RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	CNPY2	Q9Y2B0	182 aa		13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	DDX49	Q9Y6V7	483 aa	Known RBP	13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	TRIP12	Q14669	1992 aa	Predicted RBP	13.3	□□□□□ -0.28
ATP2A3-208	ENST00000570845	LOC102724159	A0A0B4J2E5	919 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	SMCO2	A6NFE2	343 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845		B4DLN1	442 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	PIK3CD	O00329	1044 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	MEIS2	O14770	477 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	SNAI1	O95863	264 aa	Predicted RBP	13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	EIF2AK2	P19525	551 aa	Known RBP	13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	MCM2	P49736	904 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	MRPL12	P52815	198 aa	Known RBP	13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	PDE4D	Q08499	809 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	PWP2	Q15269	919 aa	Known RBP	13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	UBE2S	Q16763	222 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ARHGEF16	Q5VV41	709 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	TRPV1	Q8NER1	839 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	CCDC148	Q8NFR7	591 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	NSUN6	Q8TEA1	469 aa	Known RBP	13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	AIFM3	Q96NN9	605 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	TMEM106C	Q9BVX2	250 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ABHD16B	Q9H3Z7	469 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	RIC8A	Q9NPQ8	531 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	PXMP2	Q9NR77	195 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	VPS54	Q9P1Q0	977 aa		13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ORC3	Q9UBD5	711 aa	Predicted RBP	13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.29	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ESYT2	A0FGR8	921 aa		13.28	□□□□□ -0.28
ATP2A3-208	ENST00000570845	JAK2	O60674	1132 aa		13.28	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ACVR2B	Q13705	512 aa		13.28	□□□□□ -0.28
ATP2A3-208	ENST00000570845	EEPD1	Q7L9B9	569 aa		13.28	□□□□□ -0.28
ATP2A3-208	ENST00000570845	MORC4	Q8TE76	937 aa		13.28	□□□□□ -0.28
ATP2A3-208	ENST00000570845	TMX3	Q96JJ7	454 aa		13.28	□□□□□ -0.28
ATP2A3-208	ENST00000570845	C6orf50	Q9HD87	102 aa		13.28	□□□□□ -0.28
ATP2A3-208	ENST00000570845	PAK6	Q9NQU5	681 aa	Predicted RBP	13.28	□□□□□ -0.28
ATP2A3-208	ENST00000570845	SH3GLB2	Q9NR46	395 aa		13.28	□□□□□ -0.28
ATP2A3-208	ENST00000570845	NRBP1	Q9UHY1	535 aa		13.28	□□□□□ -0.28
ATP2A3-208	ENST00000570845	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.27	□□□□□ -0.29
ATP2A3-208	ENST00000570845	EDNRB	P24530	442 aa		13.27	□□□□□ -0.29
ATP2A3-208	ENST00000570845	PGM5	Q15124	567 aa		13.27	□□□□□ -0.29
ATP2A3-208	ENST00000570845	FBXO16	Q8IX29	292 aa	Predicted RBP	13.27	□□□□□ -0.29
ATP2A3-208	ENST00000570845	WASF1	Q92558	559 aa		13.27	□□□□□ -0.29
ATP2A3-208	ENST00000570845	SHISA4	Q96DD7	197 aa		13.27	□□□□□ -0.29
ATP2A3-208	ENST00000570845	DEFB118	Q96PH6	123 aa		13.27	□□□□□ -0.29
ATP2A3-208	ENST00000570845	IWS1	Q96ST2	819 aa		13.27	□□□□□ -0.29
ATP2A3-208	ENST00000570845	LLPH	Q9BRT6	129 aa	Known RBP	13.27	□□□□□ -0.29
ATP2A3-208	ENST00000570845	ZMYND12	Q9H0C1	365 aa		13.27	□□□□□ -0.29
ATP2A3-208	ENST00000570845	GLT8D2	Q9H1C3	349 aa		13.27	□□□□□ -0.29
ATP2A3-208	ENST00000570845	VTA1	Q9NP79	307 aa		13.27	□□□□□ -0.29
ATP2A3-208	ENST00000570845	SPDYE3	A6NKU9	549 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	SEPT4	O43236	478 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	GJB1	P08034	283 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	NR3C2	P08235	984 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	MYCL	P12524	364 aa	Predicted RBP	13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	FDPS	P14324	419 aa	Known RBP	13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	XBP1	P17861	261 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	GNA11	P29992	359 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	SOX10	P56693	466 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	NLRP5	P59047	1200 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	TCHH	Q07283	1943 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	FRMPD4	Q14CM0	1322 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	STXBP2	Q15833	593 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	CCDC144B	Q3MJ40	725 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	IL31RA	Q8NI17	732 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	PDCD2L	Q9BRP1	358 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	ALG1	Q9BT22	464 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	KATNBL1	Q9H079	304 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	TMEM260	Q9NX78	707 aa		13.26	□□□□□ -0.29
ATP2A3-208	ENST00000570845	MKI67	P46013	3256 aa	Known RBP	13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	POTEF	A5A3E0	1075 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	ADAMTS3	O15072	1205 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	MSC	O60682	206 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	AKR1A1	P14550	325 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	CCND2	P30279	289 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	CLK2	P49760	499 aa	Known RBP	13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	ANO1	Q5XXA6	986 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	TEX2	Q8IWB9	1127 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	FAM177A1	Q8N128	213 aa	Predicted RBP	13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	REXO1	Q8N1G1	1221 aa	Known RBP	13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	BICD2	Q8TD16	824 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	PGBD1	Q96JS3	809 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	EHMT1	Q9H9B1	1298 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	PDGFC	Q9NRA1	345 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	DDX20	Q9UHI6	824 aa	Known RBP	13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	FAM184B	Q9ULE4	1060 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	PCDHA6	Q9UN73	950 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	PCDHA8	Q9Y5H6	950 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	TNRC18	O15417	2968 aa	Predicted RBP	13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	SCN10A	Q9Y5Y9	1956 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	LOXHD1	Q8IVV2	1947 aa		13.25	□□□□□ -0.29
ATP2A3-208	ENST00000570845	EVPL	Q92817	2033 aa		13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	SGPL1	O95470	568 aa		13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	FOS	P01100	380 aa	Predicted RBP	13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	ADCYAP1R1	P41586	468 aa		13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	GJA8	P48165	433 aa		13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	FOSB	P53539	338 aa		13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	HMGN5	P82970	282 aa	Known RBP	13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	AP3B2	Q13367	1082 aa		13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	JAKMIP3	Q5VZ66	844 aa		13.24	□□□□□ -0.29
ATP2A3-208	ENST00000570845	TAPT1	Q6NXT6	567 aa		13.24	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms