RNA–Protein interactions for RNA: ENST00000569784.1

SCAPER-223, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 4

Gene SCAPER, Length 580 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-223	ENST00000569784	KLHDC9	Q8NEP7	349 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	TMEM47	Q9BQJ4	181 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	ZKSCAN3	Q9BRR0	538 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	KAT14	Q9H8E8	782 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	CYP39A1	Q9NYL5	469 aa		10.01	□□□□□ -0.81
SCAPER-223	ENST00000569784	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	10	□□□□□ -0.81
SCAPER-223	ENST00000569784	MYL3	P08590	195 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	SDS	P20132	328 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	ITGA7	Q13683	1181 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	BAAT	Q14032	418 aa	Predicted RBP	10	□□□□□ -0.81
SCAPER-223	ENST00000569784	IMMT	Q16891	758 aa	Known RBP	10	□□□□□ -0.81
SCAPER-223	ENST00000569784	USH1G	Q495M9	461 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	FAM47C	Q5HY64	1035 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	TTBK2	Q6IQ55	1244 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	MFSD5	Q6N075	450 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	TICAM2	Q86XR7	235 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	FAM133A	Q8N9E0	248 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	OR6J1	Q8NGC5	347 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	TTC14	Q96N46	770 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	UBAC1	Q9BSL1	405 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	UPF3A	Q9H1J1	476 aa	Known RBP	10	□□□□□ -0.81
SCAPER-223	ENST00000569784	RANBP17	Q9H2T7	1088 aa	Known RBP	10	□□□□□ -0.81
SCAPER-223	ENST00000569784	VTA1	Q9NP79	307 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	CTNNA3	Q9UI47	895 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	ZNF536	O15090	1300 aa		10	□□□□□ -0.81
SCAPER-223	ENST00000569784	C3orf80	F5H4A9	247 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	SMPD1	P17405	629 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	FECH	P22830	423 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	CPT1A	P50416	773 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	ALDH5A1	P51649	535 aa	Predicted RBP	9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	GPATCH4	Q5T3I0	446 aa	Known RBP	9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	PSRC1	Q6PGN9	363 aa	Predicted RBP	9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	RASGRP2	Q7LDG7	609 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	ZNF589	Q86UQ0	364 aa	Predicted RBP	9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	MAFA	Q8NHW3	353 aa	Predicted RBP	9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	MYLIP	Q8WY64	445 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	GAS2L1	Q99501	681 aa	Predicted RBP	9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	CDX2	Q99626	313 aa	Predicted RBP	9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	SEZ6L	Q9BYH1	1024 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	WDR11	Q9BZH6	1224 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	SEMA6B	Q9H3T3	888 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	HIPK3	Q9H422	1215 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	TCP11L1	Q9NUJ3	509 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	POLR3E	Q9NVU0	708 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	MSRA	Q9UJ68	235 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	NOD1	Q9Y239	953 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	VPS9D1	Q9Y2B5	631 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	SALL3	Q9BXA9	1300 aa		9.99	□□□□□ -0.81
SCAPER-223	ENST00000569784	ZBBX	A8MT70	800 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	FGB	P02675	491 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	SUPT20HL2	P0C7V6	817 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	GOLGA8H	P0CJ92	632 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	ACR	P10323	421 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	PDHB	P11177	359 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	CSF2RA	P15509	400 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	ITGB8	P26012	769 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	TRDN	Q13061	729 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	PPP2R5B	Q15173	497 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	RPUSD2	Q8IZ73	545 aa	Known RBP	9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	PNMA1	Q8ND90	353 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	GUCD1	Q96NT3	240 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	KRT23	Q9C075	422 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	CNNM2	Q9H8M5	875 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	VAT1L	Q9HCJ6	419 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	PDGFC	Q9NRA1	345 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784		Q9Y3F1	56 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	ZMYM6	O95789	1325 aa		9.98	□□□□□ -0.81
SCAPER-223	ENST00000569784	MYH6	P13533	1939 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	TMEM265	A0A087WTH1	108 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	LOC102724159	A0A0B4J2E5	919 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	ERICH2	A1L162	156 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784		B4E1Z4	1266 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	NFIB	O00712	420 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	ADCY6	O43306	1168 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	KDM4A	O75164	1064 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	PARP1	P09874	1014 aa	Known RBP	9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	DNAJB2	P25686	324 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	CYP2C18	P33260	490 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	NT5C2	P49902	561 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	CCL23	P55773	120 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	PRSS12	P56730	875 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	PSMC6	P62333	389 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	ZNF543	Q08ER8	600 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	PWP2	Q15269	919 aa	Known RBP	9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	CCSAP	Q6IQ19	270 aa	Predicted RBP	9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	ADGRD1	Q6QNK2	874 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	BTNL9	Q6UXG8	535 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	ZNF365	Q70YC5	407 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	DGKH	Q86XP1	1220 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	MCF2L2	Q86YR7	1114 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	FAM126B	Q8IXS8	530 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	RETREG2	Q8NC44	543 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	EXOC6	Q8TAG9	804 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	RUFY2	Q8WXA3	655 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	PPM1E	Q8WY54	764 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	TIFA	Q96CG3	184 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	FGD4	Q96M96	766 aa		9.97	□□□□□ -0.81
SCAPER-223	ENST00000569784	PURB	Q96QR8	312 aa	Known RBP	9.97	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms