RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 MFAP1P55081 439 aaKnown RBP10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 RAB30Q15771 203 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 CHST3Q7LGC8 479 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 RPUSD2Q8IZ73 545 aaKnown RBP10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 ADGRF4Q8IZF3 695 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 MICALL1Q8N3F8 863 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 PNMA1Q8ND90 353 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 EXOC6Q8TAG9 804 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 SCFD2Q8WU76 684 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 TAAR1Q96RJ0 339 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 KAT14Q9H8E8 782 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 CERS4Q9HA82 394 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 ZSWIM5Q9P217 1185 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 COL20A1Q9P218 1284 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 GBF1Q92538 1859 aa10.08□□□□□ -0.8
CTDNEP1-203ENST00000570385 TET1Q8NFU7 2136 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 PRRC2BQ5JSZ5 2229 aaKnown RBP10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 SORBS3O60504 671 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 SUPT20HL2P0C7V6 817 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 PCP11498 1178 aaKnown RBP10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 ATP2A2P16615 1042 aaKnown RBP10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 NUCB1Q02818 461 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 LY6KQ17RY6 165 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 QRICH1Q2TAL8 776 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 BRDTQ58F21 947 aaPredicted RBP10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 GPATCH4Q5T3I0 446 aaKnown RBP10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 PPP2R2DQ66LE6 453 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 IQCA1Q86XH1 822 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 DGKHQ86XP1 1220 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 ENAHQ8N8S7 591 aaPredicted RBP10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 DNERQ8NFT8 737 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 SYTL5Q8TDW5 730 aaPredicted RBP10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 AFG1LQ8WV93 481 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 ZSCAN10Q96SZ4 725 aaPredicted RBP10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 MPHOSPH6Q99547 160 aaKnown RBP10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 FTOQ9C0B1 505 aaKnown RBP eCLIP10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 PNMA2Q9UL42 364 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 NOD1Q9Y239 953 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 RAD50Q92878 1312 aa10.07□□□□□ -0.8
CTDNEP1-203ENST00000570385 TRIP12Q14669 1992 aaPredicted RBP10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 SCN10AQ9Y5Y9 1956 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 LOC102724159A0A0B4J2E5 919 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 A6NJR5 290 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 RFXAPO00287 272 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 NKRFO15226 690 aaKnown RBP eCLIP10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 PARP1P09874 1014 aaKnown RBP10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 EIF2AK2P19525 551 aaKnown RBP10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 PWP2Q15269 919 aaKnown RBP10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 TJAP1Q5JTD0 557 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 CCDC62Q6P9F0 684 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 TICAM2Q86XR7 235 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 STAG2Q8N3U4 1231 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 RETREG2Q8NC44 543 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 ZFP91Q96JP5 570 aaPredicted RBP10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 RMDN3Q96TC7 470 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 SEZ6LQ9BYH1 1024 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 IL25Q9H293 177 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 OSBPL3Q9H4L5 887 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 JMJD4Q9H9V9 463 aa10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 BAZ2BQ9UIF8 2168 aaKnown RBP10.06□□□□□ -0.8
CTDNEP1-203ENST00000570385 B4DLN1 442 aa10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 KPNA6O60684 536 aa10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 CFBP00751 764 aa10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 GH1P01241 217 aa10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 MMP3P08254 477 aa10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 IQCF3P0C7M6 154 aa10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 MRPL12P52815 198 aaKnown RBP10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 PTGISQ16647 500 aa10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 IMMTQ16891 758 aaKnown RBP10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 ARHGEF16Q5VV41 709 aa10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 NFRKBQ6P4R8 1299 aa10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 TMCO2Q7Z6W1 182 aaPredicted RBP10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 FBXO11Q86XK2 927 aa10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 NSUN6Q8TEA1 469 aaKnown RBP10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 SYMPKQ92797 1274 aaKnown RBP10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 UBAC1Q9BSL1 405 aa10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 MYH6P13533 1939 aa10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 ABCB11O95342 1321 aa10.05□□□□□ -0.8
CTDNEP1-203ENST00000570385 ARHGEF15O94989 841 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 CA3P07451 260 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 MYCLP12524 364 aaPredicted RBP10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 HOXA13P31271 388 aaPredicted RBP10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 ARHGAP1Q07960 439 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 STXBP2Q15833 593 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 ASPRV1Q53RT3 343 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 CCDC178Q5BJE1 867 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 TMEM67Q5HYA8 995 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 IFIT1BQ5T764 474 aaKnown RBP10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 KRT40Q6A162 431 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 GDF6Q6KF10 455 aaPredicted RBP10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 CYB5R4Q7L1T6 521 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 HOMER1Q86YM7 354 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 MCF2L2Q86YR7 1114 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 RGS22Q8NE09 1264 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 ANKS1AQ92625 1134 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 KAT2BQ92831 832 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 ALG1Q9BT22 464 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 DSCC1Q9BVC3 393 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 KRT23Q9C075 422 aa10.04□□□□□ -0.8
CTDNEP1-203ENST00000570385 THEGQ9P2T0 379 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms