RNA–Protein interactions for RNA: ENST00000569603.1

LINC00556-201, long intergenic non-protein coding RNA 556, humanhuman

BASIC

Gene LINC00556, Length 412 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00556-201ENST00000569603 IDH3AP50213 366 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 LACTBP83111 547 aaPredicted RBP7.56□□□□□ -1.2
LINC00556-201ENST00000569603 PPATQ06203 517 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 DPYDQ12882 1025 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 PTK7Q13308 1070 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 TAF1CQ15572 869 aaPredicted RBP7.56□□□□□ -1.2
LINC00556-201ENST00000569603 SPTY2D1Q68D10 685 aaPredicted RBP7.56□□□□□ -1.2
LINC00556-201ENST00000569603 C17orf99Q6UX52 265 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 MIGA2Q7L4E1 593 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 KRT25Q7Z3Z0 450 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 HINFPQ9BQA5 517 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 API5Q9BZZ5 524 aaKnown RBP7.56□□□□□ -1.2
LINC00556-201ENST00000569603 SIL1Q9H173 461 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 TNNQ9UQP3 1299 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 CSADQ9Y600 493 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 PTCH2Q9Y6C5 1203 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 VCANP13611 3396 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 FOCADQ5VW36 1801 aa7.56□□□□□ -1.2
LINC00556-201ENST00000569603 COL2A1P02458 1487 aaPredicted RBP7.55□□□□□ -1.2
LINC00556-201ENST00000569603 CDH23Q9H251 3354 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 FRAT2O75474 233 aaPredicted RBP7.55□□□□□ -1.2
LINC00556-201ENST00000569603 IGFBP4P22692 258 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 RHBDL3P58872 404 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 SNAPC2Q13487 334 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 LRP8Q14114 963 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 PERM1Q5SV97 790 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 DCAF15Q66K64 600 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 UBE2Q1Q7Z7E8 422 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 ANKRD23Q86SG2 305 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 ZNF341Q9BYN7 854 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 ZFYVE28Q9HCC9 887 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 DDX4Q9NQI0 724 aaKnown RBP7.55□□□□□ -1.2
LINC00556-201ENST00000569603 DENND2AQ9ULE3 1009 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 PPME1Q9Y570 386 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 LOC285556D6RIA3 1793 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 EYSQ5T1H1 3165 aa7.55□□□□□ -1.2
LINC00556-201ENST00000569603 PRUNE2Q8WUY3 3088 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 GPR75-ASB3A0A0A6YYF3 556 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 A0A1B0GUL7 405 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 ENTPD3O75355 529 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 LDHBP07195 334 aaKnown RBP7.54□□□□□ -1.2
LINC00556-201ENST00000569603 EN2P19622 333 aaPredicted RBP7.54□□□□□ -1.2
LINC00556-201ENST00000569603 RGS3P49796 1198 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 TIMM10P62072 90 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 TCP10Q12799 353 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 GLIPR1L2Q4G1C9 344 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 DHX32Q7L7V1 743 aaKnown RBP7.54□□□□□ -1.2
LINC00556-201ENST00000569603 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.54□□□□□ -1.2
LINC00556-201ENST00000569603 SHISA4Q96DD7 197 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 HOOK2Q96ED9 719 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 IFT43Q96FT9 208 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 USP40Q9NVE5 1235 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 GNL3LQ9NVN8 582 aaKnown RBP7.54□□□□□ -1.2
LINC00556-201ENST00000569603 TMOD2Q9NZR1 351 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 ATAD5Q96QE3 1844 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 MAST2Q6P0Q8 1798 aa7.54□□□□□ -1.2
LINC00556-201ENST00000569603 A0A0G2JLL6 359 aaPredicted RBP7.53□□□□□ -1.2
LINC00556-201ENST00000569603 PNMA6EA0A0J9YXQ4 647 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 DDTLA6NHG4 134 aaPredicted RBP7.53□□□□□ -1.2
LINC00556-201ENST00000569603 HMGB1P1B2RPK0 211 aaPredicted RBP7.53□□□□□ -1.2
LINC00556-201ENST00000569603 USP17L15C9J2P7 530 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 USP17L10C9JJH3 530 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 USP17L13C9JLJ4 530 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 USP17L12C9JPN9 530 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 USP17L11C9JVI0 530 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 USP17L21D6R901 530 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 USP17L18D6R9N7 530 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 USP17L22D6RA61 530 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 USP17L17D6RBQ6 530 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 USP17L19D6RCP7 530 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 USP17L20D6RJB6 530 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 CXCL11O14625 94 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 SRGAP3O43295 1099 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 MAP3K6O95382 1288 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 PTPRAP18433 802 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 TARSP26639 723 aaKnown RBP7.53□□□□□ -1.2
LINC00556-201ENST00000569603 ARID4AP29374 1257 aaPredicted RBP7.53□□□□□ -1.2
LINC00556-201ENST00000569603 NOS3P29474 1203 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 MECOMQ03112 1051 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 USP17L24Q0WX57 530 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 TFCP2Q12800 502 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 PI16Q6UXB8 463 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 ATF7IPQ6VMQ6 1270 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 PRRT2Q7Z6L0 340 aaPredicted RBP7.53□□□□□ -1.2
LINC00556-201ENST00000569603 FBXO11Q86XK2 927 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 TMTC2Q8N394 836 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 WFDC12Q8WWY7 111 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 FRRS1LQ9P0K9 344 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 HMG20BQ9P0W2 317 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 AFG3L2Q9Y4W6 797 aa7.53□□□□□ -1.2
LINC00556-201ENST00000569603 MROH7-TTC4A0A0A0MT08 1334 aa7.52□□□□□ -1.2
LINC00556-201ENST00000569603 PDHXO00330 501 aa7.52□□□□□ -1.21
LINC00556-201ENST00000569603 HYAL3O43820 417 aaPredicted RBP7.52□□□□□ -1.21
LINC00556-201ENST00000569603 BCAR3O75815 825 aa7.52□□□□□ -1.21
LINC00556-201ENST00000569603 GNAI3P08754 354 aa7.52□□□□□ -1.21
LINC00556-201ENST00000569603 EPB42P16452 691 aa7.52□□□□□ -1.21
LINC00556-201ENST00000569603 MCAMP43121 646 aa7.52□□□□□ -1.21
LINC00556-201ENST00000569603 RRP1BQ14684 758 aaKnown RBP7.52□□□□□ -1.21
LINC00556-201ENST00000569603 SCYL3Q8IZE3 742 aa7.52□□□□□ -1.21
LINC00556-201ENST00000569603 ZGPATQ8N5A5 531 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms