RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 RAB11FIP4Q86YS3 637 aa14.67□□□□□ -0.06
TVP23B-204ENST00000571018 C7orf61Q8IZ16 206 aa14.67□□□□□ -0.06
TVP23B-204ENST00000571018 NSUN6Q8TEA1 469 aaKnown RBP14.67□□□□□ -0.06
TVP23B-204ENST00000571018 SPC25Q9HBM1 224 aa14.67□□□□□ -0.06
TVP23B-204ENST00000571018 Q9Y3F1 56 aa14.67□□□□□ -0.06
TVP23B-204ENST00000571018 LRRC37A2A6NM11 1700 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 MYADML2A6NDP7 307 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 MOXD2PA6NHM9 499 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 CTAGE5O15320 804 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 ZBTB43O43298 467 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 C6orf222P0C671 652 aaPredicted RBP14.66□□□□□ -0.06
TVP23B-204ENST00000571018 CPA1P15085 419 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 SMPD1P17405 629 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 PSMA5P28066 241 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 ATN1P54259 1190 aaPredicted RBP14.66□□□□□ -0.06
TVP23B-204ENST00000571018 IRX5P78411 483 aaPredicted RBP14.66□□□□□ -0.06
TVP23B-204ENST00000571018 SNX17Q15036 470 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 C1orf53Q5VUE5 145 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 TMTC3Q6ZXV5 915 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 NOL8Q76FK4 1167 aaKnown RBP14.66□□□□□ -0.06
TVP23B-204ENST00000571018 CMTR1Q8N1G2 835 aaKnown RBP14.66□□□□□ -0.06
TVP23B-204ENST00000571018 FBXL16Q8N461 479 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 PIBF1Q8WXW3 757 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 FERMT2Q96AC1 680 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 IWS1Q96ST2 819 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 RMDN3Q96TC7 470 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 MYH6P13533 1939 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 ALPK3Q96L96 1907 aa14.66□□□□□ -0.06
TVP23B-204ENST00000571018 KLF18A0A0U1RQI7 1052 aa14.65□□□□□ -0.06
TVP23B-204ENST00000571018 RPS6KB1P23443 525 aa14.65□□□□□ -0.06
TVP23B-204ENST00000571018 ACLYP53396 1101 aa14.65□□□□□ -0.06
TVP23B-204ENST00000571018 RCAN1P53805 252 aa14.65□□□□□ -0.06
TVP23B-204ENST00000571018 FGD1P98174 961 aa14.65□□□□□ -0.06
TVP23B-204ENST00000571018 KCNA10Q16322 511 aa14.65□□□□□ -0.06
TVP23B-204ENST00000571018 DUSP28Q4G0W2 176 aa14.65□□□□□ -0.06
TVP23B-204ENST00000571018 TMEM63BQ5T3F8 832 aa14.65□□□□□ -0.06
TVP23B-204ENST00000571018 Q6ZUG5 572 aa14.65□□□□□ -0.06
TVP23B-204ENST00000571018 TLK2Q86UE8 772 aa14.65□□□□□ -0.06
TVP23B-204ENST00000571018 PCSK9Q8NBP7 692 aaKnown RBP14.65□□□□□ -0.06
TVP23B-204ENST00000571018 AGXT2Q9BYV1 514 aa14.65□□□□□ -0.06
TVP23B-204ENST00000571018 WDR11Q9BZH6 1224 aa14.65□□□□□ -0.06
TVP23B-204ENST00000571018 RBM28Q9NW13 759 aaKnown RBP14.65□□□□□ -0.06
TVP23B-204ENST00000571018 SEC63Q9UGP8 760 aaKnown RBP14.65□□□□□ -0.06
TVP23B-204ENST00000571018 A0A1W2PQ45 241 aaPredicted RBP14.64□□□□□ -0.07
TVP23B-204ENST00000571018 A0A1W2PQY0 241 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 GCOM1H8Y6P7 765 aaPredicted RBP14.64□□□□□ -0.07
TVP23B-204ENST00000571018 DYNC1LI2O43237 492 aaPredicted RBP14.64□□□□□ -0.07
TVP23B-204ENST00000571018 ASGR1P07306 291 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 POLR2MP0CAP2 368 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 CASTP20810 708 aaKnown RBP14.64□□□□□ -0.07
TVP23B-204ENST00000571018 HOXA13P31271 388 aaPredicted RBP14.64□□□□□ -0.07
TVP23B-204ENST00000571018 RTP1P59025 263 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 PPP2R5BQ15173 497 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 STXBP2Q15833 593 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 RTN1Q16799 776 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 GNASQ5JWF2 1037 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 ARHGEF16Q5VV41 709 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 CCDC82Q8N4S0 544 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 SCFD2Q8WU76 684 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 AP5M1Q9H0R1 490 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 ZSWIM6Q9HCJ5 1215 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 PXMP2Q9NR77 195 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 PCDH10Q9P2E7 1040 aa14.64□□□□□ -0.07
TVP23B-204ENST00000571018 GOLGA8AA7E2F4 631 aa14.63□□□□□ -0.07
TVP23B-204ENST00000571018 GOLGA8BA8MQT2 603 aa14.63□□□□□ -0.07
TVP23B-204ENST00000571018 NR3C2P08235 984 aa14.63□□□□□ -0.07
TVP23B-204ENST00000571018 EIF2AK2P19525 551 aaKnown RBP14.63□□□□□ -0.07
TVP23B-204ENST00000571018 FUT2Q10981 343 aa14.63□□□□□ -0.07
TVP23B-204ENST00000571018 RUFY3Q7L099 469 aa14.63□□□□□ -0.07
TVP23B-204ENST00000571018 BRF1Q92994 677 aa14.63□□□□□ -0.07
TVP23B-204ENST00000571018 PDCD2LQ9BRP1 358 aa14.63□□□□□ -0.07
TVP23B-204ENST00000571018 TM6SF1Q9BZW5 370 aa14.63□□□□□ -0.07
TVP23B-204ENST00000571018 STARD7Q9NQZ5 370 aa14.63□□□□□ -0.07
TVP23B-204ENST00000571018 FAM217BQ9NTX9 383 aaPredicted RBP14.63□□□□□ -0.07
TVP23B-204ENST00000571018 ZMYND8Q9ULU4 1186 aaPredicted RBP14.63□□□□□ -0.07
TVP23B-204ENST00000571018 ELP1O95163 1332 aa14.63□□□□□ -0.07
TVP23B-204ENST00000571018 NKRFO15226 690 aaKnown RBP eCLIP14.62□□□□□ -0.07
TVP23B-204ENST00000571018 EIF3JO75822 258 aaKnown RBP14.62□□□□□ -0.07
TVP23B-204ENST00000571018 SYN1P17600 705 aa14.62□□□□□ -0.07
TVP23B-204ENST00000571018 PTGS1P23219 599 aa14.62□□□□□ -0.07
TVP23B-204ENST00000571018 CDC27P30260 824 aa14.62□□□□□ -0.07
TVP23B-204ENST00000571018 BEX3Q00994 111 aa14.62□□□□□ -0.07
TVP23B-204ENST00000571018 APOBRQ0VD83 1088 aa14.62□□□□□ -0.07
TVP23B-204ENST00000571018 FSCN1Q16658 493 aaKnown RBP14.62□□□□□ -0.07
TVP23B-204ENST00000571018 TRIM60Q495X7 471 aa14.62□□□□□ -0.07
TVP23B-204ENST00000571018 GLT1D1Q96MS3 346 aa14.62□□□□□ -0.07
TVP23B-204ENST00000571018 BAZ2BQ9UIF8 2168 aaKnown RBP14.62□□□□□ -0.07
TVP23B-204ENST00000571018 COLQQ9Y215 455 aaPredicted RBP14.62□□□□□ -0.07
TVP23B-204ENST00000571018 ATP11BQ9Y2G3 1177 aa14.62□□□□□ -0.07
TVP23B-204ENST00000571018 CNTNAP5Q8WYK1 1306 aa14.62□□□□□ -0.07
TVP23B-204ENST00000571018 CCDC196A0A1B0GTZ2 297 aa14.61□□□□□ -0.07
TVP23B-204ENST00000571018 hCG_1642624A0A1W2PR95 340 aa14.61□□□□□ -0.07
TVP23B-204ENST00000571018 PIK3CDO00329 1044 aa14.61□□□□□ -0.07
TVP23B-204ENST00000571018 EIF5BO60841 1220 aaKnown RBP14.61□□□□□ -0.07
TVP23B-204ENST00000571018 TXNP10599 105 aaKnown RBP14.61□□□□□ -0.07
TVP23B-204ENST00000571018 PYGBP11216 843 aa14.61□□□□□ -0.07
TVP23B-204ENST00000571018 EVCP57679 992 aa14.61□□□□□ -0.07
TVP23B-204ENST00000571018 TTLL4Q14679 1199 aa14.61□□□□□ -0.07
TVP23B-204ENST00000571018 PGM5Q15124 567 aa14.61□□□□□ -0.07
TVP23B-204ENST00000571018 CCDC62Q6P9F0 684 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms