RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 NPHP3-ACAD11A0A0J9YXS1 232 aa7.98□□□□□ -1.13
CHD9-220ENST00000569794 EPHX1P07099 455 aa7.98□□□□□ -1.13
CHD9-220ENST00000569794 PAMP19021 973 aa7.98□□□□□ -1.13
CHD9-220ENST00000569794 FANCCQ00597 558 aa7.98□□□□□ -1.13
CHD9-220ENST00000569794 AMPD2Q01433 879 aa7.98□□□□□ -1.13
CHD9-220ENST00000569794 ADAT2Q7Z6V5 191 aaKnown RBP7.98□□□□□ -1.13
CHD9-220ENST00000569794 ARHGEF39Q8N4T4 335 aa7.98□□□□□ -1.13
CHD9-220ENST00000569794 LOXL4Q96JB6 756 aa7.98□□□□□ -1.13
CHD9-220ENST00000569794 C8orf49Q96NF6 230 aa7.98□□□□□ -1.13
CHD9-220ENST00000569794 C11orf84Q9BUA3 381 aaPredicted RBP7.98□□□□□ -1.13
CHD9-220ENST00000569794 PHAXQ9H814 394 aaKnown RBP7.98□□□□□ -1.13
CHD9-220ENST00000569794 SLC12A7Q9Y666 1083 aa7.98□□□□□ -1.13
CHD9-220ENST00000569794 TRBV23OR9-2A0A075B6M9 112 aa7.97□□□□□ -1.13
CHD9-220ENST00000569794 C7orf72A4D263 438 aa7.97□□□□□ -1.13
CHD9-220ENST00000569794 PPM1BO75688 479 aa7.97□□□□□ -1.13
CHD9-220ENST00000569794 NTRK1P04629 796 aa7.97□□□□□ -1.13
CHD9-220ENST00000569794 ZNF20P17024 532 aa7.97□□□□□ -1.13
CHD9-220ENST00000569794 RPL13P26373 211 aaKnown RBP7.97□□□□□ -1.13
CHD9-220ENST00000569794 THBS2P35442 1172 aa7.97□□□□□ -1.13
CHD9-220ENST00000569794 GRB10Q13322 594 aa7.97□□□□□ -1.13
CHD9-220ENST00000569794 RGL3Q3MIN7 710 aa7.97□□□□□ -1.13
CHD9-220ENST00000569794 CCDC81Q6ZN84 652 aa7.97□□□□□ -1.13
CHD9-220ENST00000569794 FGD4Q96M96 766 aa7.97□□□□□ -1.13
CHD9-220ENST00000569794 PCDHB10Q9UN67 800 aa7.97□□□□□ -1.13
CHD9-220ENST00000569794 NPHS1O60500 1241 aa7.96□□□□□ -1.14
CHD9-220ENST00000569794 FUCA1P04066 466 aa7.96□□□□□ -1.14
CHD9-220ENST00000569794 SLC7A5Q01650 507 aa7.96□□□□□ -1.14
CHD9-220ENST00000569794 RCC1LQ96I51 464 aaKnown RBP7.96□□□□□ -1.14
CHD9-220ENST00000569794 CRBNQ96SW2 442 aa7.96□□□□□ -1.14
CHD9-220ENST00000569794 SYT3Q9BQG1 590 aa7.96□□□□□ -1.14
CHD9-220ENST00000569794 PCDH18Q9HCL0 1135 aa7.96□□□□□ -1.14
CHD9-220ENST00000569794 RBM10P98175 930 aaKnown RBP7.95□□□□□ -1.14
CHD9-220ENST00000569794 KIAA2012Q0VF49 1180 aa7.95□□□□□ -1.14
CHD9-220ENST00000569794 COL9A2Q14055 689 aaPredicted RBP7.95□□□□□ -1.14
CHD9-220ENST00000569794 FAM26FQ5R3K3 315 aa7.95□□□□□ -1.14
CHD9-220ENST00000569794 ETV3LQ6ZN32 361 aa7.95□□□□□ -1.14
CHD9-220ENST00000569794 C19orf47Q8N9M1 422 aaKnown RBP7.95□□□□□ -1.14
CHD9-220ENST00000569794 PLEKHO2Q8TD55 490 aa7.95□□□□□ -1.14
CHD9-220ENST00000569794 BACH2Q9BYV9 841 aa7.95□□□□□ -1.14
CHD9-220ENST00000569794 METTL5Q9NRN9 209 aaKnown RBP7.95□□□□□ -1.14
CHD9-220ENST00000569794 INVSQ9Y283 1065 aa7.95□□□□□ -1.14
CHD9-220ENST00000569794 RACK1P63244 317 aaKnown RBP7.94□□□□□ -1.14
CHD9-220ENST00000569794 NPM2Q86SE8 214 aaKnown RBP7.94□□□□□ -1.14
CHD9-220ENST00000569794 MIB1Q86YT6 1006 aa7.94□□□□□ -1.14
CHD9-220ENST00000569794 DCP2Q8IU60 420 aaKnown RBP7.94□□□□□ -1.14
CHD9-220ENST00000569794 LGI4Q8N135 537 aa7.94□□□□□ -1.14
CHD9-220ENST00000569794 KYQ8NBH2 561 aa7.94□□□□□ -1.14
CHD9-220ENST00000569794 KLHL6Q8WZ60 621 aa7.94□□□□□ -1.14
CHD9-220ENST00000569794 SSBP3Q9BWW4 388 aaPredicted RBP7.94□□□□□ -1.14
CHD9-220ENST00000569794 GINM1Q9NU53 330 aa7.94□□□□□ -1.14
CHD9-220ENST00000569794 A0A1W2PQH9 124 aa7.93□□□□□ -1.14
CHD9-220ENST00000569794 MBLAC2Q68D91 279 aa7.93□□□□□ -1.14
CHD9-220ENST00000569794 FAM26EQ8N5C1 309 aa7.93□□□□□ -1.14
CHD9-220ENST00000569794 SLC16A11Q8NCK7 471 aa7.93□□□□□ -1.14
CHD9-220ENST00000569794 CLEC1BQ9P126 229 aa7.93□□□□□ -1.14
CHD9-220ENST00000569794 DDX41Q9UJV9 622 aaKnown RBP7.93□□□□□ -1.14
CHD9-220ENST00000569794 MROH6A6NGR9 719 aa7.92□□□□□ -1.14
CHD9-220ENST00000569794 ZNF16P17020 682 aaPredicted RBP7.92□□□□□ -1.14
CHD9-220ENST00000569794 GIPRP48546 466 aa7.92□□□□□ -1.14
CHD9-220ENST00000569794 EIF6P56537 245 aaKnown RBP7.92□□□□□ -1.14
CHD9-220ENST00000569794 C9orf131Q5VYM1 1079 aa7.92□□□□□ -1.14
CHD9-220ENST00000569794 BORAQ6PGQ7 559 aa7.92□□□□□ -1.14
CHD9-220ENST00000569794 FAM124AQ86V42 546 aa7.92□□□□□ -1.14
CHD9-220ENST00000569794 TTLL6Q8N841 843 aa7.92□□□□□ -1.14
CHD9-220ENST00000569794 ZNF513Q8N8E2 541 aaPredicted RBP7.92□□□□□ -1.14
CHD9-220ENST00000569794 DPF3Q92784 378 aa7.92□□□□□ -1.14
CHD9-220ENST00000569794 AP5M1Q9H0R1 490 aa7.92□□□□□ -1.14
CHD9-220ENST00000569794 SRRDQ9UH36 339 aa7.92□□□□□ -1.14
CHD9-220ENST00000569794 SGSM2O43147 1006 aa7.91□□□□□ -1.14
CHD9-220ENST00000569794 FSHBP01225 129 aa7.91□□□□□ -1.14
CHD9-220ENST00000569794 SOX9P48436 509 aa7.91□□□□□ -1.14
CHD9-220ENST00000569794 PRR31Q5SQ13 230 aa7.91□□□□□ -1.14
CHD9-220ENST00000569794 MCTP2Q6DN12 878 aa7.91□□□□□ -1.14
CHD9-220ENST00000569794 CD300LDQ6UXZ3 194 aa7.91□□□□□ -1.14
CHD9-220ENST00000569794 COPS5Q92905 334 aa7.91□□□□□ -1.14
CHD9-220ENST00000569794 DVL3Q92997 716 aaPredicted RBP7.91□□□□□ -1.14
CHD9-220ENST00000569794 MMP19Q99542 508 aa7.91□□□□□ -1.14
CHD9-220ENST00000569794 MARCH2Q9P0N8 246 aa7.91□□□□□ -1.14
CHD9-220ENST00000569794 SUGT1Q9Y2Z0 365 aa7.91□□□□□ -1.14
CHD9-220ENST00000569794 PLS3P13797 630 aa7.9□□□□□ -1.14
CHD9-220ENST00000569794 ITGA1P56199 1179 aa7.9□□□□□ -1.14
CHD9-220ENST00000569794 STK32CQ86UX6 486 aa7.9□□□□□ -1.14
CHD9-220ENST00000569794 TXNDC5Q8NBS9 432 aaKnown RBP7.9□□□□□ -1.14
CHD9-220ENST00000569794 CHST13Q8NET6 341 aa7.9□□□□□ -1.14
CHD9-220ENST00000569794 OR6P1Q8NGX9 317 aa7.9□□□□□ -1.14
CHD9-220ENST00000569794 ZNF536O15090 1300 aa7.89□□□□□ -1.15
CHD9-220ENST00000569794 SUV39H1O43463 412 aa7.89□□□□□ -1.15
CHD9-220ENST00000569794 PAK2Q13177 524 aa7.89□□□□□ -1.15
CHD9-220ENST00000569794 LIMS2Q7Z4I7 341 aa7.89□□□□□ -1.15
CHD9-220ENST00000569794 ZC3H18Q86VM9 953 aaKnown RBP7.89□□□□□ -1.15
CHD9-220ENST00000569794 GPRC5CQ9NQ84 441 aa7.89□□□□□ -1.15
CHD9-220ENST00000569794 APEX2Q9UBZ4 518 aa7.89□□□□□ -1.15
CHD9-220ENST00000569794 ST6GALNAC2Q9UJ37 374 aa7.89□□□□□ -1.15
CHD9-220ENST00000569794 AKT3Q9Y243 479 aa7.89□□□□□ -1.15
CHD9-220ENST00000569794 EFR3BQ9Y2G0 817 aa7.89□□□□□ -1.15
CHD9-220ENST00000569794 SCRN1Q12765 414 aa7.88□□□□□ -1.15
CHD9-220ENST00000569794 GLB1LQ6UWU2 654 aa7.88□□□□□ -1.15
CHD9-220ENST00000569794 TEX2Q8IWB9 1127 aa7.88□□□□□ -1.15
CHD9-220ENST00000569794 SEC14L1Q92503 715 aa7.88□□□□□ -1.15
CHD9-220ENST00000569794 SPATA32Q96LK8 384 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms