RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 HTRA4P83105 476 aaPredicted RBP8.49□□□□□ -1.05
CHD3-213ENST00000571249 RBM10P98175 930 aaKnown RBP8.49□□□□□ -1.05
CHD3-213ENST00000571249 ZNF200P98182 395 aaPredicted RBP8.49□□□□□ -1.05
CHD3-213ENST00000571249 RING1Q06587 406 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 CAMK2BQ13554 666 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 FAM47CQ5HY64 1035 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 SLC4A10Q6U841 1118 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 TBC1D9Q6ZT07 1266 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 ARMCX2Q7L311 632 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 SPICE1Q8N0Z3 855 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 NSUN4Q96CB9 384 aaKnown RBP8.49□□□□□ -1.05
CHD3-213ENST00000571249 RTKNQ9BST9 563 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 SEZ6LQ9BYH1 1024 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 SRCIN1Q9C0H9 1055 aa8.49□□□□□ -1.05
CHD3-213ENST00000571249 TRIP12Q14669 1992 aaPredicted RBP8.49□□□□□ -1.05
CHD3-213ENST00000571249 DNAJC25-GNG10A0A024R161 153 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 E9PSI1 815 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 GLP2RO95838 553 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 HLA-DOAP06340 250 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 CAMK1Q14012 370 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 SEPT2Q15019 361 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 TATDN1Q6P1N9 297 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 CNKSR3Q6P9H4 555 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 ATG9AQ7Z3C6 839 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 ADGRD2Q7Z7M1 963 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 CCDC144CPQ8IYA2 1237 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 MYOCDQ8IZQ8 938 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 EFCAB3Q8N7B9 438 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 ZNF579Q8NAF0 562 aaKnown RBP8.48□□□□□ -1.05
CHD3-213ENST00000571249 DDX11Q96FC9 970 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 AP5M1Q9H0R1 490 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 PDGFCQ9NRA1 345 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 FBXO28Q9NVF7 368 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 RAI14Q9P0K7 980 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 LHX6Q9UPM6 363 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 FLT1P17948 1338 aa8.48□□□□□ -1.05
CHD3-213ENST00000571249 TEP1Q99973 2627 aaKnown RBP8.48□□□□□ -1.05
CHD3-213ENST00000571249 COL11A1P12107 1806 aaPredicted RBP8.47□□□□□ -1.05
CHD3-213ENST00000571249 ABHD14A-ACY1A0A1B0GW23 586 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 C1QTNF9BB2RNN3 333 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 ZEB2O60315 1214 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 LGR5O75473 907 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 C1QTNF9P0C862 333 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 AOC1P19801 751 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 MTMR3Q13615 1198 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 ABCB5Q2M3G0 1257 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 CERKLQ49MI3 558 aaPredicted RBP8.47□□□□□ -1.05
CHD3-213ENST00000571249 ATF7IPQ6VMQ6 1270 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 RBM23Q86U06 439 aaKnown RBP8.47□□□□□ -1.05
CHD3-213ENST00000571249 UBALD2Q8IYN6 164 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 SUSD6Q92537 303 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 SAMD11Q96NU1 681 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 NOL10Q9BSC4 688 aaKnown RBP8.47□□□□□ -1.05
CHD3-213ENST00000571249 TRAIPQ9BWF2 469 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 AATFQ9NY61 560 aaKnown RBP eCLIP8.47□□□□□ -1.05
CHD3-213ENST00000571249 CEP126Q9P2H0 1117 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 ADAMTS5Q9UNA0 930 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 SORCS3Q9UPU3 1222 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 RIPK3Q9Y572 518 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 PTPN13Q12923 2485 aa8.47□□□□□ -1.05
CHD3-213ENST00000571249 PDS5AQ29RF7 1337 aaKnown RBP8.47□□□□□ -1.05
CHD3-213ENST00000571249 DMXL2Q8TDJ6 3036 aa8.46□□□□□ -1.05
CHD3-213ENST00000571249 PRR5-ARHGAP8B1AHC4 643 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 CXCL10P02778 98 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 ASGR2P07307 311 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 TGM1P22735 817 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 PMLP29590 882 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 RFX5P48382 616 aaPredicted RBP8.46□□□□□ -1.06
CHD3-213ENST00000571249 SLC4A3P48751 1232 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 ARHGAP8P85298 464 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 BFSP2Q13515 415 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 IKBKEQ14164 716 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 EFHBQ8N7U6 833 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 CTAGE1Q96RT6 745 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 GOPCQ9HD26 462 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 CABP5Q9NP86 173 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 CDH22Q9UJ99 828 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 ZNF214Q9UL59 606 aaPredicted RBP8.46□□□□□ -1.06
CHD3-213ENST00000571249 TENM4Q6N022 2769 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 CACNA1IQ9P0X4 2223 aa8.46□□□□□ -1.06
CHD3-213ENST00000571249 TANC1Q9C0D5 1861 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 TAF4O00268 1085 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 VWA5AO00534 786 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 UPP2O95045 317 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 BAG3O95817 575 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 MYL3P08590 195 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 ATF7P17544 494 aaPredicted RBP8.45□□□□□ -1.06
CHD3-213ENST00000571249 DNAJB1P25685 340 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 MCAMP43121 646 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 PURAQ00577 322 aaKnown RBP8.45□□□□□ -1.06
CHD3-213ENST00000571249 CCDC27Q2M243 656 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 SOWAHCQ53LP3 525 aaPredicted RBP8.45□□□□□ -1.06
CHD3-213ENST00000571249 VARS2Q5ST30 1063 aaKnown RBP8.45□□□□□ -1.06
CHD3-213ENST00000571249 PI16Q6UXB8 463 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 REPS2Q8NFH8 660 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 DHX38Q92620 1227 aaKnown RBP8.45□□□□□ -1.06
CHD3-213ENST00000571249 YME1L1Q96TA2 773 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 APOL5Q9BWW9 433 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 NCDNQ9UBB6 729 aa8.45□□□□□ -1.06
CHD3-213ENST00000571249 AKAP13Q12802 2813 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms