RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ADAMTS3O15072 1205 aa19.19■□□□□ 0.66
COMMD4-224ENST00000568877 FOSP01100 380 aaPredicted RBP19.19■□□□□ 0.66
COMMD4-224ENST00000568877 BECN1Q14457 450 aa19.19■□□□□ 0.66
COMMD4-224ENST00000568877 PWP2Q15269 919 aaKnown RBP19.19■□□□□ 0.66
COMMD4-224ENST00000568877 NPY5RQ15761 445 aa19.19■□□□□ 0.66
COMMD4-224ENST00000568877 ARHGEF16Q5VV41 709 aa19.19■□□□□ 0.66
COMMD4-224ENST00000568877 REXO1Q8N1G1 1221 aaKnown RBP19.19■□□□□ 0.66
COMMD4-224ENST00000568877 DAGLBQ8NCG7 672 aa19.19■□□□□ 0.66
COMMD4-224ENST00000568877 MPHOSPH6Q99547 160 aaKnown RBP19.19■□□□□ 0.66
COMMD4-224ENST00000568877 PXMP2Q9NR77 195 aa19.19■□□□□ 0.66
COMMD4-224ENST00000568877 TMEM260Q9NX78 707 aa19.19■□□□□ 0.66
COMMD4-224ENST00000568877 PCDHA6Q9UN73 950 aa19.19■□□□□ 0.66
COMMD4-224ENST00000568877 PCDHA8Q9Y5H6 950 aa19.19■□□□□ 0.66
COMMD4-224ENST00000568877 B4DLN1 442 aa19.18■□□□□ 0.66
COMMD4-224ENST00000568877 HMGCRP04035 888 aa19.18■□□□□ 0.66
COMMD4-224ENST00000568877 EIF2AK2P19525 551 aaKnown RBP19.18■□□□□ 0.66
COMMD4-224ENST00000568877 AP3B2Q13367 1082 aa19.18■□□□□ 0.66
COMMD4-224ENST00000568877 SLC9C1Q4G0N8 1177 aa19.18■□□□□ 0.66
COMMD4-224ENST00000568877 JAKMIP3Q5VZ66 844 aa19.18■□□□□ 0.66
COMMD4-224ENST00000568877 MFSD14CQ5VZR4 134 aa19.18■□□□□ 0.66
COMMD4-224ENST00000568877 KRT40Q6A162 431 aa19.18■□□□□ 0.66
COMMD4-224ENST00000568877 MCTP2Q6DN12 878 aa19.18■□□□□ 0.66
COMMD4-224ENST00000568877 BLIDQ8IZY5 108 aa19.18■□□□□ 0.66
COMMD4-224ENST00000568877 IWS1Q96ST2 819 aa19.18■□□□□ 0.66
COMMD4-224ENST00000568877 MCOLN1Q9GZU1 580 aa19.18■□□□□ 0.66
COMMD4-224ENST00000568877 FOXD4L1Q9NU39 408 aa19.18■□□□□ 0.66
COMMD4-224ENST00000568877 SYNGAP1Q96PV0 1343 aa19.18■□□□□ 0.66
COMMD4-224ENST00000568877 MMP1P03956 469 aa19.17■□□□□ 0.66
COMMD4-224ENST00000568877 HSP90AA1P07900 732 aaKnown RBP19.17■□□□□ 0.66
COMMD4-224ENST00000568877 EDNRBP24530 442 aa19.17■□□□□ 0.66
COMMD4-224ENST00000568877 CYP2C19P33261 490 aa19.17■□□□□ 0.66
COMMD4-224ENST00000568877 GUCY1B3Q02153 619 aa19.17■□□□□ 0.66
COMMD4-224ENST00000568877 ARMCX2Q7L311 632 aa19.17■□□□□ 0.66
COMMD4-224ENST00000568877 FBXO18Q8NFZ0 1043 aa19.17■□□□□ 0.66
COMMD4-224ENST00000568877 MORC4Q8TE76 937 aa19.17■□□□□ 0.66
COMMD4-224ENST00000568877 SH3TC2Q8TF17 1288 aa19.17■□□□□ 0.66
COMMD4-224ENST00000568877 PDCD2LQ9BRP1 358 aa19.17■□□□□ 0.66
COMMD4-224ENST00000568877 FRMPD4Q14CM0 1322 aa19.17■□□□□ 0.66
COMMD4-224ENST00000568877 RPTORQ8N122 1335 aa19.17■□□□□ 0.66
COMMD4-224ENST00000568877 LCTP09848 1927 aa19.16■□□□□ 0.66
COMMD4-224ENST00000568877 M0R2N6 131 aa19.16■□□□□ 0.66
COMMD4-224ENST00000568877 SNAI1O95863 264 aaPredicted RBP19.16■□□□□ 0.66
COMMD4-224ENST00000568877 INHAP05111 366 aa19.16■□□□□ 0.66
COMMD4-224ENST00000568877 PDE4DQ08499 809 aa19.16■□□□□ 0.66
COMMD4-224ENST00000568877 TRIM32Q13049 653 aa19.16■□□□□ 0.66
COMMD4-224ENST00000568877 RASGRP4Q8TDF6 673 aa19.16■□□□□ 0.66
COMMD4-224ENST00000568877 PGBD1Q96JS3 809 aa19.16■□□□□ 0.66
COMMD4-224ENST00000568877 ANO3Q9BYT9 981 aa19.16■□□□□ 0.66
COMMD4-224ENST00000568877 EHMT1Q9H9B1 1298 aa19.16■□□□□ 0.66
COMMD4-224ENST00000568877 BRMS1Q9HCU9 246 aa19.16■□□□□ 0.66
COMMD4-224ENST00000568877 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.16■□□□□ 0.66
COMMD4-224ENST00000568877 DDX49Q9Y6V7 483 aaKnown RBP19.16■□□□□ 0.66
COMMD4-224ENST00000568877 PLXNA1Q9UIW2 1896 aa19.16■□□□□ 0.66
COMMD4-224ENST00000568877 NR3C2P08235 984 aa19.15■□□□□ 0.66
COMMD4-224ENST00000568877 KRT2P35908 639 aa19.15■□□□□ 0.66
COMMD4-224ENST00000568877 UBXN2AP68543 259 aa19.15■□□□□ 0.66
COMMD4-224ENST00000568877 CACNB2Q08289 660 aaPredicted RBP19.15■□□□□ 0.66
COMMD4-224ENST00000568877 PGM5Q15124 567 aa19.15■□□□□ 0.66
COMMD4-224ENST00000568877 SAFBQ15424 915 aaKnown RBP eCLIP19.15■□□□□ 0.66
COMMD4-224ENST00000568877 STXBP2Q15833 593 aa19.15■□□□□ 0.66
COMMD4-224ENST00000568877 COL13A1Q5TAT6 717 aaPredicted RBP19.15■□□□□ 0.66
COMMD4-224ENST00000568877 LARP1BQ659C4 914 aaKnown RBP19.15■□□□□ 0.66
COMMD4-224ENST00000568877 OXER1Q8TDS5 423 aa19.15■□□□□ 0.66
COMMD4-224ENST00000568877 CNPY2Q9Y2B0 182 aa19.15■□□□□ 0.66
COMMD4-224ENST00000568877 HTTP42858 3142 aa19.14■□□□□ 0.66
COMMD4-224ENST00000568877 MYCLP12524 364 aaPredicted RBP19.14■□□□□ 0.65
COMMD4-224ENST00000568877 PRKAR2AP13861 404 aaKnown RBP19.14■□□□□ 0.65
COMMD4-224ENST00000568877 PRAMEF19Q5SWL8 479 aa19.14■□□□□ 0.65
COMMD4-224ENST00000568877 MAP3K21Q5TCX8 1036 aa19.14■□□□□ 0.65
COMMD4-224ENST00000568877 VSIG10LQ86VR7 867 aa19.14■□□□□ 0.65
COMMD4-224ENST00000568877 DIS3L2Q8IYB7 885 aaKnown RBP19.14■□□□□ 0.65
COMMD4-224ENST00000568877 IL31RAQ8NI17 732 aa19.14■□□□□ 0.65
COMMD4-224ENST00000568877 ABHD16BQ9H3Z7 469 aa19.14■□□□□ 0.65
COMMD4-224ENST00000568877 NRBP1Q9UHY1 535 aa19.14■□□□□ 0.65
COMMD4-224ENST00000568877 BTBD18B2RXH4 712 aa19.13■□□□□ 0.65
COMMD4-224ENST00000568877 H3BQV1 296 aa19.13■□□□□ 0.65
COMMD4-224ENST00000568877 EIF3JO75822 258 aaKnown RBP19.13■□□□□ 0.65
COMMD4-224ENST00000568877 PDCP20941 246 aa19.13■□□□□ 0.65
COMMD4-224ENST00000568877 CCND2P30279 289 aa19.13■□□□□ 0.65
COMMD4-224ENST00000568877 SREBF1P36956 1147 aa19.13■□□□□ 0.65
COMMD4-224ENST00000568877 ACVR2BQ13705 512 aa19.13■□□□□ 0.65
COMMD4-224ENST00000568877 IFFO2Q5TF58 517 aa19.13■□□□□ 0.65
COMMD4-224ENST00000568877 PCNX4Q63HM2 1172 aa19.13■□□□□ 0.65
COMMD4-224ENST00000568877 XRRA1Q6P2D8 792 aa19.13■□□□□ 0.65
COMMD4-224ENST00000568877 SPRYD3Q8NCJ5 442 aa19.13■□□□□ 0.65
COMMD4-224ENST00000568877 ARMC5Q96C12 935 aa19.13■□□□□ 0.65
COMMD4-224ENST00000568877 KATNBL1Q9H079 304 aa19.13■□□□□ 0.65
COMMD4-224ENST00000568877 ZNF865P0CJ78 1059 aaPredicted RBP19.12■□□□□ 0.65
COMMD4-224ENST00000568877 CYBAP13498 195 aa19.12■□□□□ 0.65
COMMD4-224ENST00000568877 ANP32AP39687 249 aaKnown RBP19.12■□□□□ 0.65
COMMD4-224ENST00000568877 NR5A1Q13285 461 aa19.12■□□□□ 0.65
COMMD4-224ENST00000568877 EEPD1Q7L9B9 569 aa19.12■□□□□ 0.65
COMMD4-224ENST00000568877 KRT25Q7Z3Z0 450 aa19.12■□□□□ 0.65
COMMD4-224ENST00000568877 FBXO16Q8IX29 292 aaPredicted RBP19.12■□□□□ 0.65
COMMD4-224ENST00000568877 TRPV1Q8NER1 839 aa19.12■□□□□ 0.65
COMMD4-224ENST00000568877 TNFRSF25Q93038 417 aa19.12■□□□□ 0.65
COMMD4-224ENST00000568877 VTA1Q9NP79 307 aa19.12■□□□□ 0.65
COMMD4-224ENST00000568877 TSHZ2Q9NRE2 1034 aa19.12■□□□□ 0.65
COMMD4-224ENST00000568877 ZHX1Q9UKY1 873 aaPredicted RBP19.12■□□□□ 0.65
COMMD4-224ENST00000568877 CCDC194A0A1B0GVG4 234 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms