RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 ZNF202O95125 648 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 OR52Z1P0C646 297 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 POLR2MP0CAP2 368 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 CCDC192P0DO97 292 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 LONP1P36776 959 aaKnown RBP8.66□□□□□ -1.02
CDH13-214ENST00000569455 USP11P51784 963 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 NDUFA8P51970 172 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 OAZ1P54368 228 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 USP17L24Q0WX57 530 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 SNW1Q13573 536 aaKnown RBP8.66□□□□□ -1.02
CDH13-214ENST00000569455 COG2Q14746 738 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 CAMK4Q16566 473 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 USP17L6PQ6QN14 398 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 MOXD1Q6UVY6 613 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 DTHD1Q6ZMT9 781 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 MCF2L2Q86YR7 1114 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 SAMD3Q8N6K7 520 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 PROCA1Q8NCQ7 364 aaPredicted RBP8.66□□□□□ -1.02
CDH13-214ENST00000569455 OTUD5Q96G74 571 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 CLIC6Q96NY7 704 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 CSRNP2Q9H175 543 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 SLC38A10Q9HBR0 1119 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 MAP3K20Q9NYL2 800 aaKnown RBP8.66□□□□□ -1.02
CDH13-214ENST00000569455 HPSEQ9Y251 543 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 RLFQ13129 1914 aa8.66□□□□□ -1.02
CDH13-214ENST00000569455 COL11A1P12107 1806 aaPredicted RBP8.66□□□□□ -1.02
CDH13-214ENST00000569455 A0A0G2JLL6 359 aaPredicted RBP8.65□□□□□ -1.02
CDH13-214ENST00000569455 FSD2A1L4K1 749 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 WNT7AO00755 349 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 MEIS2O14770 477 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 CFBP00751 764 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 DSG3P32926 999 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 MRE11P49959 708 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 PABPC4Q13310 644 aaKnown RBP eCLIP8.65□□□□□ -1.02
CDH13-214ENST00000569455 ZRSR1Q15695 479 aaKnown RBP8.65□□□□□ -1.02
CDH13-214ENST00000569455 CALCRLQ16602 461 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 TMEM266Q2M3C6 531 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 PPP4R3AQ6IN85 833 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 KANK3Q6NY19 840 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 SASS6Q6UVJ0 657 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 CATSPERGQ6ZRH7 1159 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 RBM43Q6ZSC3 357 aaKnown RBP8.65□□□□□ -1.02
CDH13-214ENST00000569455 PRRT2Q7Z6L0 340 aaPredicted RBP8.65□□□□□ -1.02
CDH13-214ENST00000569455 ELOA2Q8IYF1 753 aaPredicted RBP8.65□□□□□ -1.02
CDH13-214ENST00000569455 CPXCR1Q8N123 301 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 C4orf32Q8N8J7 132 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 MS4A4AQ96JQ5 239 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 AK8Q96MA6 479 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 ZIC5Q96T25 663 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 RAB34Q9BZG1 259 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 HOXC10Q9NYD6 342 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.65□□□□□ -1.02
CDH13-214ENST00000569455 USP25Q9UHP3 1055 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 RABGAP1Q9Y3P9 1069 aa8.65□□□□□ -1.02
CDH13-214ENST00000569455 ZNF536O15090 1300 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 VWA5AO00534 786 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 MARCH6O60337 910 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 CAVIN2O95810 425 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 ALAS1P13196 640 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 SREBF1P36956 1147 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 ARHGAP4P98171 946 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 GRIN1Q05586 938 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 PKN2Q16513 984 aaKnown RBP8.64□□□□□ -1.03
CDH13-214ENST00000569455 TKFCQ3LXA3 575 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 KRBA2Q6ZNG9 492 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 GADL1Q6ZQY3 521 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 ANKRD23Q86SG2 305 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 CKAP2LQ8IYA6 745 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 CNNM3Q8NE01 707 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 SYMPKQ92797 1274 aaKnown RBP8.64□□□□□ -1.03
CDH13-214ENST00000569455 ATG4CQ96DT6 458 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 AGBL1Q96MI9 1066 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 MAF1Q9H063 256 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 GRPEL1Q9HAV7 217 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 RAVER2Q9HCJ3 691 aaKnown RBP8.64□□□□□ -1.03
CDH13-214ENST00000569455 CCDC39Q9UFE4 941 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 DDX25Q9UHL0 483 aaKnown RBP8.64□□□□□ -1.03
CDH13-214ENST00000569455 ADAMTS5Q9UNA0 930 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 MRVI1Q9Y6F6 885 aa8.64□□□□□ -1.03
CDH13-214ENST00000569455 CYP3A7-CYP3A51PA0A087WV96 503 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 CCL15-CCL14A0A0B4J2E2 113 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 OPLAHO14841 1288 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 ATP2A1O14983 1001 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 POLR2DO15514 142 aaKnown RBP8.63□□□□□ -1.03
CDH13-214ENST00000569455 TRPA1O75762 1119 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 TDP2O95551 362 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 CYP3A4P08684 503 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 CYP3A7P24462 503 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 HOXA7P31268 230 aaPredicted RBP8.63□□□□□ -1.03
CDH13-214ENST00000569455 HOXA13P31271 388 aaPredicted RBP8.63□□□□□ -1.03
CDH13-214ENST00000569455 DEKP35659 375 aaKnown RBP8.63□□□□□ -1.03
CDH13-214ENST00000569455 GJA5P36382 358 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 ZNF76P36508 570 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 UBA7P41226 1012 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 GHRHRQ02643 423 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 CCL15Q16663 113 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 SPECC1Q5M775 1068 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 FCHSD1Q86WN1 690 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 GAS2L3Q86XJ1 694 aa8.63□□□□□ -1.03
CDH13-214ENST00000569455 IFNL1Q8IU54 200 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms