RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 GCFC2P16383 781 aaKnown RBP12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 UBA7P41226 1012 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 IREB2P48200 963 aaKnown RBP12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 TRAF1Q13077 416 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 TTLL12Q14166 644 aaPredicted RBP12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 IQCB1Q15051 598 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 CEP57L1Q8IYX8 460 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 LENG9Q96B70 501 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 MBOAT7Q96N66 472 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 COL20A1Q9P218 1284 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 TXLNAP40222 546 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 NLRP12P59046 1061 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 PRR16Q569H4 304 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 TREML2Q5T2D2 321 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 CABP7Q86V35 215 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 IQUBQ8NA54 791 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 OTUD5Q96G74 571 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 ZFP91Q96JP5 570 aaPredicted RBP12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 CCSER1Q9C0I3 900 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 TTC12Q9H892 705 aaPredicted RBP12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 TMOD4Q9NZQ9 345 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 LOC285556D6RIA3 1793 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 CYP3A7-CYP3A51PA0A087WV96 503 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 TRAF5O00463 557 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 CYP3A7P24462 503 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 FXR2P51116 673 aaKnown RBP eCLIP12.35□□□□□ -0.437e-14■■□□□ 12.6
PDXDC1-216ENST00000569715 UVSSAQ2YD98 709 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 MAP1SQ66K74 1059 aaPredicted RBP12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 REPS2Q8NFH8 660 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 KCNMB3Q9NPA1 279 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 MAN1B1Q9UKM7 699 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 RIPK3Q9Y572 518 aa12.35□□□□□ -0.43
PDXDC1-216ENST00000569715 STAT6P42226 847 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 DHX40Q8IX18 779 aaKnown RBP12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 RASSF8Q8NHQ8 419 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 AK8Q96MA6 479 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 NUDT12Q9BQG2 462 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 BLZF1Q9H2G9 400 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 IRF6O14896 467 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 PLCG1P19174 1290 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 NF2P35240 595 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 SARSP49591 514 aaKnown RBP12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 SH3D19Q5HYK7 790 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 CATSPERGQ6ZRH7 1159 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 CLEC11AQ9Y240 323 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 DSG3P32926 999 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 HSD17B4P51659 736 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 NT5DC1Q5TFE4 455 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 MCTP2Q6DN12 878 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 KANK3Q6NY19 840 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 LRWD1Q9UFC0 647 aa12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 HOOK1Q9UJC3 728 aaKnown RBP12.34□□□□□ -0.43
PDXDC1-216ENST00000569715 PEX10O60683 326 aa12.33□□□□□ -0.43
PDXDC1-216ENST00000569715 ZBED4O75132 1171 aa12.33□□□□□ -0.43
PDXDC1-216ENST00000569715 DPYDQ12882 1025 aa12.33□□□□□ -0.43
PDXDC1-216ENST00000569715 RRAGBQ5VZM2 374 aa12.33□□□□□ -0.43
PDXDC1-216ENST00000569715 MOXD1Q6UVY6 613 aa12.33□□□□□ -0.43
PDXDC1-216ENST00000569715 AOPEPQ8N6M6 819 aa12.33□□□□□ -0.43
PDXDC1-216ENST00000569715 SPATA20Q8TB22 786 aa12.33□□□□□ -0.43
PDXDC1-216ENST00000569715 ETNPPLQ8TBG4 499 aa12.33□□□□□ -0.43
PDXDC1-216ENST00000569715 SMARCE1Q969G3 411 aa12.33□□□□□ -0.43
PDXDC1-216ENST00000569715 PLCB2Q00722 1185 aa12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 CUL4BQ13620 913 aa12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 TMEM266Q2M3C6 531 aa12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 PNMA8AQ86V59 439 aaPredicted RBP12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 ANKRD13AQ8IZ07 590 aa12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 CTDP1Q9Y5B0 961 aaPredicted RBP12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 SPDYE16A6NNV3 312 aaPredicted RBP12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 STAT3P40763 770 aa12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 TMEM132BQ14DG7 1078 aa12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 POTEEQ6S8J3 1075 aa12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 SLC30A10Q6XR72 485 aa12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 ANP32BQ92688 251 aaKnown RBP12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 PDLIM2Q96JY6 352 aa12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 PPP1R9BQ96SB3 815 aa12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 NAP1L4Q99733 375 aaKnown RBP12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 ZNF214Q9UL59 606 aaPredicted RBP12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 ADAMTS5Q9UNA0 930 aa12.33□□□□□ -0.44
PDXDC1-216ENST00000569715 IGLV3-22A0A075B6J6 115 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 MARCH6O60337 910 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 CYP3A4P08684 503 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 CIITAP33076 1130 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 CCDC173Q0VFZ6 552 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 GRB10Q13322 594 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 COG2Q14746 738 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 Q4G0T1 1027 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 IL31RAQ8NI17 732 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 RBM46Q8TBY0 533 aaKnown RBP12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 PURBQ96QR8 312 aaKnown RBP12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 ZNF408Q9H9D4 720 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 SNRNP48Q6IEG0 339 aaKnown RBP12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 TRERF1Q96PN7 1200 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 PNMA5Q96PV4 448 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 PCDHA12Q9UN75 941 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 SPDYE5A6NIY4 337 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 MSH4O15457 936 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 CAVIN2O95810 425 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 MORC3Q14149 939 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 ECM1Q16610 540 aa12.32□□□□□ -0.44
PDXDC1-216ENST00000569715 GADL1Q6ZQY3 521 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms