RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 PPP2R5BQ15173 497 aa17.53■□□□□ 0.4
USB1-214ENST00000568848 FAM117BQ6P1L5 589 aa17.53■□□□□ 0.4
USB1-214ENST00000568848 RNF207Q6ZRF8 634 aa17.53■□□□□ 0.4
USB1-214ENST00000568848 CHST3Q7LGC8 479 aa17.53■□□□□ 0.4
USB1-214ENST00000568848 DCAF4Q8WV16 495 aa17.53■□□□□ 0.4
USB1-214ENST00000568848 DHX38Q92620 1227 aaKnown RBP17.53■□□□□ 0.4
USB1-214ENST00000568848 FAM122AQ96E09 287 aa17.53■□□□□ 0.4
USB1-214ENST00000568848 ZKSCAN3Q9BRR0 538 aa17.53■□□□□ 0.4
USB1-214ENST00000568848 GPHNQ9NQX3 736 aaPredicted RBP17.53■□□□□ 0.4
USB1-214ENST00000568848 A0A0D9SFI3 127 aa17.52■□□□□ 0.4
USB1-214ENST00000568848 GTPBP6O43824 516 aaPredicted RBP17.52■□□□□ 0.4
USB1-214ENST00000568848 NOVP48745 357 aa17.52■□□□□ 0.4
USB1-214ENST00000568848 CPT1AP50416 773 aa17.52■□□□□ 0.4
USB1-214ENST00000568848 GDF6Q6KF10 455 aaPredicted RBP17.52■□□□□ 0.4
USB1-214ENST00000568848 AFG1LQ8WV93 481 aa17.52■□□□□ 0.4
USB1-214ENST00000568848 LRFN3Q9BTN0 628 aa17.52■□□□□ 0.4
USB1-214ENST00000568848 TSPYL2Q9H2G4 693 aaPredicted RBP17.52■□□□□ 0.4
USB1-214ENST00000568848 COL20A1Q9P218 1284 aa17.52■□□□□ 0.4
USB1-214ENST00000568848 TTC41PQ6P2S7 1318 aa17.51■□□□□ 0.39
USB1-214ENST00000568848 TLL1O43897 1013 aa17.51■□□□□ 0.39
USB1-214ENST00000568848 TXNP10599 105 aaKnown RBP17.51■□□□□ 0.39
USB1-214ENST00000568848 PDHBP11177 359 aa17.51■□□□□ 0.39
USB1-214ENST00000568848 LY6KQ17RY6 165 aa17.51■□□□□ 0.39
USB1-214ENST00000568848 BTNL9Q6UXG8 535 aa17.51■□□□□ 0.39
USB1-214ENST00000568848 ZNF589Q86UQ0 364 aaPredicted RBP17.51■□□□□ 0.39
USB1-214ENST00000568848 TBC1D10CQ8IV04 446 aa17.51■□□□□ 0.39
USB1-214ENST00000568848 WNT8BQ93098 351 aa17.51■□□□□ 0.39
USB1-214ENST00000568848 UBA5Q9GZZ9 404 aa17.51■□□□□ 0.39
USB1-214ENST00000568848 C11orf16Q9NQ32 467 aa17.51■□□□□ 0.39
USB1-214ENST00000568848 ADD3Q9UEY8 706 aaKnown RBP17.51■□□□□ 0.39
USB1-214ENST00000568848 SALL3Q9BXA9 1300 aa17.5■□□□□ 0.39
USB1-214ENST00000568848 ORC4O43929 436 aa17.5■□□□□ 0.39
USB1-214ENST00000568848 SUPT20HL2P0C7V6 817 aa17.5■□□□□ 0.39
USB1-214ENST00000568848 TOP1P11387 765 aaKnown RBP17.5■□□□□ 0.39
USB1-214ENST00000568848 MX1P20591 662 aa17.5■□□□□ 0.39
USB1-214ENST00000568848 EDNRBP24530 442 aa17.5■□□□□ 0.39
USB1-214ENST00000568848 WDR5P61964 334 aaKnown RBP17.5■□□□□ 0.39
USB1-214ENST00000568848 PTGISQ16647 500 aa17.5■□□□□ 0.39
USB1-214ENST00000568848 SEPT14Q6ZU15 432 aa17.5■□□□□ 0.39
USB1-214ENST00000568848 RETREG2Q8NC44 543 aa17.5■□□□□ 0.39
USB1-214ENST00000568848 SLC9A7Q96T83 725 aa17.5■□□□□ 0.39
USB1-214ENST00000568848 CHMP4BQ9H444 224 aaKnown RBP17.5■□□□□ 0.39
USB1-214ENST00000568848 NOD1Q9Y239 953 aa17.5■□□□□ 0.39
USB1-214ENST00000568848 A6NJR5 290 aa17.49■□□□□ 0.39
USB1-214ENST00000568848 FGAP02671 866 aa17.49■□□□□ 0.39
USB1-214ENST00000568848 PFKMP08237 780 aa17.49■□□□□ 0.39
USB1-214ENST00000568848 ACTN1P12814 892 aa17.49■□□□□ 0.39
USB1-214ENST00000568848 ZNF200P98182 395 aaPredicted RBP17.49■□□□□ 0.39
USB1-214ENST00000568848 NFRKBQ6P4R8 1299 aa17.49■□□□□ 0.39
USB1-214ENST00000568848 KAT2BQ92831 832 aa17.49■□□□□ 0.39
USB1-214ENST00000568848 TAAR1Q96RJ0 339 aa17.49■□□□□ 0.39
USB1-214ENST00000568848 ANAPC4Q9UJX5 808 aa17.49■□□□□ 0.39
USB1-214ENST00000568848 NEDD4P46934 1319 aa17.48■□□□□ 0.39
USB1-214ENST00000568848 NBNO60934 754 aa17.48■□□□□ 0.39
USB1-214ENST00000568848 MMP3P08254 477 aa17.48■□□□□ 0.39
USB1-214ENST00000568848 POU3F3P20264 500 aaPredicted RBP17.48■□□□□ 0.39
USB1-214ENST00000568848 ARHGAP1Q07960 439 aa17.48■□□□□ 0.39
USB1-214ENST00000568848 ZNF543Q08ER8 600 aa17.48■□□□□ 0.39
USB1-214ENST00000568848 HIC1Q14526 733 aa17.48■□□□□ 0.39
USB1-214ENST00000568848 SCFD2Q8WU76 684 aa17.48■□□□□ 0.39
USB1-214ENST00000568848 ZFP91Q96JP5 570 aaPredicted RBP17.48■□□□□ 0.39
USB1-214ENST00000568848 ALG1Q9BT22 464 aa17.48■□□□□ 0.39
USB1-214ENST00000568848 PITPNM1O00562 1244 aa17.47■□□□□ 0.39
USB1-214ENST00000568848 FGRP09769 529 aa17.47■□□□□ 0.39
USB1-214ENST00000568848 ZNF286BP0CG31 522 aa17.47■□□□□ 0.39
USB1-214ENST00000568848 NMIQ13287 307 aaPredicted RBP17.47■□□□□ 0.39
USB1-214ENST00000568848 LRRFIP1Q32MZ4 808 aaKnown RBP17.47■□□□□ 0.39
USB1-214ENST00000568848 HLA-CQ95604 372 aa17.47■□□□□ 0.39
USB1-214ENST00000568848 SEZ6LQ9BYH1 1024 aa17.47■□□□□ 0.39
USB1-214ENST00000568848 OSBPL7Q9BZF2 842 aa17.47■□□□□ 0.39
USB1-214ENST00000568848 MUC6Q6W4X9 2439 aa17.46■□□□□ 0.39
USB1-214ENST00000568848 RFC2P35250 354 aa17.46■□□□□ 0.39
USB1-214ENST00000568848 MBTPS1Q14703 1052 aa17.46■□□□□ 0.39
USB1-214ENST00000568848 CCDC62Q6P9F0 684 aa17.46■□□□□ 0.39
USB1-214ENST00000568848 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.46■□□□□ 0.39
USB1-214ENST00000568848 LRRC8DQ7L1W4 858 aa17.46■□□□□ 0.39
USB1-214ENST00000568848 C1QTNF1Q9BXJ1 281 aa17.46■□□□□ 0.39
USB1-214ENST00000568848 SUGCTQ9HAC7 445 aa17.46■□□□□ 0.39
USB1-214ENST00000568848 HDAC6Q9UBN7 1215 aa17.46■□□□□ 0.39
USB1-214ENST00000568848 KCNJ6P48051 423 aa17.45■□□□□ 0.38
USB1-214ENST00000568848 BFSP2Q13515 415 aa17.45■□□□□ 0.38
USB1-214ENST00000568848 AAK1Q2M2I8 961 aa17.45■□□□□ 0.38
USB1-214ENST00000568848 PHOSPHO2Q8TCD6 241 aa17.45■□□□□ 0.38
USB1-214ENST00000568848 SYTL5Q8TDW5 730 aaPredicted RBP17.45■□□□□ 0.38
USB1-214ENST00000568848 ZBED2Q9BTP6 218 aa17.45■□□□□ 0.38
USB1-214ENST00000568848 KIAA1217Q5T5P2 1943 aa17.45■□□□□ 0.38
USB1-214ENST00000568848 HSPD1P10809 573 aaKnown RBP17.44■□□□□ 0.38
USB1-214ENST00000568848 CKBP12277 381 aa17.44■□□□□ 0.38
USB1-214ENST00000568848 SELPP16109 830 aa17.44■□□□□ 0.38
USB1-214ENST00000568848 EIF2AK2P19525 551 aaKnown RBP17.44■□□□□ 0.38
USB1-214ENST00000568848 CDC37Q16543 378 aaPredicted RBP17.44■□□□□ 0.38
USB1-214ENST00000568848 PPP4R3BQ5MIZ7 849 aa17.44■□□□□ 0.38
USB1-214ENST00000568848 ANKRD45Q5TZF3 282 aa17.44■□□□□ 0.38
USB1-214ENST00000568848 TRAF7Q6Q0C0 670 aa17.44■□□□□ 0.38
USB1-214ENST00000568848 C17orf80Q9BSJ5 609 aa17.44■□□□□ 0.38
USB1-214ENST00000568848 MYH7BA7E2Y1 1941 aa17.44■□□□□ 0.38
USB1-214ENST00000568848 RAD50Q92878 1312 aa17.44■□□□□ 0.38
USB1-214ENST00000568848 MYO7AQ13402 2215 aa17.43■□□□□ 0.38
USB1-214ENST00000568848 LINC01553A4QN01 128 aa17.43■□□□□ 0.38
USB1-214ENST00000568848 KIF28PB7ZC32 967 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms