RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 MRPL12P52815 198 aaKnown RBP8.5□□□□□ -1.05
ATXN3-250ENST00000568290 DYNLL1P63167 89 aaKnown RBP8.5□□□□□ -1.05
ATXN3-250ENST00000568290 ASIC1P78348 528 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 NAA30Q147X3 362 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-250ENST00000568290 ERFEQ4G0M1 354 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 CCDC181Q5TID7 509 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 PAPD7Q5XG87 772 aaKnown RBP8.5□□□□□ -1.05
ATXN3-250ENST00000568290 ADGRD1Q6QNK2 874 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 RAD9BQ6WBX8 426 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 UNC13DQ70J99 1090 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 APTXQ7Z2E3 356 aaKnown RBP8.5□□□□□ -1.05
ATXN3-250ENST00000568290 HEATR3Q7Z4Q2 680 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 GRAMD1CQ8IYS0 662 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 REXO1Q8N1G1 1221 aaKnown RBP8.5□□□□□ -1.05
ATXN3-250ENST00000568290 GUF1Q8N442 669 aaKnown RBP8.5□□□□□ -1.05
ATXN3-250ENST00000568290 SYN2Q92777 582 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-250ENST00000568290 CALR3Q96L12 384 aaKnown RBP8.5□□□□□ -1.05
ATXN3-250ENST00000568290 FUT8Q9BYC5 575 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 UBXN6Q9BZV1 441 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 ZNF446Q9NWS9 450 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 TAB2Q9NYJ8 693 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-250ENST00000568290 PCDH10Q9P2E7 1040 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 ANKIB1Q9P2G1 1089 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 SWAP70Q9UH65 585 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 RABGEF1Q9UJ41 708 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 FAM184BQ9ULE4 1060 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 DLEC1Q9Y238 1755 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 SPATA31A5Q5VU36 1347 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 SPATA31A7Q8IWB4 1347 aa8.5□□□□□ -1.05
ATXN3-250ENST00000568290 ZNF335Q9H4Z2 1342 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-250ENST00000568290 MYH6P13533 1939 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 SSU72P8A0A1W2PR75 194 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 PALM3A6NDB9 673 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-250ENST00000568290 KLRF2D3W0D1 207 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 RPS6KA5O75582 802 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 PRDM1O75626 825 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 HNRNPH3P31942 346 aaKnown RBP8.49□□□□□ -1.05
ATXN3-250ENST00000568290 ACTN2P35609 894 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 FXR1P51114 621 aaKnown RBP eCLIP8.49□□□□□ -1.05
ATXN3-250ENST00000568290 CDR1P51861 262 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 VAV2P52735 878 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 HSPA2P54652 639 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 GRIN1Q05586 938 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 GRAPQ13588 217 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 MAN2A1Q16706 1144 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 GPATCH4Q5T3I0 446 aaKnown RBP8.49□□□□□ -1.05
ATXN3-250ENST00000568290 TRAPPC11Q7Z392 1133 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 VPS36Q86VN1 386 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 SPATS2Q86XZ4 545 aaKnown RBP8.49□□□□□ -1.05
ATXN3-250ENST00000568290 ZSCAN29Q8IWY8 852 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-250ENST00000568290 CMTR1Q8N1G2 835 aaKnown RBP8.49□□□□□ -1.05
ATXN3-250ENST00000568290 NEDD1Q8NHV4 660 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 ERMNQ8TAM6 284 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 GRAPLQ8TC17 118 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-250ENST00000568290 CCDC102AQ96A19 550 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 CEP63Q96MT8 703 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 DESI2Q9BSY9 194 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 INCENPQ9NQS7 918 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 GUCA1BQ9UMX6 200 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 PCDHA6Q9UN73 950 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 L1RE1Q9UN81 338 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 STX8Q9UNK0 236 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 PCDHA8Q9Y5H6 950 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 BZW2Q9Y6E2 419 aaKnown RBP8.49□□□□□ -1.05
ATXN3-250ENST00000568290 WNK3Q9BYP7 1800 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 PHLPP1O60346 1717 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 DOT1LQ8TEK3 1739 aa8.49□□□□□ -1.05
ATXN3-250ENST00000568290 ECM29Q5VYK3 1845 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 SMCO2A6NFE2 343 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 STXBP3O00186 592 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 POLR3GO15318 223 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-250ENST00000568290 CCNT1O60563 726 aaKnown RBP8.48□□□□□ -1.05
ATXN3-250ENST00000568290 EPS15P42566 896 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 AARSP49588 968 aaKnown RBP eCLIP8.48□□□□□ -1.05
ATXN3-250ENST00000568290 ADCY7P51828 1080 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 USP14P54578 494 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 ST5P78524 1137 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 SLC20A2Q08357 652 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 PPFIA1Q13136 1202 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 NNTQ13423 1086 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 CALCRLQ16602 461 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 SLC9C1Q4G0N8 1177 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 HSP90AA4PQ58FG1 418 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 BEND6Q5SZJ8 279 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-250ENST00000568290 HAUS3Q68CZ6 603 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 C16orf86Q6ZW13 317 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 USP49Q70CQ1 688 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 CACNA2D4Q7Z3S7 1137 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 CCDC65Q8IXS2 484 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 C4orf32Q8N8J7 132 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 NEK11Q8NG66 645 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 ZNF507Q8TCN5 953 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 LMBR1Q8WVP7 490 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 RPGRQ92834 1020 aaKnown RBP8.48□□□□□ -1.05
ATXN3-250ENST00000568290 RBM17Q96I25 401 aaKnown RBP8.48□□□□□ -1.05
ATXN3-250ENST00000568290 CNOT6LQ96LI5 555 aaKnown RBP8.48□□□□□ -1.05
ATXN3-250ENST00000568290 CCDC17Q96LX7 622 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 SLF1Q9BQI6 1058 aa8.48□□□□□ -1.05
ATXN3-250ENST00000568290 MXD3Q9BW11 206 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms