RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 SUGCTQ9HAC7 445 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 PARP3Q9Y6F1 533 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 TMEM2Q9UHN6 1383 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 ANO9A1A5B4 782 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 PTPREP23469 700 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 SERPINB6P35237 376 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 ARHGEF18Q6ZSZ5 1173 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 TTLL7Q6ZT98 887 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 KCNV2Q8TDN2 545 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 GRK7Q8WTQ7 553 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 THOC1Q96FV9 657 aaKnown RBP13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 PBKQ96KB5 322 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 ADAMTS1Q9UHI8 967 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 SEMA3EO15041 775 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 N4BP1O75113 896 aaKnown RBP13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 ATP1A1P05023 1023 aaKnown RBP13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 EIF3BP55884 814 aaKnown RBP13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 MAGOHP61326 146 aaKnown RBP13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 CCDC14Q49A88 953 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 CYP4F22Q6NT55 531 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 TAB3Q8N5C8 712 aaPredicted RBP13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 PNMA1Q8ND90 353 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 ACSBG1Q96GR2 724 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 PUS7LQ9H0K6 701 aaKnown RBP13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 THAP9Q9H5L6 903 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 MLXIPQ9HAP2 919 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 PSD3Q9NYI0 1048 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 PCDHA12Q9UN75 941 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 BZW2Q9Y6E2 419 aaKnown RBP13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 FOXN1O15353 648 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 GOLGA8HP0CJ92 632 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 RCN2Q14257 317 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 RASA3Q14644 834 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 UBE3CQ15386 1083 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 GLE1Q53GS7 698 aaKnown RBP13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 PI16Q6UXB8 463 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 DDX23Q9BUQ8 820 aaKnown RBP13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 ZMYND12Q9H0C1 365 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 RABGAP1Q9Y3P9 1069 aa13.53□□□□□ -0.24
CSPG4P13-202ENST00000567704 PRR29P0C7W0 189 aa13.52□□□□□ -0.24
CSPG4P13-202ENST00000567704 IL2RBP14784 551 aa13.52□□□□□ -0.24
CSPG4P13-202ENST00000567704 CUL1Q13616 776 aa13.52□□□□□ -0.24
CSPG4P13-202ENST00000567704 SLMAPQ14BN4 828 aa13.52□□□□□ -0.24
CSPG4P13-202ENST00000567704 NFRKBQ6P4R8 1299 aa13.52□□□□□ -0.24
CSPG4P13-202ENST00000567704 NDST4Q9H3R1 872 aa13.52□□□□□ -0.24
CSPG4P13-202ENST00000567704 FHOD1Q9Y613 1164 aa13.52□□□□□ -0.24
CSPG4P13-202ENST00000567704 ABCC3O15438 1527 aa13.52□□□□□ -0.24
CSPG4P13-202ENST00000567704 PDHA1P08559 390 aa13.52□□□□□ -0.24
CSPG4P13-202ENST00000567704 CAPRIN2Q6IMN6 1127 aaKnown RBP13.52□□□□□ -0.24
CSPG4P13-202ENST00000567704 ANKRD35Q8N283 1001 aa13.52□□□□□ -0.24
CSPG4P13-202ENST00000567704 SH2D3CQ8N5H7 860 aa13.52□□□□□ -0.24
CSPG4P13-202ENST00000567704 NCOA3Q9Y6Q9 1424 aa13.52□□□□□ -0.24
CSPG4P13-202ENST00000567704 ADAMTS2O95450 1211 aa13.52□□□□□ -0.25
CSPG4P13-202ENST00000567704 TRAPPC10P48553 1259 aa13.52□□□□□ -0.25
CSPG4P13-202ENST00000567704 CORO7P57737 925 aa13.52□□□□□ -0.25
CSPG4P13-202ENST00000567704 MAP3K21Q5TCX8 1036 aa13.52□□□□□ -0.25
CSPG4P13-202ENST00000567704 GJA10Q969M2 543 aa13.52□□□□□ -0.25
CSPG4P13-202ENST00000567704 TFCP2L1Q9NZI6 479 aa13.52□□□□□ -0.25
CSPG4P13-202ENST00000567704 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
CSPG4P13-202ENST00000567704 PRDM15P57071 1507 aaPredicted RBP13.52□□□□□ -0.25
CSPG4P13-202ENST00000567704 ELF1P32519 619 aa13.52□□□□□ -0.25
CSPG4P13-202ENST00000567704 FKBP3Q00688 224 aaKnown RBP13.52□□□□□ -0.25
CSPG4P13-202ENST00000567704 KIFC2Q96AC6 838 aa13.52□□□□□ -0.25
CSPG4P13-202ENST00000567704 ZSWIM5Q9P217 1185 aa13.52□□□□□ -0.25
CSPG4P13-202ENST00000567704 INTUQ9ULD6 942 aa13.52□□□□□ -0.25
CSPG4P13-202ENST00000567704 TRIM49BA6NDI0 452 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 PHKA1P46020 1223 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 HDLBPQ00341 1268 aaKnown RBP13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 CADPS2Q86UW7 1296 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 TMEM51Q9NW97 253 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 CROCC2H7BZ55 1655 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 NCK2O43639 380 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 PHBP35232 272 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 SMTNP53814 917 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 SNX1Q13596 522 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 CASC4Q6P4E1 433 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 MAPKAPK5Q8IW41 473 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 MMS19Q96T76 1030 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 MROH5Q6ZUA9 1318 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 TTC26A0AVF1 554 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 PRAMEF22A3QJZ6 481 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 H2AFXP16104 143 aaPredicted RBP13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 ATF7P17544 494 aaPredicted RBP13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 TCIRG1Q13488 830 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 TMED2Q15363 201 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 GEN1Q17RS7 908 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 ANKRD2Q9GZV1 360 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 Q9H521 79 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 MAGEF1Q9HAY2 307 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 METTL14Q9HCE5 456 aaKnown RBP13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 ZNF148Q9UQR1 794 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 CFAP65Q6ZU64 1925 aaKnown RBP13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 KLRF2D3W0D1 207 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 PALMO75781 387 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 NR2F2P24468 414 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 PTPN12Q05209 780 aaKnown RBP13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 CUL4BQ13620 913 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 HSP90AA5PQ58FG0 334 aa13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 LARP4BQ92615 738 aaKnown RBP13.51□□□□□ -0.25
CSPG4P13-202ENST00000567704 ATP6V1G3Q96LB4 118 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms