RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 UPF3AQ9H1J1 476 aaKnown RBP15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 ZSWIM6Q9HCJ5 1215 aa15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 PHF24Q9UPV7 400 aa15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 GNEQ9Y223 722 aaKnown RBP15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 Q9Y3F1 56 aa15.97■□□□□ 0.15
HERPUD1-218ENST00000569569 RBM47A0AV96 593 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-218ENST00000569569 GOLGA8AA7E2F4 631 aa15.96■□□□□ 0.15
HERPUD1-218ENST00000569569 GOLGA8BA8MQT2 603 aa15.96■□□□□ 0.15
HERPUD1-218ENST00000569569 GCOM1H8Y6P7 765 aaPredicted RBP15.96■□□□□ 0.15
HERPUD1-218ENST00000569569 C6orf222P0C671 652 aaPredicted RBP15.96■□□□□ 0.15
HERPUD1-218ENST00000569569 POLR2MP0CAP2 368 aa15.96■□□□□ 0.15
HERPUD1-218ENST00000569569 SMPD1P17405 629 aa15.96■□□□□ 0.15
HERPUD1-218ENST00000569569 CST5P28325 142 aaPredicted RBP15.96■□□□□ 0.15
HERPUD1-218ENST00000569569 APOBRQ0VD83 1088 aa15.96■□□□□ 0.15
HERPUD1-218ENST00000569569 PCSK9Q8NBP7 692 aaKnown RBP15.96■□□□□ 0.15
HERPUD1-218ENST00000569569 NAP1L2Q9ULW6 460 aaPredicted RBP15.96■□□□□ 0.15
HERPUD1-218ENST00000569569 CYP46A1Q9Y6A2 500 aa15.96■□□□□ 0.15
HERPUD1-218ENST00000569569 CCDC196A0A1B0GTZ2 297 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 MOXD2PA6NHM9 499 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 H0YGN5 161 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 HOXA13P31271 388 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 METAP2P50579 478 aaKnown RBP eCLIP15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 ATN1P54259 1190 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 NKX3-2P78367 333 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 STXBP2Q15833 593 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 KCNA10Q16322 511 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 LRRC26Q2I0M4 334 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 DUSP28Q4G0W2 176 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 GNASQ5JWF2 1037 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 CCSAPQ6IQ19 270 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 SLC39A5Q6ZMH5 540 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 FERMT2Q96AC1 680 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 WDR11Q9BZH6 1224 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 AP5M1Q9H0R1 490 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 PXMP2Q9NR77 195 aa15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 FAM217BQ9NTX9 383 aaPredicted RBP15.95■□□□□ 0.14
HERPUD1-218ENST00000569569 MYADML2A6NDP7 307 aa15.94■□□□□ 0.14
HERPUD1-218ENST00000569569 DYNC1LI2O43237 492 aaPredicted RBP15.94■□□□□ 0.14
HERPUD1-218ENST00000569569 NR3C2P08235 984 aa15.94■□□□□ 0.14
HERPUD1-218ENST00000569569 EIF2AK2P19525 551 aaKnown RBP15.94■□□□□ 0.14
HERPUD1-218ENST00000569569 CDC27P30260 824 aa15.94■□□□□ 0.14
HERPUD1-218ENST00000569569 ACLYP53396 1101 aa15.94■□□□□ 0.14
HERPUD1-218ENST00000569569 TLK2Q86UE8 772 aa15.94■□□□□ 0.14
HERPUD1-218ENST00000569569 C7orf61Q8IZ16 206 aa15.94■□□□□ 0.14
HERPUD1-218ENST00000569569 SCFD2Q8WU76 684 aa15.94■□□□□ 0.14
HERPUD1-218ENST00000569569 CNTNAP5Q8WYK1 1306 aa15.94■□□□□ 0.14
HERPUD1-218ENST00000569569 A0A1W2PQ45 241 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 A0A1W2PQY0 241 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 hCG_1642624A0A1W2PR95 340 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 NKRFO15226 690 aaKnown RBP eCLIP15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 CTAGE5O15320 804 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 EIF3JO75822 258 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 ASGR1P07306 291 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 ADD1P35611 737 aaKnown RBP15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 EVCP57679 992 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 ANAPC15P60006 121 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 IRX5P78411 483 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 FUT2Q10981 343 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 TTLL4Q14679 1199 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 SNX17Q15036 470 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 TMEM63BQ5T3F8 832 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 C1orf53Q5VUE5 145 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 FCHSD1Q86WN1 690 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 CUL5Q93034 780 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 PDCD2LQ9BRP1 358 aa15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 V9GY48 417 aaPredicted RBP15.93■□□□□ 0.14
HERPUD1-218ENST00000569569 NID2Q14112 1375 aa15.92■□□□□ 0.14
HERPUD1-218ENST00000569569 PIK3CDO00329 1044 aa15.92■□□□□ 0.14
HERPUD1-218ENST00000569569 ZEB2O60315 1214 aa15.92■□□□□ 0.14
HERPUD1-218ENST00000569569 RTP1P59025 263 aa15.92■□□□□ 0.14
HERPUD1-218ENST00000569569 BEX3Q00994 111 aa15.92■□□□□ 0.14
HERPUD1-218ENST00000569569 TOB2Q14106 344 aaPredicted RBP15.92■□□□□ 0.14
HERPUD1-218ENST00000569569 PGM5Q15124 567 aa15.92■□□□□ 0.14
HERPUD1-218ENST00000569569 SMARCC2Q8TAQ2 1214 aa15.92■□□□□ 0.14
HERPUD1-218ENST00000569569 GLT1D1Q96MS3 346 aa15.92■□□□□ 0.14
HERPUD1-218ENST00000569569 UPF3BQ9BZI7 483 aaKnown RBP15.92■□□□□ 0.14
HERPUD1-218ENST00000569569 PSTPIP2Q9H939 334 aa15.92■□□□□ 0.14
HERPUD1-218ENST00000569569 STARD7Q9NQZ5 370 aa15.92■□□□□ 0.14
HERPUD1-218ENST00000569569 MEIS2O14770 477 aa15.91■□□□□ 0.14
HERPUD1-218ENST00000569569 TXNP10599 105 aaKnown RBP15.91■□□□□ 0.14
HERPUD1-218ENST00000569569 MYCLP12524 364 aaPredicted RBP15.91■□□□□ 0.14
HERPUD1-218ENST00000569569 PDIA3P30101 505 aaKnown RBP15.91■□□□□ 0.14
HERPUD1-218ENST00000569569 FSCN1Q16658 493 aaKnown RBP15.91■□□□□ 0.14
HERPUD1-218ENST00000569569 USP17L6PQ6QN14 398 aa15.91■□□□□ 0.14
HERPUD1-218ENST00000569569 SEPT14Q6ZU15 432 aa15.91■□□□□ 0.14
HERPUD1-218ENST00000569569 HEATR3Q7Z4Q2 680 aa15.91■□□□□ 0.14
HERPUD1-218ENST00000569569 VSIG10LQ86VR7 867 aa15.91■□□□□ 0.14
HERPUD1-218ENST00000569569 PDRG1Q9NUG6 133 aa15.91■□□□□ 0.14
HERPUD1-218ENST00000569569 ATP11BQ9Y2G3 1177 aa15.91■□□□□ 0.14
HERPUD1-218ENST00000569569 ELP1O95163 1332 aa15.91■□□□□ 0.14
HERPUD1-218ENST00000569569 hCG_1984214I3L0E3 225 aa15.9■□□□□ 0.14
HERPUD1-218ENST00000569569 CABYRO75952 493 aa15.9■□□□□ 0.14
HERPUD1-218ENST00000569569 PTGS1P23219 599 aa15.9■□□□□ 0.14
HERPUD1-218ENST00000569569 CCND2P30279 289 aa15.9■□□□□ 0.14
HERPUD1-218ENST00000569569 CCDC62Q6P9F0 684 aa15.9■□□□□ 0.14
HERPUD1-218ENST00000569569 ZNF713Q8N859 430 aaPredicted RBP15.9■□□□□ 0.14
HERPUD1-218ENST00000569569 OR6J1Q8NGC5 347 aa15.9■□□□□ 0.14
HERPUD1-218ENST00000569569 GPKOWQ92917 476 aaPredicted RBP eCLIP15.9■□□□□ 0.142e-6■■■■□ 23.1
HERPUD1-218ENST00000569569 VTI1AQ96AJ9 217 aa15.9■□□□□ 0.14
HERPUD1-218ENST00000569569 ZNF274Q96GC6 653 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms