ96IZ0 340 aaKnown RBP18.61■□□□□ 0.57
LITAF-210ENST00000571976 SLC26A6Q9BXS9 759 aa18.61■□□□□ 0.57
LITAF-210ENST00000571976 PDGFCQ9NRA1 345 aa18.61■□□□□ 0.57
LITAF-210ENST00000571976 RBM47A0AV96 593 aaKnown RBP18.6■□□□□ 0.57
LITAF-210ENST00000571976 DNM1LO00429 736 aa18.6■□□□□ 0.57
LITAF-210ENST00000571976 MNX1P50219 401 aaPredicted RBP18.6■□□□□ 0.57
LITAF-210ENST00000571976 SSRP1Q08945 709 aaKnown RBP18.6■□□□□ 0.57
LITAF-210ENST00000571976 SCRN1Q12765 414 aa18.6■□□□□ 0.57
LITAF-210ENST00000571976 PKN1Q16512 942 aa18.6■□□□□ 0.57
LITAF-210ENST00000571976 RNF180Q86T96 592 aa18.6■□□□□ 0.57
LITAF-210ENST00000571976 PDCD2LQ9BRP1 358 aa18.6■□□□□ 0.57
LITAF-210ENST00000571976 FRMPD3Q5JV73 1810 aa18.6■□□□□ 0.57
LITAF-210ENST00000571976 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.59■□□□□ 0.57
LITAF-210ENST00000571976 EIF3JO75822 258 aaKnown RBP18.59■□□□□ 0.57
LITAF-210ENST00000571976 CDKL5O76039 1030 aa18.59■□□□□ 0.57
LITAF-210ENST00000571976 TYW1BQ6NUM6 668 aa18.59■□□□□ 0.57
LITAF-210ENST00000571976 NOL8Q76FK4 1167 aaKnown RBP18.59■□□□□ 0.57
LITAF-210ENST00000571976 IL27Q8NEV9 243 aa18.59■□□□□ 0.57
LITAF-210ENST00000571976 CCDC12Q8WUD4 166 aaPredicted RBP18.59■□□□□ 0.57
LITAF-210ENST00000571976 LENG1Q96BZ8 264 aaPredicted RBP18.59■□□□□ 0.57
LITAF-210ENST00000571976 BACH2Q9BYV9 841 aa18.59■□□□□ 0.57
LITAF-210ENST00000571976 WDR11Q9BZH6 1224 aa18.59■□□□□ 0.57
LITAF-210ENST00000571976 GLT8D2Q9H1C3 349 aa18.59■□□□□ 0.57
LITAF-210ENST00000571976 C11orf49Q9H6J7 331 aa18.59■□□□□ 0.57
LITAF-210ENST00000571976 SPC25Q9HBM1 224 aa18.59■□□□□ 0.57
LITAF-210ENST00000571976 RIC8AQ9NPQ8 531 aa18.59■□□□□ 0.57
LITAF-210ENST00000571976 LRRC37A2A6NM11 1700 aa18.59■□□□□ 0.57
LITAF-210ENST00000571976 MKI67P46013 3256 aaKnown RBP18.59■□□□□ 0.57
LITAF-210ENST00000571976 SMCO2A6NFE2 343 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 KBTBD13C9JR72 458 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 ADCY6O43306 1168 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 PPFIA3O75145 1194 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 ADAMTS4O75173 837 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 PGK1P00558 417 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 MYCNP04198 464 aaPredicted RBP18.58■□□□□ 0.56
LITAF-210ENST00000571976 SMPD1P17405 629 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 PGM5Q15124 567 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 RABEP1Q15276 862 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 LRRC41Q15345 812 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 ME3Q16798 604 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 GJC2Q5T442 439 aaPredicted RBP18.58■□□□□ 0.56
LITAF-210ENST00000571976 VSIG10LQ86VR7 867 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 DIS3LQ8TF46 1054 aaKnown RBP18.58■□□□□ 0.56
LITAF-210ENST00000571976 SCFD2Q8WU76 684 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 GNEQ9Y223 722 aaKnown RBP18.58■□□□□ 0.56
LITAF-210ENST00000571976 Q9Y3F1 56 aa18.58■□□□□ 0.56
LITAF-210ENST00000571976 FRMPD4Q14CM0 1322 aa18.57■□□□□ 0.56
LITAF-210ENST00000571976 SYNRGQ9UMZ2 1314 aa18.57■□□□□ 0.56
LITAF-210ENST00000571976 COL6A1P12109 1028 aa18.57■□□□□ 0.56
LITAF-210ENST00000571976 MYCLP12524 364 aaPredicted RBP18.57■□□□□ 0.56
LITAF-210ENST00000571976 CCND2P30279 289 aa18.57■□□□□ 0.56
LITAF-210ENST00000571976 ADCY7P51828 1080 aa18.57■□□□□ 0.56
LITAF-210ENST00000571976 GJA9P57773 515 aa18.57■□□□□ 0.56
LITAF-210ENST00000571976 DUSP28Q4G0W2 176 aa18.57■□□□□ 0.56
LITAF-210ENST00000571976 TBC1D32Q96NH3 1257 aa18.57■□□□□ 0.56
LITAF-210ENST00000571976 HTATIP2Q9BUP3 242 aa18.57■□□□□ 0.56
LITAF-210ENST00000571976 AP5M1Q9H0R1 490 aa18.57■□□□□ 0.56
LITAF-210ENST00000571976 UPF3AQ9H1J1 476 aaKnown RBP18.57■□□□□ 0.56
LITAF-210ENST00000571976 LIMCH1Q9UPQ0 1083 aa18.57■□□□□ 0.56
LITAF-210ENST00000571976 ESYT2A0FGR8 921 aa18.56■□□□□ 0.56
LITAF-210ENST00000571976 SPDYE3A6NKU9 549 aa18.56■□□□□ 0.56
LITAF-210ENST00000571976 NKRFO15226 690 aaKnown RBP eCLIP18.56■□□□□ 0.56
LITAF-210ENST00000571976 DEXIO95424 95 aa18.56■□□□□ 0.56
LITAF-210ENST00000571976 FOSP01100 380 aaPredicted RBP18.56■□□□□ 0.56
LITAF-210ENST00000571976 TXNP10599 105 aaKnown RBP18.56■□□□□ 0.56
LITAF-210ENST00000571976 NKX3-2P78367 333 aa18.56■□□□□ 0.56
LITAF-210ENST00000571976 TTLL4Q14679 1199 aa18.56■□□□□ 0.56
LITAF-210ENST00000571976 UBE2SQ16763 222 aa18.56■□□□□ 0.56
LITAF-210ENST00000571976 XRRA1Q6P2D8 792 aa18.56■□□□□ 0.56
LITAF-210ENST00000571976 TLK2Q86UE8 772 aa18.56■□□□□ 0.56
LITAF-210ENST00000571976 KLHDC9Q8NEP7 349 aa18.56■□□□□ 0.56
LITAF-210ENST00000571976 ZMYND12Q9H0C1 365 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms