RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 RPS6P62753 249 aaKnown RBP18.51■□□□□ 0.55
HERPUD1-215ENST00000568676 GPATCH4Q5T3I0 446 aaKnown RBP18.51■□□□□ 0.55
HERPUD1-215ENST00000568676 VPS53Q5VIR6 699 aa18.51■□□□□ 0.55
HERPUD1-215ENST00000568676 SLC30A10Q6XR72 485 aa18.51■□□□□ 0.55
HERPUD1-215ENST00000568676 MICALL1Q8N3F8 863 aa18.51■□□□□ 0.55
HERPUD1-215ENST00000568676 CAGE1Q8TC20 777 aa18.51■□□□□ 0.55
HERPUD1-215ENST00000568676 OTUD7AQ8TE49 926 aaPredicted RBP18.51■□□□□ 0.55
HERPUD1-215ENST00000568676 GPCPD1Q9NPB8 672 aa18.51■□□□□ 0.55
HERPUD1-215ENST00000568676 NOD1Q9Y239 953 aa18.51■□□□□ 0.55
HERPUD1-215ENST00000568676 MTCH2Q9Y6C9 303 aa18.51■□□□□ 0.55
HERPUD1-215ENST00000568676 SCN10AQ9Y5Y9 1956 aa18.51■□□□□ 0.55
HERPUD1-215ENST00000568676 FGAP02671 866 aa18.5■□□□□ 0.55
HERPUD1-215ENST00000568676 SNHG28P0DPA3 235 aa18.5■□□□□ 0.55
HERPUD1-215ENST00000568676 TXNP10599 105 aaKnown RBP18.5■□□□□ 0.55
HERPUD1-215ENST00000568676 ZNF543Q08ER8 600 aa18.5■□□□□ 0.55
HERPUD1-215ENST00000568676 SKIV2LQ15477 1246 aaKnown RBP18.5■□□□□ 0.55
HERPUD1-215ENST00000568676 MCMDC2Q4G0Z9 681 aa18.5■□□□□ 0.55
HERPUD1-215ENST00000568676 AFAP1L1Q8TED9 768 aa18.5■□□□□ 0.55
HERPUD1-215ENST00000568676 PCDHB15Q9Y5E8 787 aa18.5■□□□□ 0.55
HERPUD1-215ENST00000568676 FRMPD2Q68DX3 1309 aaPredicted RBP18.49■□□□□ 0.55
HERPUD1-215ENST00000568676 RRP12Q5JTH9 1297 aaKnown RBP18.49■□□□□ 0.55
HERPUD1-215ENST00000568676 SESTD1Q86VW0 696 aa18.49■□□□□ 0.55
HERPUD1-215ENST00000568676 HERC6Q8IVU3 1022 aa18.49■□□□□ 0.55
HERPUD1-215ENST00000568676 FTOQ9C0B1 505 aaKnown RBP eCLIP18.49■□□□□ 0.55
HERPUD1-215ENST00000568676 RNF41Q9H4P4 317 aaPredicted RBP18.49■□□□□ 0.55
HERPUD1-215ENST00000568676 CHD7Q9P2D1 2997 aa18.49■□□□□ 0.55
HERPUD1-215ENST00000568676 TANC1Q9C0D5 1861 aa18.48■□□□□ 0.55
HERPUD1-215ENST00000568676 KCNJ6P48051 423 aa18.48■□□□□ 0.55
HERPUD1-215ENST00000568676 CCDC178Q5BJE1 867 aa18.48■□□□□ 0.55
HERPUD1-215ENST00000568676 MFSD6Q6ZSS7 791 aa18.48■□□□□ 0.55
HERPUD1-215ENST00000568676 NCOR1O75376 2440 aa18.47■□□□□ 0.55
HERPUD1-215ENST00000568676 HSPD1P10809 573 aaKnown RBP18.47■□□□□ 0.55
HERPUD1-215ENST00000568676 MFAP1P55081 439 aaKnown RBP18.47■□□□□ 0.55
HERPUD1-215ENST00000568676 TAP1Q03518 808 aa18.47■□□□□ 0.55
HERPUD1-215ENST00000568676 PTGISQ16647 500 aa18.47■□□□□ 0.55
HERPUD1-215ENST00000568676 DGKHQ86XP1 1220 aa18.47■□□□□ 0.55
HERPUD1-215ENST00000568676 LMCD1Q9NZU5 365 aa18.47■□□□□ 0.55
HERPUD1-215ENST00000568676 GH1P01241 217 aa18.46■□□□□ 0.55
HERPUD1-215ENST00000568676 CASTP20810 708 aaKnown RBP18.46■□□□□ 0.55
HERPUD1-215ENST00000568676 TFF2Q03403 129 aa18.46■□□□□ 0.55
HERPUD1-215ENST00000568676 RBL2Q08999 1139 aa18.46■□□□□ 0.55
HERPUD1-215ENST00000568676 CCDC62Q6P9F0 684 aa18.46■□□□□ 0.55
HERPUD1-215ENST00000568676 MCF2L2Q86YR7 1114 aa18.46■□□□□ 0.55
HERPUD1-215ENST00000568676 NSUN6Q8TEA1 469 aaKnown RBP18.46■□□□□ 0.55
HERPUD1-215ENST00000568676 ESR2Q92731 530 aa18.46■□□□□ 0.55
HERPUD1-215ENST00000568676 IWS1Q96ST2 819 aa18.46■□□□□ 0.55
HERPUD1-215ENST00000568676 ARIH1Q9Y4X5 557 aaPredicted RBP18.46■□□□□ 0.55
HERPUD1-215ENST00000568676 ABCB11O95342 1321 aa18.46■□□□□ 0.55
HERPUD1-215ENST00000568676 TLL1O43897 1013 aa18.45■□□□□ 0.54
HERPUD1-215ENST00000568676 EFCAB14O75071 495 aa18.45■□□□□ 0.54
HERPUD1-215ENST00000568676 PLA2G5P39877 138 aa18.45■□□□□ 0.54
HERPUD1-215ENST00000568676 PDE1AP54750 535 aa18.45■□□□□ 0.54
HERPUD1-215ENST00000568676 ANKRD45Q5TZF3 282 aa18.45■□□□□ 0.54
HERPUD1-215ENST00000568676 ARNTL2Q8WYA1 636 aa18.45■□□□□ 0.54
HERPUD1-215ENST00000568676 COPS5Q92905 334 aa18.45■□□□□ 0.54
HERPUD1-215ENST00000568676 HLA-CQ95604 372 aa18.45■□□□□ 0.54
HERPUD1-215ENST00000568676 KATNAL1Q9BW62 490 aa18.45■□□□□ 0.54
HERPUD1-215ENST00000568676 SCN5AQ14524 2016 aa18.44■□□□□ 0.54
HERPUD1-215ENST00000568676 A0A0D9SFI3 127 aa18.44■□□□□ 0.54
HERPUD1-215ENST00000568676 MMP3P08254 477 aa18.44■□□□□ 0.54
HERPUD1-215ENST00000568676 SELPP16109 830 aa18.44■□□□□ 0.54
HERPUD1-215ENST00000568676 KCNQ1P51787 676 aa18.44■□□□□ 0.54
HERPUD1-215ENST00000568676 STXBP2Q15833 593 aa18.44■□□□□ 0.54
HERPUD1-215ENST00000568676 IQCA1Q86XH1 822 aa18.44■□□□□ 0.54
HERPUD1-215ENST00000568676 FAM227BQ96M60 508 aa18.44■□□□□ 0.54
HERPUD1-215ENST00000568676 CCDC171Q6TFL3 1326 aa18.44■□□□□ 0.54
HERPUD1-215ENST00000568676 XIRP2A4UGR9 3374 aa18.44■□□□□ 0.54
HERPUD1-215ENST00000568676 RFXAPO00287 272 aa18.43■□□□□ 0.54
HERPUD1-215ENST00000568676 ARIH2O95376 493 aa18.43■□□□□ 0.54
HERPUD1-215ENST00000568676 DGKDQ16760 1214 aa18.43■□□□□ 0.54
HERPUD1-215ENST00000568676 USH1GQ495M9 461 aa18.43■□□□□ 0.54
HERPUD1-215ENST00000568676 CNKSR3Q6P9H4 555 aa18.43■□□□□ 0.54
HERPUD1-215ENST00000568676 LRRC8DQ7L1W4 858 aa18.43■□□□□ 0.54
HERPUD1-215ENST00000568676 AFG1LQ8WV93 481 aa18.43■□□□□ 0.54
HERPUD1-215ENST00000568676 EMID1Q96A84 441 aaPredicted RBP18.43■□□□□ 0.54
HERPUD1-215ENST00000568676 FAM122AQ96E09 287 aa18.43■□□□□ 0.54
HERPUD1-215ENST00000568676 CERS4Q9HA82 394 aa18.43■□□□□ 0.54
HERPUD1-215ENST00000568676 BDP1A6H8Y1 2624 aa18.43■□□□□ 0.54
HERPUD1-215ENST00000568676 ABHD14A-ACY1A0A1B0GW23 586 aa18.42■□□□□ 0.54
HERPUD1-215ENST00000568676 CXCL10P02778 98 aa18.42■□□□□ 0.54
HERPUD1-215ENST00000568676 HAND2P61296 217 aa18.42■□□□□ 0.54
HERPUD1-215ENST00000568676 WDR5P61964 334 aaKnown RBP18.42■□□□□ 0.54
HERPUD1-215ENST00000568676 ARHGAP1Q07960 439 aa18.42■□□□□ 0.54
HERPUD1-215ENST00000568676 GRB10Q13322 594 aa18.42■□□□□ 0.54
HERPUD1-215ENST00000568676 CDC37Q16543 378 aaPredicted RBP18.42■□□□□ 0.54
HERPUD1-215ENST00000568676 ASPRV1Q53RT3 343 aa18.42■□□□□ 0.54
HERPUD1-215ENST00000568676 NECAB3Q96P71 396 aaPredicted RBP18.42■□□□□ 0.54
HERPUD1-215ENST00000568676 ZBED2Q9BTP6 218 aa18.42■□□□□ 0.54
HERPUD1-215ENST00000568676 GTF2IRD1Q9UHL9 959 aa18.42■□□□□ 0.54
HERPUD1-215ENST00000568676 MRPL11Q9Y3B7 192 aaKnown RBP18.42■□□□□ 0.54
HERPUD1-215ENST00000568676 TRANK1O15050 2925 aa18.42■□□□□ 0.54
HERPUD1-215ENST00000568676 EPOPA6NHQ4 379 aa18.41■□□□□ 0.54
HERPUD1-215ENST00000568676 ZNF213O14771 459 aa18.41■□□□□ 0.54
HERPUD1-215ENST00000568676 GDF6Q6KF10 455 aaPredicted RBP18.41■□□□□ 0.54
HERPUD1-215ENST00000568676 SEPT14Q6ZU15 432 aa18.41■□□□□ 0.54
HERPUD1-215ENST00000568676 ZNF589Q86UQ0 364 aaPredicted RBP18.41■□□□□ 0.54
HERPUD1-215ENST00000568676 C7orf31Q8N865 590 aa18.41■□□□□ 0.54
HERPUD1-215ENST00000568676 PNMA1Q8ND90 353 aa18.41■□□□□ 0.54
HERPUD1-215ENST00000568676 SYTL5Q8TDW5 730 aaPredicted RBP18.41■□□□□ 0.54
HERPUD1-215ENST00000568676 ANKS1AQ92625 1134 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms