RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	ALG3	Q92685	438 aa		4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	FBXL7	Q9UJT9	491 aa		4.96	□□□□□ -1.62
BBS4-215	ENST00000569001	IRS2	Q9Y4H2	1338 aa		4.96	□□□□□ -1.62
BBS4-215	ENST00000569001		A0A0G2JLL6	359 aa	Predicted RBP	4.95	□□□□□ -1.62
BBS4-215	ENST00000569001	FFAR3	O14843	346 aa		4.95	□□□□□ -1.62
BBS4-215	ENST00000569001	SNRPB2	P08579	225 aa	Known RBP	4.95	□□□□□ -1.62
BBS4-215	ENST00000569001	GRIA2	P42262	883 aa		4.95	□□□□□ -1.62
BBS4-215	ENST00000569001	ARID5A	Q03989	594 aa		4.95	□□□□□ -1.62
BBS4-215	ENST00000569001	MARCH10	Q8NA82	808 aa	Predicted RBP	4.95	□□□□□ -1.62
BBS4-215	ENST00000569001	TP53I13	Q8NBR0	393 aa	Predicted RBP	4.95	□□□□□ -1.62
BBS4-215	ENST00000569001	NPLOC4	Q8TAT6	608 aa		4.95	□□□□□ -1.62
BBS4-215	ENST00000569001	KCNC2	Q96PR1	638 aa		4.95	□□□□□ -1.62
BBS4-215	ENST00000569001	KRTAP4-7	Q9BYR0	210 aa		4.95	□□□□□ -1.62
BBS4-215	ENST00000569001	NKX2-4	Q9H2Z4	354 aa		4.95	□□□□□ -1.62
BBS4-215	ENST00000569001	PARD6A	Q9NPB6	346 aa		4.95	□□□□□ -1.62
BBS4-215	ENST00000569001	OTOL1	A6NHN0	477 aa	Predicted RBP	4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	NPHS1	O60500	1241 aa		4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	LCP1	P13796	627 aa		4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	KCNJ6	P48051	423 aa		4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	FOXO4	P98177	505 aa		4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	GNL2	Q13823	731 aa	Known RBP	4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	TNNI3K	Q59H18	835 aa		4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	WWC2	Q6AWC2	1192 aa		4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	DENND5A	Q6IQ26	1287 aa		4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	POMZP3	Q6PJE2	187 aa		4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	CABP7	Q86V35	215 aa		4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	PLEKHO2	Q8TD55	490 aa		4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	NOX5	Q96PH1	765 aa		4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	CYP26B1	Q9NR63	512 aa		4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	PODXL2	Q9NZ53	605 aa		4.94	□□□□□ -1.62
BBS4-215	ENST00000569001	C22orf46	C9J442	243 aa		4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	NAT2	P11245	290 aa		4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	PFKL	P17858	780 aa		4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	CTSW	P56202	376 aa		4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	FXN	Q16595	210 aa		4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	SLC10A6	Q3KNW5	377 aa		4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	ANKS3	Q6ZW76	656 aa		4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	NLRP10	Q86W26	655 aa		4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	TMEM151B	Q8IW70	566 aa		4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	FAM26E	Q8N5C1	309 aa		4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	TMEM145	Q8NBT3	493 aa		4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	ZNF526	Q8TF50	670 aa	Predicted RBP	4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	ADAM7	Q9H2U9	754 aa		4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	FAN1	Q9Y2M0	1017 aa		4.93	□□□□□ -1.62
BBS4-215	ENST00000569001	BCL6	P41182	706 aa		4.92	□□□□□ -1.62
BBS4-215	ENST00000569001	ZNF143	P52747	638 aa	Predicted RBP	4.92	□□□□□ -1.62
BBS4-215	ENST00000569001	TARBP2	Q15633	366 aa	Known RBP	4.92	□□□□□ -1.62
BBS4-215	ENST00000569001	VWA3B	Q502W6	1294 aa		4.92	□□□□□ -1.62
BBS4-215	ENST00000569001	STK32C	Q86UX6	486 aa		4.92	□□□□□ -1.62
BBS4-215	ENST00000569001	KREMEN2	Q8NCW0	462 aa		4.92	□□□□□ -1.62
BBS4-215	ENST00000569001	SMARCC2	Q8TAQ2	1214 aa		4.92	□□□□□ -1.62
BBS4-215	ENST00000569001	FNIP1	Q8TF40	1166 aa		4.92	□□□□□ -1.62
BBS4-215	ENST00000569001	DDX11	Q96FC9	970 aa		4.92	□□□□□ -1.62
BBS4-215	ENST00000569001	MMP19	Q99542	508 aa		4.92	□□□□□ -1.62
BBS4-215	ENST00000569001	XYLT2	Q9H1B5	865 aa		4.92	□□□□□ -1.62
BBS4-215	ENST00000569001	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	4.92	□□□□□ -1.62
BBS4-215	ENST00000569001	PMF1-BGLAP	U3KQ54	211 aa		4.92	□□□□□ -1.62
BBS4-215	ENST00000569001	TRBV23OR9-2	A0A075B6M9	112 aa		4.91	□□□□□ -1.62
BBS4-215	ENST00000569001	SGSM2	O43147	1006 aa		4.91	□□□□□ -1.62
BBS4-215	ENST00000569001	NCAM1	P13591	858 aa		4.91	□□□□□ -1.62
BBS4-215	ENST00000569001	PPP2R2A	P63151	447 aa		4.91	□□□□□ -1.62
BBS4-215	ENST00000569001	SMAD4	Q13485	552 aa	Known RBP	4.91	□□□□□ -1.62
BBS4-215	ENST00000569001	CEP68	Q76N32	757 aa		4.91	□□□□□ -1.62
BBS4-215	ENST00000569001	PPIL6	Q8IXY8	311 aa		4.91	□□□□□ -1.62
BBS4-215	ENST00000569001	NETO2	Q8NC67	525 aa		4.91	□□□□□ -1.62
BBS4-215	ENST00000569001	RCBTB1	Q8NDN9	531 aa		4.91	□□□□□ -1.62
BBS4-215	ENST00000569001	DIO2	Q92813	273 aa		4.91	□□□□□ -1.62
BBS4-215	ENST00000569001	TSPAN17	Q96FV3	270 aa		4.91	□□□□□ -1.62
BBS4-215	ENST00000569001	PEX11G	Q96HA9	241 aa		4.91	□□□□□ -1.62
BBS4-215	ENST00000569001	IGSF5	Q9NSI5	407 aa		4.91	□□□□□ -1.62
BBS4-215	ENST00000569001	PCDHA2	Q9Y5H9	948 aa		4.91	□□□□□ -1.62
BBS4-215	ENST00000569001		A0A1W2PQU0	124 aa		4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	MEFV	O15553	781 aa	Predicted RBP	4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	C8B	P07358	591 aa		4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	STAT5A	P42229	794 aa		4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	GFRA1	P56159	465 aa		4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	DLX2	Q07687	328 aa	Predicted RBP	4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	DDR2	Q16832	855 aa		4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	EEPD1	Q7L9B9	569 aa		4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	LINC01356	Q8N9X3	169 aa		4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	C1orf159	Q96HA4	380 aa		4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	SPATA25	Q9BR10	227 aa		4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	NUDT5	Q9UKK9	219 aa		4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	R3HCC1	Q9Y3T6	440 aa	Known RBP	4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	TIMM13	Q9Y5L4	95 aa	Predicted RBP	4.9	□□□□□ -1.63
BBS4-215	ENST00000569001	BLACE	A4D250	179 aa		4.89	□□□□□ -1.63
BBS4-215	ENST00000569001	KLF4	O43474	513 aa		4.89	□□□□□ -1.63
BBS4-215	ENST00000569001	HOXC12	P31275	282 aa		4.89	□□□□□ -1.63
BBS4-215	ENST00000569001	BUD31	P41223	144 aa	Predicted RBP	4.89	□□□□□ -1.63
BBS4-215	ENST00000569001	SLURP1	P55000	103 aa		4.89	□□□□□ -1.63
BBS4-215	ENST00000569001	RPL11	P62913	178 aa	Known RBP	4.89	□□□□□ -1.63
BBS4-215	ENST00000569001	HTRA3	P83110	453 aa		4.89	□□□□□ -1.63
BBS4-215	ENST00000569001	B3GNT8	Q7Z7M8	397 aa		4.89	□□□□□ -1.63
BBS4-215	ENST00000569001	TRMT2B	Q96GJ1	504 aa	Known RBP	4.89	□□□□□ -1.63
BBS4-215	ENST00000569001	CHAMP1	Q96JM3	812 aa		4.89	□□□□□ -1.63
BBS4-215	ENST00000569001	IER2	Q9BTL4	223 aa		4.89	□□□□□ -1.63
BBS4-215	ENST00000569001	RNF38	Q9H0F5	515 aa		4.89	□□□□□ -1.63
BBS4-215	ENST00000569001	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.89	□□□□□ -1.63
BBS4-215	ENST00000569001	PALD1	Q9ULE6	856 aa		4.89	□□□□□ -1.63

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