RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 CCDC114Q96M63 670 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 MAGEF1Q9HAY2 307 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 VEZTQ9HBM0 779 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 SLC40A1Q9NP59 571 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 KBTBD4Q9NVX7 518 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 PCDH11XQ9BZA7 1347 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 PCDH11YQ9BZA8 1340 aa17.07■□□□□ 0.32
SMG6-207ENST00000570756 GLI1P08151 1106 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 SCG2P13521 617 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 FGFR2P21802 821 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 CALML3P27482 149 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 UBA7P41226 1012 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 MAGEA1P43355 309 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 TROAPQ12815 778 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 ITGB3BPQ13352 177 aaPredicted RBP17.06■□□□□ 0.32
SMG6-207ENST00000570756 SNCBQ16143 134 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 NAALADL2Q58DX5 795 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 MIIPQ5JXC2 388 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 C6orf89Q6UWU4 347 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 DTHD1Q6ZMT9 781 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 ZNF622Q969S3 477 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMG6-207ENST00000570756 TLR10Q9BXR5 811 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 CENPHQ9H3R5 247 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 EHD2Q9NZN4 543 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 ODF2LQ9ULJ1 636 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 CNTNAP5Q8WYK1 1306 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 SEC24CP53992 1094 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 CUEDC2Q9H467 287 aa17.06■□□□□ 0.32
SMG6-207ENST00000570756 GRID2IPA4D2P6 1211 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 FAM153BP0C7A2 387 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 FAM153CQ494X1 144 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 MEX3CQ5U5Q3 659 aaKnown RBP17.05■□□□□ 0.32
SMG6-207ENST00000570756 MAATS1Q7Z4T9 603 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 CCDC84Q86UT8 332 aaPredicted RBP17.05■□□□□ 0.32
SMG6-207ENST00000570756 C4orf32Q8N8J7 132 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 PIK3R5Q8WYR1 880 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 N4BP2L2Q92802 583 aaPredicted RBP17.05■□□□□ 0.32
SMG6-207ENST00000570756 CYFIP2Q96F07 1278 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 FAM153AQ9UHL3 310 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 PAPPAQ13219 1627 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 NCK2O43639 380 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 ANKRD40Q6AI12 368 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 MIGA1Q8NAN2 632 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 MAGEC3Q8TD91 643 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 FBXO41Q8TF61 875 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 PLCH1Q4KWH8 1693 aa17.05■□□□□ 0.32
SMG6-207ENST00000570756 GUCY2FP51841 1108 aa17.04■□□□□ 0.32
SMG6-207ENST00000570756 KLHDC7AQ5VTJ3 777 aa17.04■□□□□ 0.32
SMG6-207ENST00000570756 LRIG3Q6UXM1 1119 aa17.04■□□□□ 0.32
SMG6-207ENST00000570756 PARP9Q8IXQ6 854 aa17.04■□□□□ 0.32
SMG6-207ENST00000570756 SYNE4Q8N205 404 aa17.04■□□□□ 0.32
SMG6-207ENST00000570756 CCSER1Q9C0I3 900 aa17.04■□□□□ 0.32
SMG6-207ENST00000570756 IRS4O14654 1257 aaPredicted RBP17.04■□□□□ 0.32
SMG6-207ENST00000570756 PCP11498 1178 aaKnown RBP17.04■□□□□ 0.32
SMG6-207ENST00000570756 EZRP15311 586 aaKnown RBP17.04■□□□□ 0.32
SMG6-207ENST00000570756 GIGYF2Q6Y7W6 1299 aaKnown RBP17.04■□□□□ 0.32
SMG6-207ENST00000570756 ARMC9Q7Z3E5 817 aa17.04■□□□□ 0.32
SMG6-207ENST00000570756 LUC7LQ9NQ29 371 aaKnown RBP17.04■□□□□ 0.32
SMG6-207ENST00000570756 GMNCA6NCL1 334 aa17.03■□□□□ 0.32
SMG6-207ENST00000570756 GCOM1H8Y6P7 765 aaPredicted RBP17.03■□□□□ 0.32
SMG6-207ENST00000570756 MYZAPP0CAP1 466 aa17.03■□□□□ 0.32
SMG6-207ENST00000570756 HSPA9P38646 679 aaKnown RBP17.03■□□□□ 0.32
SMG6-207ENST00000570756 PDE4DQ08499 809 aa17.03■□□□□ 0.32
SMG6-207ENST00000570756 IFFO1Q0D2I5 559 aa17.03■□□□□ 0.32
SMG6-207ENST00000570756 PFKFB3Q16875 520 aaPredicted RBP17.03■□□□□ 0.32
SMG6-207ENST00000570756 TAX1BP1Q86VP1 789 aa17.03■□□□□ 0.32
SMG6-207ENST00000570756 NLRP10Q86W26 655 aa17.03■□□□□ 0.32
SMG6-207ENST00000570756 EIF1ADQ8N9N8 165 aaKnown RBP17.03■□□□□ 0.32
SMG6-207ENST00000570756 TMBIM4Q9HC24 238 aa17.03■□□□□ 0.32
SMG6-207ENST00000570756 PPANQ9NQ55 473 aaKnown RBP17.03■□□□□ 0.32
SMG6-207ENST00000570756 LRP2BPQ9P2M1 347 aa17.03■□□□□ 0.32
SMG6-207ENST00000570756 PLAAQ9Y263 795 aa17.03■□□□□ 0.32
SMG6-207ENST00000570756 COL14A1Q05707 1796 aaKnown RBP17.03■□□□□ 0.32
SMG6-207ENST00000570756 TNS2Q63HR2 1409 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 SPATA31A6Q5VVP1 1343 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 ESYT3A0FGR9 886 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 VWA3BQ502W6 1294 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 CYB5D1Q6P9G0 228 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 SRBD1Q8N5C6 995 aaKnown RBP17.02■□□□□ 0.32
SMG6-207ENST00000570756 P3H4Q92791 437 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 MIEF2Q96C03 454 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 EEF2KMTQ96G04 330 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 SGSM3Q96HU1 749 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 MS4A14Q96JA4 679 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 POLD4Q9HCU8 107 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 PLCB1Q9NQ66 1216 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 FAM207AQ9NSI2 230 aaPredicted RBP17.02■□□□□ 0.32
SMG6-207ENST00000570756 SIK3Q9Y2K2 1263 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 DUOX1Q9NRD9 1551 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 GCFC2P16383 781 aaKnown RBP17.02■□□□□ 0.32
SMG6-207ENST00000570756 HPDP32754 393 aaPredicted RBP17.02■□□□□ 0.32
SMG6-207ENST00000570756 MRPL12P52815 198 aaKnown RBP17.02■□□□□ 0.32
SMG6-207ENST00000570756 TNNC1P63316 161 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 CCDC178Q5BJE1 867 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 BLIDQ8IZY5 108 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 HELBQ8NG08 1087 aaPredicted RBP17.02■□□□□ 0.32
SMG6-207ENST00000570756 CASKIN2Q8WXE0 1202 aa17.02■□□□□ 0.32
SMG6-207ENST00000570756 SSU72P8A0A1W2PR75 194 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 PDE8AO60658 829 aa17.01■□□□□ 0.31
SMG6-207ENST00000570756 SLC8A1P32418 973 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms