RNA–Protein interactions for RNA: ENST00000568900.5

SPNS1-212, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 2

Gene SPNS1, Length 2,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-212ENST00000568900 GCOM1H8Y6P7 765 aaPredicted RBP23.53■■□□□ 1.36
SPNS1-212ENST00000568900 FLOT1O75955 427 aa23.53■■□□□ 1.36
SPNS1-212ENST00000568900 POLR2MP0CAP2 368 aa23.53■■□□□ 1.36
SPNS1-212ENST00000568900 PDIA5Q14554 519 aa23.53■■□□□ 1.36
SPNS1-212ENST00000568900 CALML4Q96GE6 196 aa23.53■■□□□ 1.36
SPNS1-212ENST00000568900 RPAP3Q9H6T3 665 aaPredicted RBP23.53■■□□□ 1.36
SPNS1-212ENST00000568900 PHIPQ8WWQ0 1821 aa23.52■■□□□ 1.36
SPNS1-212ENST00000568900 ICAM1P05362 532 aa23.52■■□□□ 1.36
SPNS1-212ENST00000568900 MOXD1Q6UVY6 613 aa23.52■■□□□ 1.36
SPNS1-212ENST00000568900 DCPSQ96C86 337 aaKnown RBP23.52■■□□□ 1.36
SPNS1-212ENST00000568900 MBOAT7Q96N66 472 aa23.52■■□□□ 1.36
SPNS1-212ENST00000568900 ZNF536O15090 1300 aa23.52■■□□□ 1.36
SPNS1-212ENST00000568900 ESPNB1AK53 854 aa23.52■■□□□ 1.36
SPNS1-212ENST00000568900 PCDHA12Q9UN75 941 aa23.52■■□□□ 1.36
SPNS1-212ENST00000568900 ADM5C9JUS6 153 aa23.51■■□□□ 1.35
SPNS1-212ENST00000568900 PRR16Q569H4 304 aa23.51■■□□□ 1.35
SPNS1-212ENST00000568900 CUEDC2Q9H467 287 aa23.51■■□□□ 1.35
SPNS1-212ENST00000568900 SULF1Q8IWU6 871 aa23.5■■□□□ 1.35
SPNS1-212ENST00000568900 DRC7Q8IY82 874 aa23.5■■□□□ 1.35
SPNS1-212ENST00000568900 CPXCR1Q8N123 301 aa23.5■■□□□ 1.35
SPNS1-212ENST00000568900 KCNMB3Q9NPA1 279 aa23.5■■□□□ 1.35
SPNS1-212ENST00000568900 KBTBD4Q9NVX7 518 aa23.5■■□□□ 1.35
SPNS1-212ENST00000568900 TEX2Q8IWB9 1127 aa23.5■■□□□ 1.35
SPNS1-212ENST00000568900 SNX29Q8TEQ0 813 aa23.5■■□□□ 1.35
SPNS1-212ENST00000568900 PPP1R9AQ9ULJ8 1098 aa23.5■■□□□ 1.35
SPNS1-212ENST00000568900 FAM86B1E9PN63 330 aa23.49■■□□□ 1.35
SPNS1-212ENST00000568900 RPN1P04843 607 aaKnown RBP23.49■■□□□ 1.35
SPNS1-212ENST00000568900 FAM86B2P0C5J1 330 aa23.49■■□□□ 1.35
SPNS1-212ENST00000568900 HMGCS2P54868 508 aa23.49■■□□□ 1.35
SPNS1-212ENST00000568900 FMR1Q06787 632 aaKnown RBP eCLIP23.49■■□□□ 1.35
SPNS1-212ENST00000568900 KRT79Q5XKE5 535 aa23.49■■□□□ 1.35
SPNS1-212ENST00000568900 DPY19L2Q6NUT2 758 aa23.49■■□□□ 1.35
SPNS1-212ENST00000568900 SMYD4Q8IYR2 804 aaPredicted RBP23.49■■□□□ 1.35
SPNS1-212ENST00000568900 CDK5RAP3Q96JB5 506 aa23.49■■□□□ 1.35
SPNS1-212ENST00000568900 HSD3B7Q9H2F3 369 aa23.49■■□□□ 1.35
SPNS1-212ENST00000568900 SLC38A10Q9HBR0 1119 aa23.49■■□□□ 1.35
SPNS1-212ENST00000568900 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.49■■□□□ 1.35
SPNS1-212ENST00000568900 PARP14Q460N5 1801 aa23.49■■□□□ 1.35
SPNS1-212ENST00000568900 USP2O75604 605 aaPredicted RBP23.49■■□□□ 1.35
SPNS1-212ENST00000568900 GRB10Q13322 594 aa23.49■■□□□ 1.35
SPNS1-212ENST00000568900 ILDR2Q71H61 639 aa23.49■■□□□ 1.35
SPNS1-212ENST00000568900 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.49■■□□□ 1.35
SPNS1-212ENST00000568900 ZSCAN30Q86W11 494 aa23.49■■□□□ 1.35
SPNS1-212ENST00000568900 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.49■■□□□ 1.35
SPNS1-212ENST00000568900 MAGEF1Q9HAY2 307 aa23.49■■□□□ 1.35
SPNS1-212ENST00000568900 RAVER2Q9HCJ3 691 aaKnown RBP23.49■■□□□ 1.35
SPNS1-212ENST00000568900 ZNF76P36508 570 aa23.48■■□□□ 1.35
SPNS1-212ENST00000568900 Q4G0T1 1027 aa23.48■■□□□ 1.35
SPNS1-212ENST00000568900 NOL9Q5SY16 702 aaKnown RBP23.48■■□□□ 1.35
SPNS1-212ENST00000568900 TRMT44Q8IYL2 757 aaKnown RBP23.48■■□□□ 1.35
SPNS1-212ENST00000568900 PNMA5Q96PV4 448 aa23.48■■□□□ 1.35
SPNS1-212ENST00000568900 NUDT12Q9BQG2 462 aa23.48■■□□□ 1.35
SPNS1-212ENST00000568900 CD44P16070 742 aaKnown RBP23.48■■□□□ 1.35
SPNS1-212ENST00000568900 SLFN12Q8IYM2 578 aa23.48■■□□□ 1.35
SPNS1-212ENST00000568900 LENG9Q96B70 501 aa23.48■■□□□ 1.35
SPNS1-212ENST00000568900 MRFAP1L1Q96HT8 127 aa23.48■■□□□ 1.35
SPNS1-212ENST00000568900 RMND1Q9NWS8 449 aa23.48■■□□□ 1.35
SPNS1-212ENST00000568900 CTDP1Q9Y5B0 961 aaPredicted RBP23.48■■□□□ 1.35
SPNS1-212ENST00000568900 CYP3A4P08684 503 aa23.47■■□□□ 1.35
SPNS1-212ENST00000568900 CIITAP33076 1130 aa23.47■■□□□ 1.35
SPNS1-212ENST00000568900 GPR162Q16538 588 aa23.47■■□□□ 1.35
SPNS1-212ENST00000568900 KLHL10Q6JEL2 608 aa23.47■■□□□ 1.35
SPNS1-212ENST00000568900 FAM43AQ8N2R8 423 aa23.47■■□□□ 1.35
SPNS1-212ENST00000568900 ETNPPLQ8TBG4 499 aa23.47■■□□□ 1.35
SPNS1-212ENST00000568900 RRAGDQ9NQL2 400 aaPredicted RBP23.47■■□□□ 1.35
SPNS1-212ENST00000568900 FANCLQ9NW38 375 aa23.47■■□□□ 1.35
SPNS1-212ENST00000568900 GOLGA6L6A8MZA4 724 aa23.47■■□□□ 1.35
SPNS1-212ENST00000568900 MYL1P05976 194 aa23.47■■□□□ 1.35
SPNS1-212ENST00000568900 ALAS1P13196 640 aa23.47■■□□□ 1.35
SPNS1-212ENST00000568900 ATP1A3P13637 1013 aa23.47■■□□□ 1.35
SPNS1-212ENST00000568900 DHX8Q14562 1220 aaKnown RBP23.47■■□□□ 1.35
SPNS1-212ENST00000568900 CYP2W1Q8TAV3 490 aa23.47■■□□□ 1.35
SPNS1-212ENST00000568900 CDC25BP30305 580 aa23.46■■□□□ 1.35
SPNS1-212ENST00000568900 UBXN2AP68543 259 aa23.46■■□□□ 1.35
SPNS1-212ENST00000568900 KRT26Q7Z3Y9 468 aa23.46■■□□□ 1.35
SPNS1-212ENST00000568900 HOMER2Q9NSB8 354 aa23.46■■□□□ 1.35
SPNS1-212ENST00000568900 C19orf81C9J6K1 198 aa23.45■■□□□ 1.35
SPNS1-212ENST00000568900 NFIBO00712 420 aa23.45■■□□□ 1.35
SPNS1-212ENST00000568900 ZBED4O75132 1171 aa23.45■■□□□ 1.35
SPNS1-212ENST00000568900 ERCC5P28715 1186 aaPredicted RBP23.45■■□□□ 1.35
SPNS1-212ENST00000568900 ENOX1Q8TC92 643 aaKnown RBP23.45■■□□□ 1.35
SPNS1-212ENST00000568900 CLEC4DQ8WXI8 215 aa23.45■■□□□ 1.35
SPNS1-212ENST00000568900 ATG4CQ96DT6 458 aa23.45■■□□□ 1.35
SPNS1-212ENST00000568900 C12orf42Q96LP6 360 aa23.45■■□□□ 1.35
SPNS1-212ENST00000568900 ZNF830Q96NB3 372 aaPredicted RBP23.45■■□□□ 1.35
SPNS1-212ENST00000568900 EHMT1Q9H9B1 1298 aa23.45■■□□□ 1.35
SPNS1-212ENST00000568900 BLOC1S4Q9NUP1 217 aa23.45■■□□□ 1.35
SPNS1-212ENST00000568900 PPP1R3GB7ZBB8 358 aa23.45■■□□□ 1.34
SPNS1-212ENST00000568900 TBX3O15119 743 aa23.45■■□□□ 1.34
SPNS1-212ENST00000568900 VGLL4Q14135 290 aa23.45■■□□□ 1.34
SPNS1-212ENST00000568900 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.45■■□□□ 1.34
SPNS1-212ENST00000568900 MED15Q96RN5 788 aa23.45■■□□□ 1.34
SPNS1-212ENST00000568900 RTN4Q9NQC3 1192 aaKnown RBP23.45■■□□□ 1.34
SPNS1-212ENST00000568900 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.45■■□□□ 1.34
SPNS1-212ENST00000568900 IFNKQ9P0W0 207 aa23.45■■□□□ 1.34
SPNS1-212ENST00000568900 STK17AQ9UEE5 414 aa23.45■■□□□ 1.34
SPNS1-212ENST00000568900 ZKSCAN5Q9Y2L8 839 aa23.45■■□□□ 1.34
SPNS1-212ENST00000568900 NFE2L3Q9Y4A8 694 aa23.45■■□□□ 1.34
SPNS1-212ENST00000568900 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.45■■□□□ 1.34
SPNS1-212ENST00000568900 STAT3P40763 770 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms