RNA–Protein interactions for RNA: ENST00000569053.5

TMX3-210, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 1 (best)

Gene TMX3, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-210ENST00000569053 DEFB128Q7Z7B8 93 aa12.82□□□□□ -0.36
TMX3-210ENST00000569053 ADAMTS19Q8TE59 1207 aa12.82□□□□□ -0.36
TMX3-210ENST00000569053 ATXN2LQ8WWM7 1075 aaKnown RBP12.82□□□□□ -0.36
TMX3-210ENST00000569053 CERS4Q9HA82 394 aa12.82□□□□□ -0.36
TMX3-210ENST00000569053 SLC28A3Q9HAS3 691 aa12.82□□□□□ -0.36
TMX3-210ENST00000569053 TCP11L1Q9NUJ3 509 aa12.82□□□□□ -0.36
TMX3-210ENST00000569053 THEGQ9P2T0 379 aa12.82□□□□□ -0.36
TMX3-210ENST00000569053 TANC1Q9C0D5 1861 aa12.81□□□□□ -0.36
TMX3-210ENST00000569053 TRANK1O15050 2925 aa12.81□□□□□ -0.36
TMX3-210ENST00000569053 PTPDC1A2A3K4 754 aa12.81□□□□□ -0.36
TMX3-210ENST00000569053 GOLGA8HP0CJ92 632 aa12.81□□□□□ -0.36
TMX3-210ENST00000569053 SNHG28P0DPA3 235 aa12.81□□□□□ -0.36
TMX3-210ENST00000569053 HSPD1P10809 573 aaKnown RBP12.81□□□□□ -0.36
TMX3-210ENST00000569053 TOP1P11387 765 aaKnown RBP12.81□□□□□ -0.36
TMX3-210ENST00000569053 COL9A1P20849 921 aa12.81□□□□□ -0.36
TMX3-210ENST00000569053 ZNF543Q08ER8 600 aa12.81□□□□□ -0.36
TMX3-210ENST00000569053 NMIQ13287 307 aaPredicted RBP12.81□□□□□ -0.36
TMX3-210ENST00000569053 LRRFIP1Q32MZ4 808 aaKnown RBP12.81□□□□□ -0.36
TMX3-210ENST00000569053 ANKRD45Q5TZF3 282 aa12.81□□□□□ -0.36
TMX3-210ENST00000569053 OR6J1Q8NGC5 347 aa12.81□□□□□ -0.36
TMX3-210ENST00000569053 HELLSQ9NRZ9 838 aa12.81□□□□□ -0.36
TMX3-210ENST00000569053 COL20A1Q9P218 1284 aa12.81□□□□□ -0.36
TMX3-210ENST00000569053 PCDHA11Q9Y5I1 949 aa12.81□□□□□ -0.36
TMX3-210ENST00000569053 SLC4A7Q9Y6M7 1214 aa12.81□□□□□ -0.36
TMX3-210ENST00000569053 NCOR1O75376 2440 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 A6NJR5 290 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 ZBBXA8MT70 800 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 ZEB2O60315 1214 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 CA3P07451 260 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 BMP1P13497 986 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 ATP2A2P16615 1042 aaKnown RBP12.8□□□□□ -0.36
TMX3-210ENST00000569053 KCNQ1P51787 676 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 PPP2R2DQ66LE6 453 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 RNF207Q6ZRF8 634 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 TMCO2Q7Z6W1 182 aaPredicted RBP12.8□□□□□ -0.36
TMX3-210ENST00000569053 EVI5LQ96CN4 794 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 CRBNQ96SW2 442 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 ZKSCAN3Q9BRR0 538 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 UBA5Q9GZZ9 404 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 TOMM22Q9NS69 142 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 ZBTB47Q9UFB7 747 aaPredicted RBP12.8□□□□□ -0.36
TMX3-210ENST00000569053 NEDD4P46934 1319 aa12.8□□□□□ -0.36
TMX3-210ENST00000569053 IQCF3P0C7M6 154 aa12.79□□□□□ -0.36
TMX3-210ENST00000569053 MRPS5P82675 430 aaKnown RBP12.79□□□□□ -0.36
TMX3-210ENST00000569053 MCMDC2Q4G0Z9 681 aa12.79□□□□□ -0.36
TMX3-210ENST00000569053 CCDC62Q6P9F0 684 aa12.79□□□□□ -0.36
TMX3-210ENST00000569053 RPUSD2Q8IZ73 545 aaKnown RBP12.79□□□□□ -0.36
TMX3-210ENST00000569053 MICALL1Q8N3F8 863 aa12.79□□□□□ -0.36
TMX3-210ENST00000569053 DHX38Q92620 1227 aaKnown RBP12.79□□□□□ -0.36
TMX3-210ENST00000569053 KAT2BQ92831 832 aa12.79□□□□□ -0.36
TMX3-210ENST00000569053 MTG1Q9BT17 334 aaPredicted RBP12.79□□□□□ -0.36
TMX3-210ENST00000569053 POLR3EQ9NVU0 708 aa12.79□□□□□ -0.36
TMX3-210ENST00000569053 ADD3Q9UEY8 706 aaKnown RBP12.79□□□□□ -0.36
TMX3-210ENST00000569053 MTCH2Q9Y6C9 303 aa12.79□□□□□ -0.36
TMX3-210ENST00000569053 KIAA1217Q5T5P2 1943 aa12.78□□□□□ -0.36
TMX3-210ENST00000569053 LCHNA4D1U4 455 aa12.78□□□□□ -0.36
TMX3-210ENST00000569053 TAP1Q03518 808 aa12.78□□□□□ -0.36
TMX3-210ENST00000569053 USH1GQ495M9 461 aa12.78□□□□□ -0.36
TMX3-210ENST00000569053 FAM47CQ5HY64 1035 aa12.78□□□□□ -0.36
TMX3-210ENST00000569053 TAAR1Q96RJ0 339 aa12.78□□□□□ -0.36
TMX3-210ENST00000569053 UHRF1Q96T88 793 aaPredicted RBP12.78□□□□□ -0.36
TMX3-210ENST00000569053 SEZ6LQ9BYH1 1024 aa12.78□□□□□ -0.36
TMX3-210ENST00000569053 COL4A4P53420 1690 aaPredicted RBP12.77□□□□□ -0.36
TMX3-210ENST00000569053 LPXNO60711 386 aa12.77□□□□□ -0.37
TMX3-210ENST00000569053 TXNP10599 105 aaKnown RBP12.77□□□□□ -0.37
TMX3-210ENST00000569053 POU3F3P20264 500 aaPredicted RBP12.77□□□□□ -0.37
TMX3-210ENST00000569053 CPT1AP50416 773 aa12.77□□□□□ -0.37
TMX3-210ENST00000569053 ARHGAP1Q07960 439 aa12.77□□□□□ -0.37
TMX3-210ENST00000569053 PDE4DQ08499 809 aa12.77□□□□□ -0.37
TMX3-210ENST00000569053 HIC1Q14526 733 aa12.77□□□□□ -0.37
TMX3-210ENST00000569053 LY6KQ17RY6 165 aa12.77□□□□□ -0.37
TMX3-210ENST00000569053 PPP4R3BQ5MIZ7 849 aa12.77□□□□□ -0.37
TMX3-210ENST00000569053 GDF6Q6KF10 455 aaPredicted RBP12.77□□□□□ -0.37
TMX3-210ENST00000569053 AFG1LQ8WV93 481 aa12.77□□□□□ -0.37
TMX3-210ENST00000569053 WNT8BQ93098 351 aa12.77□□□□□ -0.37
TMX3-210ENST00000569053 MTIF3Q9H2K0 278 aaKnown RBP12.77□□□□□ -0.37
TMX3-210ENST00000569053 BDP1A6H8Y1 2624 aa12.77□□□□□ -0.37
TMX3-210ENST00000569053 WDR19Q8NEZ3 1342 aa12.77□□□□□ -0.37
TMX3-210ENST00000569053 LAMA4Q16363 1823 aa12.76□□□□□ -0.37
TMX3-210ENST00000569053 MYH7BA7E2Y1 1941 aa12.76□□□□□ -0.37
TMX3-210ENST00000569053 LOC102724159A0A0B4J2E5 919 aa12.76□□□□□ -0.37
TMX3-210ENST00000569053 OPLAHO14841 1288 aa12.76□□□□□ -0.37
TMX3-210ENST00000569053 RRP1P56182 461 aaKnown RBP12.76□□□□□ -0.37
TMX3-210ENST00000569053 PPP2R5BQ15173 497 aa12.76□□□□□ -0.37
TMX3-210ENST00000569053 PWP2Q15269 919 aaKnown RBP12.76□□□□□ -0.37
TMX3-210ENST00000569053 TMEM67Q5HYA8 995 aa12.76□□□□□ -0.37
TMX3-210ENST00000569053 NFRKBQ6P4R8 1299 aa12.76□□□□□ -0.37
TMX3-210ENST00000569053 TRAF7Q6Q0C0 670 aa12.76□□□□□ -0.37
TMX3-210ENST00000569053 HERC6Q8IVU3 1022 aa12.76□□□□□ -0.37
TMX3-210ENST00000569053 SYTL5Q8TDW5 730 aaPredicted RBP12.76□□□□□ -0.37
TMX3-210ENST00000569053 KHSRPQ92945 711 aaKnown RBP eCLIP12.76□□□□□ -0.375e-6■■■□□ 19.1
TMX3-210ENST00000569053 IL25Q9H293 177 aa12.76□□□□□ -0.37
TMX3-210ENST00000569053 ZMYM6O95789 1325 aa12.76□□□□□ -0.37
TMX3-210ENST00000569053 CCDC171Q6TFL3 1326 aa12.76□□□□□ -0.37
TMX3-210ENST00000569053 PFKMP08237 780 aa12.75□□□□□ -0.37
TMX3-210ENST00000569053 MMP3P08254 477 aa12.75□□□□□ -0.37
TMX3-210ENST00000569053 SUPT20HL2P0C7V6 817 aa12.75□□□□□ -0.37
TMX3-210ENST00000569053 MYH6P13533 1939 aa12.75□□□□□ -0.37
TMX3-210ENST00000569053 CHMP4BP1P59074 171 aa12.75□□□□□ -0.37
TMX3-210ENST00000569053 DEFB103AP81534 67 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms