RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 CMTR1Q8N1G2 835 aaKnown RBP12.89□□□□□ -0.35
SMG6-206ENST00000570668 PCSK9Q8NBP7 692 aaKnown RBP12.89□□□□□ -0.35
SMG6-206ENST00000570668 PIBF1Q8WXW3 757 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 FERMT2Q96AC1 680 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 AGXT2Q9BYV1 514 aa12.89□□□□□ -0.35
SMG6-206ENST00000570668 RBM28Q9NW13 759 aaKnown RBP12.89□□□□□ -0.35
SMG6-206ENST00000570668 SEC63Q9UGP8 760 aaKnown RBP12.89□□□□□ -0.35
SMG6-206ENST00000570668 KLF18A0A0U1RQI7 1052 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 GCOM1H8Y6P7 765 aaPredicted RBP12.88□□□□□ -0.35
SMG6-206ENST00000570668 POLR2MP0CAP2 368 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 ACLYP53396 1101 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 RTP1P59025 263 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 FGD1P98174 961 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 KCNA10Q16322 511 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 RTN1Q16799 776 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 GNASQ5JWF2 1037 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 TMEM63BQ5T3F8 832 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 Q6ZUG5 572 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 TLK2Q86UE8 772 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 SCFD2Q8WU76 684 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 WDR11Q9BZH6 1224 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 PXMP2Q9NR77 195 aa12.88□□□□□ -0.35
SMG6-206ENST00000570668 A0A1W2PQ45 241 aaPredicted RBP12.87□□□□□ -0.35
SMG6-206ENST00000570668 A0A1W2PQY0 241 aa12.87□□□□□ -0.35
SMG6-206ENST00000570668 DYNC1LI2O43237 492 aaPredicted RBP12.87□□□□□ -0.35
SMG6-206ENST00000570668 ASGR1P07306 291 aa12.87□□□□□ -0.35
SMG6-206ENST00000570668 NR3C2P08235 984 aa12.87□□□□□ -0.35
SMG6-206ENST00000570668 CASTP20810 708 aaKnown RBP12.87□□□□□ -0.35
SMG6-206ENST00000570668 HOXA13P31271 388 aaPredicted RBP12.87□□□□□ -0.35
SMG6-206ENST00000570668 FUT2Q10981 343 aa12.87□□□□□ -0.35
SMG6-206ENST00000570668 PPP2R5BQ15173 497 aa12.87□□□□□ -0.35
SMG6-206ENST00000570668 STXBP2Q15833 593 aa12.87□□□□□ -0.35
SMG6-206ENST00000570668 ARHGEF16Q5VV41 709 aa12.87□□□□□ -0.35
SMG6-206ENST00000570668 CCDC82Q8N4S0 544 aa12.87□□□□□ -0.35
SMG6-206ENST00000570668 BRF1Q92994 677 aa12.87□□□□□ -0.35
SMG6-206ENST00000570668 TM6SF1Q9BZW5 370 aa12.87□□□□□ -0.35
SMG6-206ENST00000570668 AP5M1Q9H0R1 490 aa12.87□□□□□ -0.35
SMG6-206ENST00000570668 ZSWIM6Q9HCJ5 1215 aa12.87□□□□□ -0.35
SMG6-206ENST00000570668 FAM217BQ9NTX9 383 aaPredicted RBP12.87□□□□□ -0.35
SMG6-206ENST00000570668 ELP1O95163 1332 aa12.87□□□□□ -0.35
SMG6-206ENST00000570668 TRIOBPQ9H2D6 2365 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 GOLGA8AA7E2F4 631 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 GOLGA8BA8MQT2 603 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 NKRFO15226 690 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMG6-206ENST00000570668 EIF3JO75822 258 aaKnown RBP12.86□□□□□ -0.35
SMG6-206ENST00000570668 EIF2AK2P19525 551 aaKnown RBP12.86□□□□□ -0.35
SMG6-206ENST00000570668 PTGS1P23219 599 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 EVCP57679 992 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 BEX3Q00994 111 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 APOBRQ0VD83 1088 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 TTLL4Q14679 1199 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 FSCN1Q16658 493 aaKnown RBP12.86□□□□□ -0.35
SMG6-206ENST00000570668 TRIM60Q495X7 471 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 CCDC62Q6P9F0 684 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 RUFY3Q7L099 469 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 GLT1D1Q96MS3 346 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 PDCD2LQ9BRP1 358 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 PRO3102Q9H379 93 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 STARD7Q9NQZ5 370 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 ZMYND8Q9ULU4 1186 aaPredicted RBP12.86□□□□□ -0.35
SMG6-206ENST00000570668 COLQQ9Y215 455 aaPredicted RBP12.86□□□□□ -0.35
SMG6-206ENST00000570668 CNTNAP5Q8WYK1 1306 aa12.86□□□□□ -0.35
SMG6-206ENST00000570668 NID2Q14112 1375 aa12.85□□□□□ -0.35
SMG6-206ENST00000570668 CCDC196A0A1B0GTZ2 297 aa12.85□□□□□ -0.35
SMG6-206ENST00000570668 hCG_1642624A0A1W2PR95 340 aa12.85□□□□□ -0.35
SMG6-206ENST00000570668 PIK3CDO00329 1044 aa12.85□□□□□ -0.35
SMG6-206ENST00000570668 EIF5BO60841 1220 aaKnown RBP12.85□□□□□ -0.35
SMG6-206ENST00000570668 TXNP10599 105 aaKnown RBP12.85□□□□□ -0.35
SMG6-206ENST00000570668 SYN1P17600 705 aa12.85□□□□□ -0.35
SMG6-206ENST00000570668 CDC27P30260 824 aa12.85□□□□□ -0.35
SMG6-206ENST00000570668 METAP2P50579 478 aaKnown RBP eCLIP12.85□□□□□ -0.35
SMG6-206ENST00000570668 CHRDL2Q6WN34 429 aa12.85□□□□□ -0.35
SMG6-206ENST00000570668 VSIG10LQ86VR7 867 aa12.85□□□□□ -0.35
SMG6-206ENST00000570668 ATP11BQ9Y2G3 1177 aa12.85□□□□□ -0.35
SMG6-206ENST00000570668 CYP46A1Q9Y6A2 500 aa12.85□□□□□ -0.35
SMG6-206ENST00000570668 KIAA1217Q5T5P2 1943 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 MEIS2O14770 477 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 ZEB2O60315 1214 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 CABYRO75952 493 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 ARIH2O95376 493 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 ADD1P35611 737 aaKnown RBP12.84□□□□□ -0.35
SMG6-206ENST00000570668 TLE2Q04725 743 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 PGM5Q15124 567 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 USP17L6PQ6QN14 398 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 CXCL17Q6UXB2 119 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 SEPT14Q6ZU15 432 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 ANKRD33Q7Z3H0 272 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 FCHSD1Q86WN1 690 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 CUL5Q93034 780 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 TOX2Q96NM4 488 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 GDF15Q99988 308 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 PSTPIP2Q9H939 334 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 NAP1L2Q9ULW6 460 aaPredicted RBP12.84□□□□□ -0.35
SMG6-206ENST00000570668 V9GY48 417 aaPredicted RBP12.84□□□□□ -0.35
SMG6-206ENST00000570668 FRMPD4Q14CM0 1322 aa12.84□□□□□ -0.35
SMG6-206ENST00000570668 LAMA3Q16787 3333 aa12.83□□□□□ -0.35
SMG6-206ENST00000570668 A6NJR5 290 aa12.83□□□□□ -0.36
SMG6-206ENST00000570668 RGS20O76081 388 aa12.83□□□□□ -0.36
SMG6-206ENST00000570668 MYCLP12524 364 aaPredicted RBP12.83□□□□□ -0.36
SMG6-206ENST00000570668 CPT1AP50416 773 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms